Click here to switch to the map view.

The map label for this gene is malE [H]

Identifier: 150396906

GI number: 150396906

Start: 1780799

End: 1782067

Strand: Reverse

Name: malE [H]

Synonym: Smed_1702

Alternate gene names: 150396906

Gene position: 1782067-1780799 (Counterclockwise)

Preceding gene: 150396907

Following gene: 150396905

Centisome position: 47.12

GC content: 59.1

Gene sequence:

>1269_bases
ATGATACGCATCGATCTCAAAAGAATTTGCAGCGTGGCGGTGATTGCCATGCTGGCAACGCCGGCGCTTGGGGAGCCCGT
GACCATCGCGGTATGGATGCATGAACATCCACCAAGACTGGCGCTGGACGAGAAGTTGGTCGCCGCATTCGAGCAGGCCA
ATCCCGACATAAATGTCGACCTGACCATTTTCCCGAACGCTCAGTTCGAGCAGCGGCTTCAGATTGGATTCGCCAGCGGC
GACGGGCCGGACCTGTTCAACAGTGGCTCGTTCAATATCGGGCAATATCGCCATTCCCGATTGTTGGCTCCGGTCGATCT
GAAGACGGTGGGTGTCGATGATTTGAATGAACTCAAGGCGAAATTCGGGATCGGCATCGCCGGCGCCGAGTTTGACGGTG
TCGCTTACGGACTGCCGACGGAGGTGAGCAATTATGCGTGCGTCGCCAACAATGCGCTGTGGCGTACGGCGGGGCTCGAT
CCCGCAAAAGATGCACCGGCCACTTGGGAGGAGATGGTTGAAGTCGCCCGCAAGCTGACCCGCCGGGATGACGGAAATGT
TCCGGTCGTACGCGGCTTCGACTTCAACTGGTCCGACCCGATCTTCATGTGGTTGACGTTCAACGCGATGGTGAACCAGC
TTGGCGGCACCGTCATCGATGAGGCGGCGTTGACTGCGGATTTCGACTCGGTTCAGGTCCGCACGGTCATGGACTTCTGG
AGCGCCTGGGCCAATGATTGGGCACTGGGCGGACCGCAATATACCGCGAGCCGCGATGCTTTTCTGGCTGGCGAACTGGC
TACGGAATGCACCTTCGGCTCATGGGGACGCGATCAGTTCAAAGCGGCAGGGATCGATTATACCTTCTTTCCTGTACCGC
GCTGGCGTGAAGGAACGGTCGATACCGGTTTCAACGCCTATGCCTATTACATGATGGTCAATGCCAATGCCCCGCCGGAA
CGCCAGGAGGCAGCGTGGCGCTTTGCCGCGTTCTATGCGAGCCAGGGCGAGGCCCTCTTCGAAGAAGCTGGGCTCTTCAC
CACGGTGCCGGCAGTCCAGGAGCTGGAAAGCTATACATCCGATGGTAGTAACACGATCTTCACCGACGAGCTGGACAAGG
CGGTGTTTTCGCCCCGTGTGCCGGGTTTCAACGAGCTTGGCGACGCTCTGGCTCGCGCCCGCGACCGGATCGTTATAAAC
CATGAAGATGCTTCCGCCGCTCTCGGCGAGCTCGAGGCTGAGGCGTCGACCATTCTCGGACGGTTTTGA

Upstream 100 bases:

>100_bases
TCACTGCGGACGGTCAATATCGATCTAGCGAATACGGTATACCGTATTGCAAGACGCGGCTGCTTATGGCAGGGTGCGCC
CAATGTTGAGGGAGGACTGA

Downstream 100 bases:

>100_bases
CGCATGGCGATGAACGACATACGACAAATGGCTGGGAGGTCCGTAACGGACCTCCCAGCTCCCTCCCTGACCAGGCACCG
AAAATGGTGGGGTCTGCTGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: MMBP; Maltodextrin-binding protein [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MIRIDLKRICSVAVIAMLATPALGEPVTIAVWMHEHPPRLALDEKLVAAFEQANPDINVDLTIFPNAQFEQRLQIGFASG
DGPDLFNSGSFNIGQYRHSRLLAPVDLKTVGVDDLNELKAKFGIGIAGAEFDGVAYGLPTEVSNYACVANNALWRTAGLD
PAKDAPATWEEMVEVARKLTRRDDGNVPVVRGFDFNWSDPIFMWLTFNAMVNQLGGTVIDEAALTADFDSVQVRTVMDFW
SAWANDWALGGPQYTASRDAFLAGELATECTFGSWGRDQFKAAGIDYTFFPVPRWREGTVDTGFNAYAYYMMVNANAPPE
RQEAAWRFAAFYASQGEALFEEAGLFTTVPAVQELESYTSDGSNTIFTDELDKAVFSPRVPGFNELGDALARARDRIVIN
HEDASAALGELEAEASTILGRF

Sequences:

>Translated_422_residues
MIRIDLKRICSVAVIAMLATPALGEPVTIAVWMHEHPPRLALDEKLVAAFEQANPDINVDLTIFPNAQFEQRLQIGFASG
DGPDLFNSGSFNIGQYRHSRLLAPVDLKTVGVDDLNELKAKFGIGIAGAEFDGVAYGLPTEVSNYACVANNALWRTAGLD
PAKDAPATWEEMVEVARKLTRRDDGNVPVVRGFDFNWSDPIFMWLTFNAMVNQLGGTVIDEAALTADFDSVQVRTVMDFW
SAWANDWALGGPQYTASRDAFLAGELATECTFGSWGRDQFKAAGIDYTFFPVPRWREGTVDTGFNAYAYYMMVNANAPPE
RQEAAWRFAAFYASQGEALFEEAGLFTTVPAVQELESYTSDGSNTIFTDELDKAVFSPRVPGFNELGDALARARDRIVIN
HEDASAALGELEAEASTILGRF
>Mature_422_residues
MIRIDLKRICSVAVIAMLATPALGEPVTIAVWMHEHPPRLALDEKLVAAFEQANPDINVDLTIFPNAQFEQRLQIGFASG
DGPDLFNSGSFNIGQYRHSRLLAPVDLKTVGVDDLNELKAKFGIGIAGAEFDGVAYGLPTEVSNYACVANNALWRTAGLD
PAKDAPATWEEMVEVARKLTRRDDGNVPVVRGFDFNWSDPIFMWLTFNAMVNQLGGTVIDEAALTADFDSVQVRTVMDFW
SAWANDWALGGPQYTASRDAFLAGELATECTFGSWGRDQFKAAGIDYTFFPVPRWREGTVDTGFNAYAYYMMVNANAPPE
RQEAAWRFAAFYASQGEALFEEAGLFTTVPAVQELESYTSDGSNTIFTDELDKAVFSPRVPGFNELGDALARARDRIVIN
HEDASAALGELEAEASTILGRF

Specific function: Involved in an abc transport system for maltotriose [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006060
- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46333; Mature: 46333

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIDLKRICSVAVIAMLATPALGEPVTIAVWMHEHPPRLALDEKLVAAFEQANPDINVD
CEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE
LTIFPNAQFEQRLQIGFASGDGPDLFNSGSFNIGQYRHSRLLAPVDLKTVGVDDLNELKA
EEECCCCCHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCHHHHHH
KFGIGIAGAEFDGVAYGLPTEVSNYACVANNALWRTAGLDPAKDAPATWEEMVEVARKLT
HHCCEEECCCCCCEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
RRDDGNVPVVRGFDFNWSDPIFMWLTFNAMVNQLGGTVIDEAALTADFDSVQVRTVMDFW
CCCCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHCCCEEHHHHHCCCCCCCHHHHHHHHH
SAWANDWALGGPQYTASRDAFLAGELATECTFGSWGRDQFKAAGIDYTFFPVPRWREGTV
HHHHCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCCCCCC
DTGFNAYAYYMMVNANAPPERQEAAWRFAAFYASQGEALFEEAGLFTTVPAVQELESYTS
CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCEEECHHHHHHHHHHC
DGSNTIFTDELDKAVFSPRVPGFNELGDALARARDRIVINHEDASAALGELEAEASTILG
CCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHC
RF
CC
>Mature Secondary Structure
MIRIDLKRICSVAVIAMLATPALGEPVTIAVWMHEHPPRLALDEKLVAAFEQANPDINVD
CEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE
LTIFPNAQFEQRLQIGFASGDGPDLFNSGSFNIGQYRHSRLLAPVDLKTVGVDDLNELKA
EEECCCCCHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCHHHHHH
KFGIGIAGAEFDGVAYGLPTEVSNYACVANNALWRTAGLDPAKDAPATWEEMVEVARKLT
HHCCEEECCCCCCEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
RRDDGNVPVVRGFDFNWSDPIFMWLTFNAMVNQLGGTVIDEAALTADFDSVQVRTVMDFW
CCCCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHCCCEEHHHHHCCCCCCCHHHHHHHHH
SAWANDWALGGPQYTASRDAFLAGELATECTFGSWGRDQFKAAGIDYTFFPVPRWREGTV
HHHHCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCCCCCC
DTGFNAYAYYMMVNANAPPERQEAAWRFAAFYASQGEALFEEAGLFTTVPAVQELESYTS
CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCEEECHHHHHHHHHHC
DGSNTIFTDELDKAVFSPRVPGFNELGDALARARDRIVINHEDASAALGELEAEASTILG
CCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHC
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]