| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150396876
Identifier: 150396876
GI number: 150396876
Start: 1757940
End: 1758395
Strand: Reverse
Name: 150396876
Synonym: Smed_1671
Alternate gene names: NA
Gene position: 1758395-1757940 (Counterclockwise)
Preceding gene: 150396877
Following gene: 150396875
Centisome position: 46.49
GC content: 63.16
Gene sequence:
>456_bases GTGCGTGCAATTTCTGACGAACATGCATCCATCATCAAGGCCGCAACGGCTGCGGCTTACGAGGCGCTCGGCGGGGTGAG CCGGGCAGCCGAGGCGCTCGGAGTCGCTTCCTCGACGCTCACCAAATACGCCTCCATGGGCGAGGAATGGCGCGACAGCT TCATCCGCCTCGATCTTGCCGTCGAGCTAGACCGGCGATGCGATCACCCGTTCTTGCTTACCGCCATGTCGCGGATAGTG AAGGACGAACACGTCTCCAGCTTCGGAGTGGTCACCGCCAGCGCAGTCCTGCGCCTCGACGGCGTCCTCGACGATGTCGT ACGTGCGGTCGCTGCGGCGCTCGAAGATGACGATCACATCGACGCTGCGGAACGACAAGCTATCCGCAACCGCATCGTTG CGGCTCAACAATATCTGGCCCGCCTCGACGCCATGATGATGGCGGGTGCCCGCTGA
Upstream 100 bases:
>100_bases CCTCCGTGATCTGATGGGCTGACCCTACGCCGCCGGCGCGCGGCCTTCACGGAATCCTTTCGGTTGATTTTTTCCTTGAC CCAAACTCAGAGGTGTTTTC
Downstream 100 bases:
>100_bases TGCATGGCAAACCCAAGAACTCGACCATAACGGTAACGGCCATCTGCGCGCTGTTGCCGGACGACCCGGAAGCAGCCGTC AGCGTCGTCACAGTTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRAISDEHASIIKAATAAAYEALGGVSRAAEALGVASSTLTKYASMGEEWRDSFIRLDLAVELDRRCDHPFLLTAMSRIV KDEHVSSFGVVTASAVLRLDGVLDDVVRAVAAALEDDDHIDAAERQAIRNRIVAAQQYLARLDAMMMAGAR
Sequences:
>Translated_151_residues MRAISDEHASIIKAATAAAYEALGGVSRAAEALGVASSTLTKYASMGEEWRDSFIRLDLAVELDRRCDHPFLLTAMSRIV KDEHVSSFGVVTASAVLRLDGVLDDVVRAVAAALEDDDHIDAAERQAIRNRIVAAQQYLARLDAMMMAGAR >Mature_151_residues MRAISDEHASIIKAATAAAYEALGGVSRAAEALGVASSTLTKYASMGEEWRDSFIRLDLAVELDRRCDHPFLLTAMSRIV KDEHVSSFGVVTASAVLRLDGVLDDVVRAVAAALEDDDHIDAAERQAIRNRIVAAQQYLARLDAMMMAGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16288; Mature: 16288
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAISDEHASIIKAATAAAYEALGGVSRAAEALGVASSTLTKYASMGEEWRDSFIRLDLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VELDRRCDHPFLLTAMSRIVKDEHVSSFGVVTASAVLRLDGVLDDVVRAVAAALEDDDHI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAAERQAIRNRIVAAQQYLARLDAMMMAGAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAISDEHASIIKAATAAAYEALGGVSRAAEALGVASSTLTKYASMGEEWRDSFIRLDLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VELDRRCDHPFLLTAMSRIVKDEHVSSFGVVTASAVLRLDGVLDDVVRAVAAALEDDDHI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAAERQAIRNRIVAAQQYLARLDAMMMAGAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA