Click here to switch to the map view.

The map label for this gene is 150396844

Identifier: 150396844

GI number: 150396844

Start: 1731007

End: 1732131

Strand: Reverse

Name: 150396844

Synonym: Smed_1639

Alternate gene names: NA

Gene position: 1732131-1731007 (Counterclockwise)

Preceding gene: 150396845

Following gene: 150396843

Centisome position: 45.8

GC content: 61.6

Gene sequence:

>1125_bases
ATGACGATACCCTATGTAACCGGCACGGTTTCCGTGACCGCCGGCAGCGCCGTTGTCACCGGCTCCGGGACCGCTTGGGC
CACCGCACTGATCGCCGGCGGGTTCTTCGGCCTCGACAGCAGCAACGGCAACCCGGTCCCGATCCTCTCCGTCGACAGCA
ACACGCAACTGACGCTGGCCAAGCCCTGGCGCGGCACCACGGCGGCCGGGCAGGGATACTGGATCATCCGCGATACGGCC
TACCTGCAGCAGCAGACCGTCAACGCCCAGGCGCTCTCGACCTATATCCAGCGGCTCGACAATGCGGCGCTCACGGCGCT
GGCCGGGCTCGACCCCGCGGCGGACAAGTTCGCCTACTTCACCGGTGCAAACTCGGGCGCGCTGGCGGACATCAAGGCAA
AGGGGCGAGACCTGCTTTCGTCGACGGGTGTGCTCGACGCACTCCTGAAGCTCGGGCCGGTATGGGGTGGATCCGTTCGA
TCCCCTGCTAACAGTGATGTCGGATTGGTCGATGGCGACCTCAACACGATCACCGTTGCCGGCGTTTACACACTCTCGGG
GAACTGGGCCAACACCTATGCCGGAGCTGCCTCGGTAGCCACGACAGGCACGCTCGTGGTTCTCCAGCGAAGCGCCAATG
CCGTGTTTCAATATTTCTACCGAGACAACAACCAGGTCTTCAGAAGGAACACCGTCAACGGCGGCACAAGCTGGACGGAC
TGGACGATTGTTGAGCTACCGGTTGTAGGCACTGCCTCAAACTCGGCAGGCTTCCCGGCTGGCGCAATCATTGAGCGCGG
CAGCAACGCCAACGGCGAGTACGTGCGTTTTGCTGACGGCACACAGATCTGTTGGGGGACGGGAACGACTAACGTTTCGA
CCAACCTCAACAACCACTTCGGATCTACCTCTGGAGCCTCGGTCACCGGCAACGCTTTGATCAGCTTCCCGGCGACGTTC
TCGAACACAAACTACTCGGTATCGGTCTTCCCGACCTTCCGCGGCTTCACGGTGCTTGGCGCCTATTCAAAGAACGGTGC
CAATGCCGCTGTCAGGATGGGCGTGTCAGGCTCGACCGCAAACGATGTTCCTTATGAATGGTCAGCTTACGGAAGGTGGT
TCTGA

Upstream 100 bases:

>100_bases
ACGATGCAGACGATCCCGGCACGTGGCGCACGGAAGGCGCCGATCACGTGCTCGGCATCCGCTACTACATTCTCGGCATC
CCAGCTTAGGAACTCCTGAC

Downstream 100 bases:

>100_bases
TGAAAATTGATCTCTCTCCCCAGCGCCGCGATGACCTCCTGGAGGTCACAAAGGCTGGTGACGCCCTCACGATCAACGGT
ATGGCATTCGACTTCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTIPYVTGTVSVTAGSAVVTGSGTAWATALIAGGFFGLDSSNGNPVPILSVDSNTQLTLAKPWRGTTAAGQGYWIIRDTA
YLQQQTVNAQALSTYIQRLDNAALTALAGLDPAADKFAYFTGANSGALADIKAKGRDLLSSTGVLDALLKLGPVWGGSVR
SPANSDVGLVDGDLNTITVAGVYTLSGNWANTYAGAASVATTGTLVVLQRSANAVFQYFYRDNNQVFRRNTVNGGTSWTD
WTIVELPVVGTASNSAGFPAGAIIERGSNANGEYVRFADGTQICWGTGTTNVSTNLNNHFGSTSGASVTGNALISFPATF
SNTNYSVSVFPTFRGFTVLGAYSKNGANAAVRMGVSGSTANDVPYEWSAYGRWF

Sequences:

>Translated_374_residues
MTIPYVTGTVSVTAGSAVVTGSGTAWATALIAGGFFGLDSSNGNPVPILSVDSNTQLTLAKPWRGTTAAGQGYWIIRDTA
YLQQQTVNAQALSTYIQRLDNAALTALAGLDPAADKFAYFTGANSGALADIKAKGRDLLSSTGVLDALLKLGPVWGGSVR
SPANSDVGLVDGDLNTITVAGVYTLSGNWANTYAGAASVATTGTLVVLQRSANAVFQYFYRDNNQVFRRNTVNGGTSWTD
WTIVELPVVGTASNSAGFPAGAIIERGSNANGEYVRFADGTQICWGTGTTNVSTNLNNHFGSTSGASVTGNALISFPATF
SNTNYSVSVFPTFRGFTVLGAYSKNGANAAVRMGVSGSTANDVPYEWSAYGRWF
>Mature_373_residues
TIPYVTGTVSVTAGSAVVTGSGTAWATALIAGGFFGLDSSNGNPVPILSVDSNTQLTLAKPWRGTTAAGQGYWIIRDTAY
LQQQTVNAQALSTYIQRLDNAALTALAGLDPAADKFAYFTGANSGALADIKAKGRDLLSSTGVLDALLKLGPVWGGSVRS
PANSDVGLVDGDLNTITVAGVYTLSGNWANTYAGAASVATTGTLVVLQRSANAVFQYFYRDNNQVFRRNTVNGGTSWTDW
TIVELPVVGTASNSAGFPAGAIIERGSNANGEYVRFADGTQICWGTGTTNVSTNLNNHFGSTSGASVTGNALISFPATFS
NTNYSVSVFPTFRGFTVLGAYSKNGANAAVRMGVSGSTANDVPYEWSAYGRWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38844; Mature: 38713

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPYVTGTVSVTAGSAVVTGSGTAWATALIAGGFFGLDSSNGNPVPILSVDSNTQLTLA
CCCCEEEEEEEEECCCEEEECCCHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCEEEEE
KPWRGTTAAGQGYWIIRDTAYLQQQTVNAQALSTYIQRLDNAALTALAGLDPAADKFAYF
CCCCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHEEHHHCCCCCCCCEEEE
TGANSGALADIKAKGRDLLSSTGVLDALLKLGPVWGGSVRSPANSDVGLVDGDLNTITVA
ECCCCCEEEEEHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEE
GVYTLSGNWANTYAGAASVATTGTLVVLQRSANAVFQYFYRDNNQVFRRNTVNGGTSWTD
EEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCC
WTIVELPVVGTASNSAGFPAGAIIERGSNANGEYVRFADGTQICWGTGTTNVSTNLNNHF
EEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEECCCCEEECCCCCCC
GSTSGASVTGNALISFPATFSNTNYSVSVFPTFRGFTVLGAYSKNGANAAVRMGVSGSTA
CCCCCCEEECCEEEEECCEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCC
NDVPYEWSAYGRWF
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TIPYVTGTVSVTAGSAVVTGSGTAWATALIAGGFFGLDSSNGNPVPILSVDSNTQLTLA
CCCEEEEEEEEECCCEEEECCCHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCEEEEE
KPWRGTTAAGQGYWIIRDTAYLQQQTVNAQALSTYIQRLDNAALTALAGLDPAADKFAYF
CCCCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHEEHHHCCCCCCCCEEEE
TGANSGALADIKAKGRDLLSSTGVLDALLKLGPVWGGSVRSPANSDVGLVDGDLNTITVA
ECCCCCEEEEEHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEE
GVYTLSGNWANTYAGAASVATTGTLVVLQRSANAVFQYFYRDNNQVFRRNTVNGGTSWTD
EEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCC
WTIVELPVVGTASNSAGFPAGAIIERGSNANGEYVRFADGTQICWGTGTTNVSTNLNNHF
EEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEECCCCEEECCCCCCC
GSTSGASVTGNALISFPATFSNTNYSVSVFPTFRGFTVLGAYSKNGANAAVRMGVSGSTA
CCCCCCEEECCEEEEECCEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCC
NDVPYEWSAYGRWF
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA