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The map label for this gene is 150396815

Identifier: 150396815

GI number: 150396815

Start: 1701289

End: 1701990

Strand: Direct

Name: 150396815

Synonym: Smed_1606

Alternate gene names: NA

Gene position: 1701289-1701990 (Clockwise)

Preceding gene: 150396814

Following gene: 150396823

Centisome position: 44.98

GC content: 62.39

Gene sequence:

>702_bases
ATGAACCGGCTGATTCTCCTCCTGGCAATTCTCGGCATCGGCCTCGTGCTCCTGATCCTCAATCACGATTCCGGCCGGAC
GTTCGGCATGAACAATGACGATTTCGGGCAGCTCGTGGCTCTCGGCGCCCTTGCCACGCTTTTTGCGGCCGGCATTGTCA
GAAGCCGCCGCACGCTCGGCGAGGGATTGACCCAGATTGCGATCTGGATCCTGATCGCGGTGGTTCTGGTTGGGATTTAC
GTCTACCGGTTTGACCTTCGGTCCGTTGGCGAACGGGTGCTGGCCGGCCTTATGCCTGGCCGCGCGATGGTCATCACCGA
CAGCGAGGGCCAGCAGGAGGTGGTGCTTCACAAGCGGATCGACGGCCACTTCGCCGCAGATGCGACGATCAACGGGCACG
ACGTCAGCATGCTTGTAGACACCGGCGCGAGCAGCATCGTGCTTACCCATGAAGACGCTGCGAAGGTCGGTATCGACGTC
GCAGGTCTCGGCTACACGATAACTGTCATGACCGCGAACGGACCGGCGCTCGCCGCCCCGGTCACCCTGCCGGAGATCGC
CATAGGGCCGATCCGGCGGACGAATATTCGCGGCATGGTCGCGGCCGAAGGGCGGCTTGACAGCAGCCTGCTCGGCATGA
GTTTTCTGTCGACGCTCGATTTCCTGCAGATGCGCAGCGACGAACTGCCGCTCAGGGATTAG

Upstream 100 bases:

>100_bases
ACGGCATCATGCAGGCCCTGCCGGCGCGACTGGAAACCGTCGAGCGTAAACCGCGGCGGGAAACGCGTCGGACTCGTATC
GCGCGGGAACGAAACGGCGC

Downstream 100 bases:

>100_bases
CGCGTAGTCAACTGCGCAGCTTGTATCCGGTGCGAAAAATCCACGTCAGAGCGGACATACACAGAGCGAGAAAGACGAGG
ATGATCGCCGCGCTGGCGAG

Product: putative transmembrane signal peptide protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNRLILLLAILGIGLVLLILNHDSGRTFGMNNDDFGQLVALGALATLFAAGIVRSRRTLGEGLTQIAIWILIAVVLVGIY
VYRFDLRSVGERVLAGLMPGRAMVITDSEGQQEVVLHKRIDGHFAADATINGHDVSMLVDTGASSIVLTHEDAAKVGIDV
AGLGYTITVMTANGPALAAPVTLPEIAIGPIRRTNIRGMVAAEGRLDSSLLGMSFLSTLDFLQMRSDELPLRD

Sequences:

>Translated_233_residues
MNRLILLLAILGIGLVLLILNHDSGRTFGMNNDDFGQLVALGALATLFAAGIVRSRRTLGEGLTQIAIWILIAVVLVGIY
VYRFDLRSVGERVLAGLMPGRAMVITDSEGQQEVVLHKRIDGHFAADATINGHDVSMLVDTGASSIVLTHEDAAKVGIDV
AGLGYTITVMTANGPALAAPVTLPEIAIGPIRRTNIRGMVAAEGRLDSSLLGMSFLSTLDFLQMRSDELPLRD
>Mature_233_residues
MNRLILLLAILGIGLVLLILNHDSGRTFGMNNDDFGQLVALGALATLFAAGIVRSRRTLGEGLTQIAIWILIAVVLVGIY
VYRFDLRSVGERVLAGLMPGRAMVITDSEGQQEVVLHKRIDGHFAADATINGHDVSMLVDTGASSIVLTHEDAAKVGIDV
AGLGYTITVMTANGPALAAPVTLPEIAIGPIRRTNIRGMVAAEGRLDSSLLGMSFLSTLDFLQMRSDELPLRD

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24813; Mature: 24813

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLILLLAILGIGLVLLILNHDSGRTFGMNNDDFGQLVALGALATLFAAGIVRSRRTLG
CCHHHHHHHHHHHHHEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLTQIAIWILIAVVLVGIYVYRFDLRSVGERVLAGLMPGRAMVITDSEGQQEVVLHKRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHEEECC
DGHFAADATINGHDVSMLVDTGASSIVLTHEDAAKVGIDVAGLGYTITVMTANGPALAAP
CCCEEECCEECCCEEEEEEECCCCEEEEEECCHHHHCEEEECCCEEEEEEEECCCEEECC
VTLPEIAIGPIRRTNIRGMVAAEGRLDSSLLGMSFLSTLDFLQMRSDELPLRD
CCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNRLILLLAILGIGLVLLILNHDSGRTFGMNNDDFGQLVALGALATLFAAGIVRSRRTLG
CCHHHHHHHHHHHHHEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLTQIAIWILIAVVLVGIYVYRFDLRSVGERVLAGLMPGRAMVITDSEGQQEVVLHKRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHEEECC
DGHFAADATINGHDVSMLVDTGASSIVLTHEDAAKVGIDVAGLGYTITVMTANGPALAAP
CCCEEECCEECCCEEEEEEECCCCEEEEEECCHHHHCEEEECCCEEEEEEEECCCEEECC
VTLPEIAIGPIRRTNIRGMVAAEGRLDSSLLGMSFLSTLDFLQMRSDELPLRD
CCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]