| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is sam [H]
Identifier: 150396792
GI number: 150396792
Start: 1680111
End: 1681019
Strand: Direct
Name: sam [H]
Synonym: Smed_1583
Alternate gene names: 150396792
Gene position: 1680111-1681019 (Clockwise)
Preceding gene: 150396791
Following gene: 150396793
Centisome position: 44.43
GC content: 63.48
Gene sequence:
>909_bases ATGGGCTCGTCAGCCAACTTCCGCGGCATCGTCTTCATGTGCCTCGCGATGATCGGGTTCGCCTGCAACGACGCGCTGGT AAAATCGGTCACCGGCGCCATGAACACCGGTCAGATAATGTTCATGCGCGGCTTGCTGACGACGCTGATGGTTGTCGTCA TTGCATACCGTCTCGGTGCATTTCGGCCGATACGGACCATCCTCCGGCCAGCTATCCTGCTGCGCATCGCAATGGAGGCG CTGGCATCGGTGACCTATATCTCCGCACTCGGCCAGATTCCGCTCGCCAACGCATCGGCGATCATGCAGGCGCTACCGCT GGCGGTGACGCTCGGTGCCGCGCTGTTTCTCGGCGAGCCCGTCGGCTGGCGTCGGTGGGCGGCGATCGTGGTCGGCTTCG CCGGCGTCCTCATCGTGTTGCGTCCTGGTCCTGAGGGTTTCACCGTGGCGGCCCTTACAGTCGTTGCCTGCGTCTTTTGC ACCGCGACGCGCGATCTCTGCACGCGCCGTATCGGCACCGACGTGCCTTCGCTGTACATCACCGTGACGACCTCATTCGT AACGACGCTGGTAGGCGCGGCCCTCATCGTGCCGCTCGGCGGCTGGCAACCAATGTCGGCGACGTCGCTCAGCCATATCG CCGGGGCCAGCGTGCTTCTGATGCTCGGCTATCAGACGATCGTGCTCGCGATGCGCGAAGGCGAGATTTCGGTGATTGCC CCATTTCGCTATATGAGCCTTCTGTGGTCCGTCACGCTCGGGGTCGTCTTCTTCGCAGAGACACCGGACCGCTGGATGCT GGCGGGCGTCGCCATCATCATCGGCTCGGGCCTTTATACTTTCTACCGCGAGAGCAAGCGCGGCCGGCGAGCGGTCGCTC AGCGTGCACTCACCGGCCCTCTGGAATAG
Upstream 100 bases:
>100_bases TGTTTCTCGTTAAATCAGATAGGATTCAACGACCATGCAATAGAGATTCGCCAACGCCGGGAGGCCCTGCCGCTCGGCCA GAACATCACCAGGAAAAAGA
Downstream 100 bases:
>100_bases TGGAGGACGCTAGATGACAGGCGGCCCTTCTCATGCCTCCTCCCGGCCGCCAGCAGTCATCCTCGCCGGCGGACGGTCTT CGCGCATGGGGCATCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGSSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVIAYRLGAFRPIRTILRPAILLRIAMEA LASVTYISALGQIPLANASAIMQALPLAVTLGAALFLGEPVGWRRWAAIVVGFAGVLIVLRPGPEGFTVAALTVVACVFC TATRDLCTRRIGTDVPSLYITVTTSFVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEISVIA PFRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRRAVAQRALTGPLE
Sequences:
>Translated_302_residues MGSSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVIAYRLGAFRPIRTILRPAILLRIAMEA LASVTYISALGQIPLANASAIMQALPLAVTLGAALFLGEPVGWRRWAAIVVGFAGVLIVLRPGPEGFTVAALTVVACVFC TATRDLCTRRIGTDVPSLYITVTTSFVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEISVIA PFRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRRAVAQRALTGPLE >Mature_301_residues GSSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVIAYRLGAFRPIRTILRPAILLRIAMEAL ASVTYISALGQIPLANASAIMQALPLAVTLGAALFLGEPVGWRRWAAIVVGFAGVLIVLRPGPEGFTVAALTVVACVFCT ATRDLCTRRIGTDVPSLYITVTTSFVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEISVIAP FRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRRAVAQRALTGPLE
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32199; Mature: 32068
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVIAYRLGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC FRPIRTILRPAILLRIAMEALASVTYISALGQIPLANASAIMQALPLAVTLGAALFLGEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC VGWRRWAAIVVGFAGVLIVLRPGPEGFTVAALTVVACVFCTATRDLCTRRIGTDVPSLYI CCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TVTTSFVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEISVIA EEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEE PFRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRRAVAQRALTGP HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC LE CC >Mature Secondary Structure GSSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVIAYRLGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC FRPIRTILRPAILLRIAMEALASVTYISALGQIPLANASAIMQALPLAVTLGAALFLGEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC VGWRRWAAIVVGFAGVLIVLRPGPEGFTVAALTVVACVFCTATRDLCTRRIGTDVPSLYI CCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TVTTSFVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEISVIA EEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEE PFRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRRAVAQRALTGP HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC LE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA