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The map label for this gene is 150396788

Identifier: 150396788

GI number: 150396788

Start: 1677725

End: 1678246

Strand: Direct

Name: 150396788

Synonym: Smed_1579

Alternate gene names: NA

Gene position: 1677725-1678246 (Clockwise)

Preceding gene: 150396785

Following gene: 150396791

Centisome position: 44.36

GC content: 59.39

Gene sequence:

>522_bases
ATGTTCAACACTGAACATATTTGTACAACGATGAACAAAATGCAAGTGCCCATCGAAAACCACCACTTCCCCTGGGATCA
TCCGCGTTTTCGCAGTTGGATCGCCGTCGCCCGCGCCTGCCAGCTGATGCAGCAGTCGTTGTCGCGGCGGCTGACGCATC
TCGACATCAAGCCGCCTCACCTCGATATTCTGGTCAATCTCTATCGGTTCGACGGCATCACGCAGCAGGAACTTGCGCGC
AAGCTGCTTGTCGGCCGCTCCAATATGAGCATGCTGCTGCCGCAGCTCGAAAAGCGTGGCCTCATCGAGCGACGGGGTGA
TGCCAGGGACAAGCGCGTGCTGCGTCTGTCGCTCACGCCCACGGGAAGGACCTTGACGGAGGAGGCGATGGAGATTCAAA
CGGCGCTCATCGAAAGTTCGCACGGCGGCACGCCGATCGAGGACTGCGTCAAGGTCGCAGAGGCGATGGAGCAAATCATC
GCCACCCTGCTCAAAGAGGACGACTTGCCGGCCGGAGGCTGA

Upstream 100 bases:

>100_bases
AATGCGGCCTCGCCCGCCTTTTCAGCCGAGACCGCGGCGACGGCCTTTAACGATAGACGGATGACCTTGATCGCAAAGGA
TGCCATAGTGGGGCCCTCTA

Downstream 100 bases:

>100_bases
ACTGGGGCTCCGGACCAGCCGTTCAGCCGGCGTGTGGAAGCGTCAGCGCGGCTTCTCGGCCTTGTCGCGCGACATGCCCT
TCTCAGCGAGCTCCTGCTCA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator Marr Family; Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MFNTEHICTTMNKMQVPIENHHFPWDHPRFRSWIAVARACQLMQQSLSRRLTHLDIKPPHLDILVNLYRFDGITQQELAR
KLLVGRSNMSMLLPQLEKRGLIERRGDARDKRVLRLSLTPTGRTLTEEAMEIQTALIESSHGGTPIEDCVKVAEAMEQII
ATLLKEDDLPAGG

Sequences:

>Translated_173_residues
MFNTEHICTTMNKMQVPIENHHFPWDHPRFRSWIAVARACQLMQQSLSRRLTHLDIKPPHLDILVNLYRFDGITQQELAR
KLLVGRSNMSMLLPQLEKRGLIERRGDARDKRVLRLSLTPTGRTLTEEAMEIQTALIESSHGGTPIEDCVKVAEAMEQII
ATLLKEDDLPAGG
>Mature_173_residues
MFNTEHICTTMNKMQVPIENHHFPWDHPRFRSWIAVARACQLMQQSLSRRLTHLDIKPPHLDILVNLYRFDGITQQELAR
KLLVGRSNMSMLLPQLEKRGLIERRGDARDKRVLRLSLTPTGRTLTEEAMEIQTALIESSHGGTPIEDCVKVAEAMEQII
ATLLKEDDLPAGG

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19760; Mature: 19760

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNTEHICTTMNKMQVPIENHHFPWDHPRFRSWIAVARACQLMQQSLSRRLTHLDIKPPH
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LDILVNLYRFDGITQQELARKLLVGRSNMSMLLPQLEKRGLIERRGDARDKRVLRLSLTP
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECC
TGRTLTEEAMEIQTALIESSHGGTPIEDCVKVAEAMEQIIATLLKEDDLPAGG
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFNTEHICTTMNKMQVPIENHHFPWDHPRFRSWIAVARACQLMQQSLSRRLTHLDIKPPH
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LDILVNLYRFDGITQQELARKLLVGRSNMSMLLPQLEKRGLIERRGDARDKRVLRLSLTP
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECC
TGRTLTEEAMEIQTALIESSHGGTPIEDCVKVAEAMEQIIATLLKEDDLPAGG
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA