Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150396645

Identifier: 150396645

GI number: 150396645

Start: 1513078

End: 1513485

Strand: Direct

Name: 150396645

Synonym: Smed_1431

Alternate gene names: NA

Gene position: 1513078-1513485 (Clockwise)

Preceding gene: 150396644

Following gene: 150396646

Centisome position: 40.01

GC content: 62.5

Gene sequence:

>408_bases
ATGAACGCCAAGATCTTCATTGTTACTGCGATCGCAACGGGCATCGTTGCCGCGCCCGCTATTGCAAATGACAGCAATCA
AGGTGCCGTAACGGGCGCTGCGGGCGGAGCGGTTACTGGTGCAATCGTTGGAGGCCCCGTTGGAGCCGCCATCGGTGGAG
CGGTCGGGCTCGTCGCCGGAGCGGTTATCGCCCCTCCGCCGCAGCAGGTCGTAACTTATGTCCGGCAGCAGCCGGTTCCA
GCCGATACGGTCGTCTTGCAGGAACGGATCGCCGTCGGGCGCCCGCTACCGCGCAGCGTTATGCTGACGCCCGTCCCGGA
GAACCCCTCCTATGCCTTCGCCGTGGTGAACAACCAACGCGTGATCGTCGACCCTAAAACCTACACGGTCGTCCAGGTCG
TTCAATAA

Upstream 100 bases:

>100_bases
AACTTATTTTTATTGATGAAATACTGATAGCGCGAAATAAAATCAGGAACAATGTTTAAGGATGTTCGTTCTTCCACTGT
ATAGCAAGGGAGTACGACAG

Downstream 100 bases:

>100_bases
GAAACACCGCGACTGCCGGCGGCGCCCGAATGTTGGCGCCGCCGGCGCTCTTGCCATTGCGACCGGACCACCGGCAGCGT
CGGGCTGTGTGGCTGATACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNAKIFIVTAIATGIVAAPAIANDSNQGAVTGAAGGAVTGAIVGGPVGAAIGGAVGLVAGAVIAPPPQQVVTYVRQQPVP
ADTVVLQERIAVGRPLPRSVMLTPVPENPSYAFAVVNNQRVIVDPKTYTVVQVVQ

Sequences:

>Translated_135_residues
MNAKIFIVTAIATGIVAAPAIANDSNQGAVTGAAGGAVTGAIVGGPVGAAIGGAVGLVAGAVIAPPPQQVVTYVRQQPVP
ADTVVLQERIAVGRPLPRSVMLTPVPENPSYAFAVVNNQRVIVDPKTYTVVQVVQ
>Mature_135_residues
MNAKIFIVTAIATGIVAAPAIANDSNQGAVTGAAGGAVTGAIVGGPVGAAIGGAVGLVAGAVIAPPPQQVVTYVRQQPVP
ADTVVLQERIAVGRPLPRSVMLTPVPENPSYAFAVVNNQRVIVDPKTYTVVQVVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13501; Mature: 13501

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKIFIVTAIATGIVAAPAIANDSNQGAVTGAAGGAVTGAIVGGPVGAAIGGAVGLVAG
CCCEEEEEEEEHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHC
AVIAPPPQQVVTYVRQQPVPADTVVLQERIAVGRPLPRSVMLTPVPENPSYAFAVVNNQR
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCE
VIVDPKTYTVVQVVQ
EEECCCCEEEEEEEC
>Mature Secondary Structure
MNAKIFIVTAIATGIVAAPAIANDSNQGAVTGAAGGAVTGAIVGGPVGAAIGGAVGLVAG
CCCEEEEEEEEHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHC
AVIAPPPQQVVTYVRQQPVPADTVVLQERIAVGRPLPRSVMLTPVPENPSYAFAVVNNQR
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCE
VIVDPKTYTVVQVVQ
EEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA