Click here to switch to the map view.

The map label for this gene is 150396535

Identifier: 150396535

GI number: 150396535

Start: 1409663

End: 1410268

Strand: Direct

Name: 150396535

Synonym: Smed_1317

Alternate gene names: NA

Gene position: 1409663-1410268 (Clockwise)

Preceding gene: 150396527

Following gene: 150396540

Centisome position: 37.27

GC content: 57.1

Gene sequence:

>606_bases
ATGGAGGCCATATTGGCTGCGAGACTTGCATGCTCTGTTCAGGATTGCGTTGAGCCCTGCGTTGCGCGAGGCTACTGCAA
CACCCACTACCGAAAGTTCATGTACCACGGCGACCCGCTTGCGGGCCGGACGAAGAAGCCAGCGAAGAAAGGCGAACCGC
TTCGGTGGCTGCTCGACCACGTCGCACACGCCGACAAAGACGAATGCCTGACGTGGCCATTCTCACGTTTCCAAAATGGT
TACGGCCTGATCGTGAAGGACGGGGCAAGCTACGGCGCTCATCGATACATGTGCGAACTAGTCAGCGGAGAGCCGCCGAC
CCCGGAGCACGTAGCCGCTCATTCCTGTAACAAGGGCAGAGACGGATGCGTTAATCCCCATCACCTTCGATGGGCGACCA
GCCAGGAGAACACTCTTGACCGATTTGATCACGGAACAATGCCGACTGGCTCAGCATCGCATTTCGCGAAGCTGACGCCG
GAGCAAGTCAGTGAAATTCGCAAAATAGGCCGATCAAGGACACAGCGCGATCTCGCCAAGATTTATGGCGTTTGCAAAAG
CACCATTGGCTACATCGTCCGCGGCGAGAACTGGGCTACCAGTTAG

Upstream 100 bases:

>100_bases
GAGGAATAGATCTAGTTGGTCATTCGTCGTGTTTACACTATATATAGTGGTCACTCCGGATGGATGGCCATCACGAACTC
TTCAATCCAGTTCCAGATTT

Downstream 100 bases:

>100_bases
GCCATTTTATAGTGGCATCACGCATCAGCGGCACACGCTTGCAGAACTCGTCATCGGCCGCGGATGGATTGAGCACGGCA
GACCGAGCTCGCTGGCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MEAILAARLACSVQDCVEPCVARGYCNTHYRKFMYHGDPLAGRTKKPAKKGEPLRWLLDHVAHADKDECLTWPFSRFQNG
YGLIVKDGASYGAHRYMCELVSGEPPTPEHVAAHSCNKGRDGCVNPHHLRWATSQENTLDRFDHGTMPTGSASHFAKLTP
EQVSEIRKIGRSRTQRDLAKIYGVCKSTIGYIVRGENWATS

Sequences:

>Translated_201_residues
MEAILAARLACSVQDCVEPCVARGYCNTHYRKFMYHGDPLAGRTKKPAKKGEPLRWLLDHVAHADKDECLTWPFSRFQNG
YGLIVKDGASYGAHRYMCELVSGEPPTPEHVAAHSCNKGRDGCVNPHHLRWATSQENTLDRFDHGTMPTGSASHFAKLTP
EQVSEIRKIGRSRTQRDLAKIYGVCKSTIGYIVRGENWATS
>Mature_201_residues
MEAILAARLACSVQDCVEPCVARGYCNTHYRKFMYHGDPLAGRTKKPAKKGEPLRWLLDHVAHADKDECLTWPFSRFQNG
YGLIVKDGASYGAHRYMCELVSGEPPTPEHVAAHSCNKGRDGCVNPHHLRWATSQENTLDRFDHGTMPTGSASHFAKLTP
EQVSEIRKIGRSRTQRDLAKIYGVCKSTIGYIVRGENWATS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22473; Mature: 22473

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAILAARLACSVQDCVEPCVARGYCNTHYRKFMYHGDPLAGRTKKPAKKGEPLRWLLDH
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
VAHADKDECLTWPFSRFQNGYGLIVKDGASYGAHRYMCELVSGEPPTPEHVAAHSCNKGR
HHCCCCCHHEECCHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCC
DGCVNPHHLRWATSQENTLDRFDHGTMPTGSASHFAKLTPEQVSEIRKIGRSRTQRDLAK
CCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IYGVCKSTIGYIVRGENWATS
HHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MEAILAARLACSVQDCVEPCVARGYCNTHYRKFMYHGDPLAGRTKKPAKKGEPLRWLLDH
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
VAHADKDECLTWPFSRFQNGYGLIVKDGASYGAHRYMCELVSGEPPTPEHVAAHSCNKGR
HHCCCCCHHEECCHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCC
DGCVNPHHLRWATSQENTLDRFDHGTMPTGSASHFAKLTPEQVSEIRKIGRSRTQRDLAK
CCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IYGVCKSTIGYIVRGENWATS
HHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA