| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396522
Identifier: 150396522
GI number: 150396522
Start: 1397300
End: 1397743
Strand: Direct
Name: 150396522
Synonym: Smed_1304
Alternate gene names: NA
Gene position: 1397300-1397743 (Clockwise)
Preceding gene: 150396521
Following gene: 150396524
Centisome position: 36.95
GC content: 47.52
Gene sequence:
>444_bases ATGAAGCAGAGGAGAACATTTCTCTCAGAGATCTTTTCTGGAGAGTCATCGGCAACATTTGATGCGGCAAAGAGACTGTC TGACTACGTTGGGATGCTGGTAAGGCTCATCTTCTTGTTCGGCGTAACGGTTTACTTAGGCAAAAAGGTTACTGCAAAGA GCATTGCTCTTTGGGGAGTAATTGATTTTACACTTATAATTATTGCCGTTTCAGTTGGTGTACTATCAACAGTTCTAGCC ATTGCCTTCGTCGCGACAACGAGGGCAGCGCTTGATGAACTGTTTTCGGTCGGCGACTATCCTGCCTCGTCGCACTGGTA CAGGCGCGGCCTCTCAATCACCCTCTTCATCGTTAGCTCATTGCTCACGTCCGCTGTCTTTATATCCGTTGTCTATCAAT TACCGTTGATTGTTCGTGATCTTGCGCAAGCGGCCCAACCATAG
Upstream 100 bases:
>100_bases GATAGGCTGAGCCGAGAGACCCCAACGCATAACGCTTCCTGACGAAAGCTGCGACATACCGTGAGTAATTAACAAATGTG AATTAAAGGACGGCAGCAAG
Downstream 100 bases:
>100_bases CGCACTCTTCACAGACTATACACCCCCGCCTCATCCTCCCGCTCCCTGATCCCCTTGAACGAGGCATGCCTTAGCTTTCC GTCGTCTGTCCAGGCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKQRRTFLSEIFSGESSATFDAAKRLSDYVGMLVRLIFLFGVTVYLGKKVTAKSIALWGVIDFTLIIIAVSVGVLSTVLA IAFVATTRAALDELFSVGDYPASSHWYRRGLSITLFIVSSLLTSAVFISVVYQLPLIVRDLAQAAQP
Sequences:
>Translated_147_residues MKQRRTFLSEIFSGESSATFDAAKRLSDYVGMLVRLIFLFGVTVYLGKKVTAKSIALWGVIDFTLIIIAVSVGVLSTVLA IAFVATTRAALDELFSVGDYPASSHWYRRGLSITLFIVSSLLTSAVFISVVYQLPLIVRDLAQAAQP >Mature_147_residues MKQRRTFLSEIFSGESSATFDAAKRLSDYVGMLVRLIFLFGVTVYLGKKVTAKSIALWGVIDFTLIIIAVSVGVLSTVLA IAFVATTRAALDELFSVGDYPASSHWYRRGLSITLFIVSSLLTSAVFISVVYQLPLIVRDLAQAAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16041; Mature: 16041
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRRTFLSEIFSGESSATFDAAKRLSDYVGMLVRLIFLFGVTVYLGKKVTAKSIALWGV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IDFTLIIIAVSVGVLSTVLAIAFVATTRAALDELFSVGDYPASSHWYRRGLSITLFIVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHH LLTSAVFISVVYQLPLIVRDLAQAAQP HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQRRTFLSEIFSGESSATFDAAKRLSDYVGMLVRLIFLFGVTVYLGKKVTAKSIALWGV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IDFTLIIIAVSVGVLSTVLAIAFVATTRAALDELFSVGDYPASSHWYRRGLSITLFIVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHH LLTSAVFISVVYQLPLIVRDLAQAAQP HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA