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The map label for this gene is 150396442

Identifier: 150396442

GI number: 150396442

Start: 1307335

End: 1308207

Strand: Direct

Name: 150396442

Synonym: Smed_1224

Alternate gene names: NA

Gene position: 1307335-1308207 (Clockwise)

Preceding gene: 150396441

Following gene: 150396443

Centisome position: 34.57

GC content: 61.4

Gene sequence:

>873_bases
GTGAAATCCCTCCGGCCTACTCACCCGCCGCTTCCGCGGCTCGATCCGGGGCGCAAGCGCACCAAGCTCTGCCAGTTATG
GGCACAGGCCATCGATGATCGCCCATGGAATGGTCCGGCGCCACCGGCGGTCGCCTATATCTTTGCCGACAGCCGCAGCG
CCCGTGAGGTCGAGGGGCAACTATCGTCGTTTGGCGGCGTGCTTCAAGTCGATGGCTACCAAGCCTATAAGACCATGGCC
AAGCGCCGGGGGAAGAGCAATGTCGCCCCCATGCGGCTGGCGTTCTGCCTTGCCCATGCGCGGCGCAAGTTCGTCGATGT
CGTCAAACTGACCGGCTCCTCGGAGGCGCTGTCGATCCTTGCCAGGATTGCCGAGATCTATCGCATCGAAGCGAAGATCC
GAGGCGAAAGTGCCGATACCCGGCTGAGGGTGCGGCGTCGCGAGGCAGCGCCCATCATGAGCGAACTGAAGGCCCAGCTC
ACCGAACTGAGCGACGAGGTGTCGGCAAAATCGGCGCTTGGCAAGGCCGTCACCTACACGCTCAACCACTGGAACGGACT
GGCAGCCTTCCTAGAGGATGGCCGGATCGAAGTAGACTCCAATGTGGTCGAGCGTTCGATGAAATCGGTGGCCCTGACGA
GGAAGAATTCCTTGTTCGTGGGCAGTGCGCGCGGCGGAGAGACTTTCGCTGTGCTCGCATCACTGATCAACACGGCAAAG
CTTAACGGCGTGGATCCTGAAGTCTGGCTTGCCGATGTGCTGGAACGCATCATCTCCGGCAAAGTGAAAGCCAACCGGAT
GGAAAGCCTATTGCCGTGGGCTTGGAAGGCCGAACGCGAGGACATTGCAGATCAGGAGCGACGGGCGGCATGA

Upstream 100 bases:

>100_bases
GCCTCTTCGTACACTGGCAGGCGTTCGGAACGAACCTGTTTGCCTGATGGGAGCGGTGTGAATCGAGAGGTTCACGCACC
GTTCTACGAGAGGCCGGCAG

Downstream 100 bases:

>100_bases
CACAGAACAGCCAAGGGACGACGGTACGACCGAAGCTCGATGACGAGGCGTTCGAAGCCTTCATCAGGGCACGTCGTCCG
GCATCGCCAATCTGGTCAAT

Product: transposase IS66

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKSLRPTHPPLPRLDPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAYIFADSRSAREVEGQLSSFGGVLQVDGYQAYKTMA
KRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSILARIAEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQL
TELSDEVSAKSALGKAVTYTLNHWNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAK
LNGVDPEVWLADVLERIISGKVKANRMESLLPWAWKAEREDIADQERRAA

Sequences:

>Translated_290_residues
MKSLRPTHPPLPRLDPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAYIFADSRSAREVEGQLSSFGGVLQVDGYQAYKTMA
KRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSILARIAEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQL
TELSDEVSAKSALGKAVTYTLNHWNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAK
LNGVDPEVWLADVLERIISGKVKANRMESLLPWAWKAEREDIADQERRAA
>Mature_290_residues
MKSLRPTHPPLPRLDPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAYIFADSRSAREVEGQLSSFGGVLQVDGYQAYKTMA
KRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSILARIAEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQL
TELSDEVSAKSALGKAVTYTLNHWNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAK
LNGVDPEVWLADVLERIISGKVKANRMESLLPWAWKAEREDIADQERRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 32136; Mature: 32136

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLRPTHPPLPRLDPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAYIFADSRSAREVEGQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHH
LSSFGGVLQVDGYQAYKTMAKRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSIL
HHHCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ARIAEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQLTELSDEVSAKSALGKAVTYT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
LNHWNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAK
ECCCHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
LNGVDPEVWLADVLERIISGKVKANRMESLLPWAWKAEREDIADQERRAA
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKSLRPTHPPLPRLDPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAYIFADSRSAREVEGQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHH
LSSFGGVLQVDGYQAYKTMAKRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSIL
HHHCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ARIAEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQLTELSDEVSAKSALGKAVTYT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
LNHWNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAK
ECCCHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
LNGVDPEVWLADVLERIISGKVKANRMESLLPWAWKAEREDIADQERRAA
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]