| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is surE [H]
Identifier: 150396387
GI number: 150396387
Start: 1245158
End: 1245928
Strand: Direct
Name: surE [H]
Synonym: Smed_1168
Alternate gene names: 150396387
Gene position: 1245158-1245928 (Clockwise)
Preceding gene: 150396386
Following gene: 150396388
Centisome position: 32.92
GC content: 59.92
Gene sequence:
>771_bases ATGCGCATCCTGCTGACGAACGACGATGGCATTCACGCGGAAGGTCTTTCCGTGCTCGAACGGATCGCTCGAACGATAAC CGACGATGTTTGGGTCGTCGCGCCGGAAGTGGACCAGAGCGGGCTTGCCCATTCGCTGACGCTTTCGGAGCCCTTGCGCC TGCGCCCGGTTTCAGAACGGCGGTTTGCGCTCCGGGGCACACCGACGGATTGCGTGATCATGGCGGTGAAGAAGATCCTC GACCGAAAGCCCGATCTCGTTCTTTCCGGCGTCAATATCGGCGCCAACCTTGCAGACGACGTAACCTATTCCGGAACCGT GGCGGGCGCGATCGAAGGCACGTTGCAGGGGATTCGCTCGATGGCCCTCAGCCAGGCATATCACTACGCCGTCGGCCGGG AGGTTCCCTGGGATGTGGCGGAGACGCACGCGCCGGCTCTCATCCGCACATTGATGGATGTCGACCTGCCGGATGGAACG CTTGTCAATTTGAACTTCCCGAATTGCGCCGTCGATTCCGTTGCGGGAGTTGAGGTCACATCGCAAGGCAAGCTCGATTT CGGTCTCAGCATCGACGAGCGGACGGATGGACGCGGCTTTCCCTATTTCTGGCTGCGTTTCGGCGAGCGTGCCGGCGATT TCCGTTCCGGCACCGACATTCGGGCGTTGCGGGATAACAAGATATCGGTAACCCCGCTTAAACTAGATATGACCGATCAT GCCGTTCAGGATCTTATAGCGCGCGCATTGCGGAAAGGGACGGTCGCTTGA
Upstream 100 bases:
>100_bases GCAGGCCCAGCTTTGTGAAATCGAGACCTGCCGGAGCAGAGAACCCGTTAGACGGTTTTCCGGGAAGTGCTCCGGCACCA TAAATGGAAGAAGACCGGCA
Downstream 100 bases:
>100_bases ACGCACGGGTTTCCCAGCAGGAGGGGTTTGCAGCGATGGTGCTGCGGCTTCGCTCGGGCGGCATCGTCAACCATGAGCTT CTGAAGGCCGTGGAGCAGAC
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRILLTNDDGIHAEGLSVLERIARTITDDVWVVAPEVDQSGLAHSLTLSEPLRLRPVSERRFALRGTPTDCVIMAVKKIL DRKPDLVLSGVNIGANLADDVTYSGTVAGAIEGTLQGIRSMALSQAYHYAVGREVPWDVAETHAPALIRTLMDVDLPDGT LVNLNFPNCAVDSVAGVEVTSQGKLDFGLSIDERTDGRGFPYFWLRFGERAGDFRSGTDIRALRDNKISVTPLKLDMTDH AVQDLIARALRKGTVA
Sequences:
>Translated_256_residues MRILLTNDDGIHAEGLSVLERIARTITDDVWVVAPEVDQSGLAHSLTLSEPLRLRPVSERRFALRGTPTDCVIMAVKKIL DRKPDLVLSGVNIGANLADDVTYSGTVAGAIEGTLQGIRSMALSQAYHYAVGREVPWDVAETHAPALIRTLMDVDLPDGT LVNLNFPNCAVDSVAGVEVTSQGKLDFGLSIDERTDGRGFPYFWLRFGERAGDFRSGTDIRALRDNKISVTPLKLDMTDH AVQDLIARALRKGTVA >Mature_256_residues MRILLTNDDGIHAEGLSVLERIARTITDDVWVVAPEVDQSGLAHSLTLSEPLRLRPVSERRFALRGTPTDCVIMAVKKIL DRKPDLVLSGVNIGANLADDVTYSGTVAGAIEGTLQGIRSMALSQAYHYAVGREVPWDVAETHAPALIRTLMDVDLPDGT LVNLNFPNCAVDSVAGVEVTSQGKLDFGLSIDERTDGRGFPYFWLRFGERAGDFRSGTDIRALRDNKISVTPLKLDMTDH AVQDLIARALRKGTVA
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=248, Percent_Identity=37.9032258064516, Blast_Score=162, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27863; Mature: 27863
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLTNDDGIHAEGLSVLERIARTITDDVWVVAPEVDQSGLAHSLTLSEPLRLRPVSER CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCEECCCCCC RFALRGTPTDCVIMAVKKILDRKPDLVLSGVNIGANLADDVTYSGTVAGAIEGTLQGIRS CEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHHH MALSQAYHYAVGREVPWDVAETHAPALIRTLMDVDLPDGTLVNLNFPNCAVDSVAGVEVT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE SQGKLDFGLSIDERTDGRGFPYFWLRFGERAGDFRSGTDIRALRDNKISVTPLKLDMTDH CCCCEEECCEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCHHH AVQDLIARALRKGTVA HHHHHHHHHHHHCCCC >Mature Secondary Structure MRILLTNDDGIHAEGLSVLERIARTITDDVWVVAPEVDQSGLAHSLTLSEPLRLRPVSER CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCEECCCCCC RFALRGTPTDCVIMAVKKILDRKPDLVLSGVNIGANLADDVTYSGTVAGAIEGTLQGIRS CEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHHH MALSQAYHYAVGREVPWDVAETHAPALIRTLMDVDLPDGTLVNLNFPNCAVDSVAGVEVT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE SQGKLDFGLSIDERTDGRGFPYFWLRFGERAGDFRSGTDIRALRDNKISVTPLKLDMTDH CCCCEEECCEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCHHH AVQDLIARALRKGTVA HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9304864; 11481430 [H]