Click here to switch to the map view.

The map label for this gene is 150396364

Identifier: 150396364

GI number: 150396364

Start: 1214802

End: 1217201

Strand: Direct

Name: 150396364

Synonym: Smed_1145

Alternate gene names: NA

Gene position: 1214802-1217201 (Clockwise)

Preceding gene: 150396362

Following gene: 150396365

Centisome position: 32.12

GC content: 64.71

Gene sequence:

>2400_bases
ATGGCGGAGAGTCAGGTACGGATTGTCTTGCGCGACGACGAGCACAGCTCTCCGCCCCCCGCCGAAGGCACCGGGGTCGT
CGCCGGCAAATTGGCGATCGCCTCCGCCGGCCGAGCGCCTGCCGACCGGCGTTCTGCAACCATTCGCAACAGGACTCGTT
CCACCGCCGCCGCTGTCTCCCGCGGGATAAGTCGTGCGGCCGCCGAAGAGCAGGAATACGGCCACGGCTTCGTCCTGGTT
CCGGTCGTGCTCGCGCTCGGATCCCTGGCATGGTTTGCGCTGCCCGAAACCGTCGGAACCGCTAAACTTGCAGCGCTGCT
TTGCGTTTTCGGAATATCTGCGCTGCTTTGCCGAGGGAACCTCCGCCCCTGGCGGCCTCTGGCGGTCGCGCCGGCACTGT
TTGCTGCCGGCATGCTGCTCGCCGCGGCCGAAACGGCCAGGCGCGACACCGTCATTCTCGACGCGCCCGTGACAACGACT
GTTCGCGGGACGGTTTTGTCACGGGATCCGGACGACAGGGGACGCTGGCGCTATCTCGTGGAGATACAGGAAACATCGAA
CCCGCGGCTGCGCAGGGCACCGGAAAGGACAACGCTTCTGGCGCGGAGCCGCCACGAGCCTTTTGCCATCGGGGCGATCA
TCGAAGGCAAGGCCCGTTTGTCGCCGCCTTCGGGGCCTGCTCTGCCCGGTCTCAACGACTTCGCTTTCGGCGCCTATGTT
AAAGGCTTGGGCGCGGTGGGGTTTTTCTATGGTGCGCCGCGGGCGTTGGCGGGCGCCGCGTCAGGCAGAGACATAGCAGA
AACTTCGCTCGGGGAACGGGCGGCTGCATATCTGGCACCGGTCCGCGAGGCGATCGGCAACCGCATACGCTCGGCGATCG
GTGGCGACACGGGTGCGATCGCTGCCGCGCTCGTGACCGGCGAGGAGCGCGCGATCAGCCGAGAGGCGGTCGAGACATTG
CGTGCGGCCGGCCTCTCGCATGTCCTTGCGATCTCCGGGCTTAACATGGTGCTCGCCGCGGGTACCTTTCTGATTGGCGC
CCGGACGCTGCTGAGCCTCATTCCCGGCCTGGCCGAAAGGCACTCCGCCAAGAAGATTGCCGCCGTCGGCGCTCTTCTCA
TGGTCTTCTTCTATATCCTGATTTCCGGTGGCGCCGTCTCGGCAGTCAGATCCTGGATAATGATTTCGATCATGCTCGTC
GCAGTGCTGTTCGACCGCGTTTCGATCAGCCTGCGCAACGTCGCGCTCGCCGCATTGATCATTCTCGCCTGGACGCCGTC
GGCGGCAGCCGGACCCGGATTTCAAATGTCCTTTGCGGCGACGCTTGCCCTTGTGGCGGGCTATGCCCGCTGGCGCGACC
AGAGGAGAAAGCATCGAGAGAGCTCGGGCAGCCGGCCGGGCATGGGCGCCGTATCCAGCCTCGCTGTAGGCACCGTTGCC
ACTTCCCTCATTGGCGGAATGGCGACCGCTGTCTACGCGGCTGCCCATTTCAACCGGCTTCCCGCCTACGGGCTGGTCGC
AAATGTTCTCACGACCCCTCTGACCAGCGTACTCATTATGCCTTTCGCGCTGTTCGCGATGCTGCTCATGCCATTTGGGC
TCGAACATTATCCGCTCGTGATCATGGGGCAGGGGCTGGATTGGATGATGGCGGTCGCGCGATATGTCGCCGCGCTCGAT
GGCGAGTGGACGACCGGGCGCATGGCCGATGGGCCCTTCTTTCTCATCGCCCTCGGCGGCACGCTGCTTTGCGTGTTGAG
AACGCGATTGGCTCTTGGAGGCGCTGGGCTCGTCGCGTTGGGTGTATGCGTGATTGCTCTCGATCCGCGGGAGGAGCGCC
CGTCGATCGTAATATCCGAGGACGCTCAACTGGTCGGCCTCGTCACCGCTGATGCGATCGCGACCAATCGGAGCCGTCCG
CCGGAGTTCATCTTCTCGCAATGGCGGCGGGCGCTTGCCGTCTCAGAGCATGCAGTGCCGCTCGATCTCCCTGTGTACGC
GGGAAGCGACGTCGACACGGCAGCTTTGCTGGCTTCCGCCAAAGTGGGCGTTTTTACGTGCCGGAAAGGCACCGGGTGCG
TCGGTCGTAGCCGGGAAGGTTGGACAGTAGCGATTGTCGAAAAGGCCGAATTGGTGCCCCTCTTGTGCGGTCACGCCGAT
TTGGTCGTCGTTGCCAGCCGCCGGCCTGTGGCAGCCTGCCCGCCCGGCGCATCGCTGATCATAAGCACCAGGACGTTGCG
ACGCACGGGGTCCGTTGAAATTCATGCCGTGCCGGAGCAGGCGGGATCACCGCGCATGCAGGTCGTCGGCTCGTTCTCCT
CCACGGAAAGACCCTGGCAGCGTCATCGCCGCTATGACTGGCGGGCCGGCAGTTTCGTGCCTGAGGGGTCACCGCTTTGA

Upstream 100 bases:

>100_bases
CATTCTATCTGGTCTGCCTCATTTTTGAGCATTGACCTTCGAGTTGCAAGGTCGTCGCGTTGCCTGCATGATCGCTAAAG
TTGCGGCGCGCGGAGCGGAA

Downstream 100 bases:

>100_bases
GGCCGCGCGATCAACATCGCCCCATCTGCTGCCATATTCTTGATTATTGTACTCCACAATCTTGTCATTCCTCCATCGTT
TGTCGTAAAGAGCGTTGCGA

Product: ComEC/Rec2-like protein

Products: NA

Alternate protein names: Competence Protein; DNA Internalization-Related Competence; ComEC/Rec2 Family Protein; DNA Uptake Protein; ComEC/Rec2-Like Protein; DNA Translocation Competence Protein ComA; Competence Family Protein; Competence-Related DNA-Transformation Transporter Protein; DNA Internalization-Like Competence; DNA Translocation Competence Protein; DNA Translocation Competence; Competence Locus E; DNA Internalization-Related Competence Protein; ComE Operon; Metallo-Beta-Lactamase Superfamily Protein; Competence Related Membrane Protein; Transmembrane DNA Uptake Competence-Related Protein; DNA Uptake Protein ComEC; ComEc/Rec2-Like Protein; ComEC-Like Cytoplasmic Membrane Protein

Number of amino acids: Translated: 799; Mature: 798

Protein sequence:

>799_residues
MAESQVRIVLRDDEHSSPPPAEGTGVVAGKLAIASAGRAPADRRSATIRNRTRSTAAAVSRGISRAAAEEQEYGHGFVLV
PVVLALGSLAWFALPETVGTAKLAALLCVFGISALLCRGNLRPWRPLAVAPALFAAGMLLAAAETARRDTVILDAPVTTT
VRGTVLSRDPDDRGRWRYLVEIQETSNPRLRRAPERTTLLARSRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYV
KGLGAVGFFYGAPRALAGAASGRDIAETSLGERAAAYLAPVREAIGNRIRSAIGGDTGAIAAALVTGEERAISREAVETL
RAAGLSHVLAISGLNMVLAAGTFLIGARTLLSLIPGLAERHSAKKIAAVGALLMVFFYILISGGAVSAVRSWIMISIMLV
AVLFDRVSISLRNVALAALIILAWTPSAAAGPGFQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSSLAVGTVA
TSLIGGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYPLVIMGQGLDWMMAVARYVAALD
GEWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLVALGVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRP
PEFIFSQWRRALAVSEHAVPLDLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLCGHAD
LVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPEQAGSPRMQVVGSFSSTERPWQRHRRYDWRAGSFVPEGSPL

Sequences:

>Translated_799_residues
MAESQVRIVLRDDEHSSPPPAEGTGVVAGKLAIASAGRAPADRRSATIRNRTRSTAAAVSRGISRAAAEEQEYGHGFVLV
PVVLALGSLAWFALPETVGTAKLAALLCVFGISALLCRGNLRPWRPLAVAPALFAAGMLLAAAETARRDTVILDAPVTTT
VRGTVLSRDPDDRGRWRYLVEIQETSNPRLRRAPERTTLLARSRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYV
KGLGAVGFFYGAPRALAGAASGRDIAETSLGERAAAYLAPVREAIGNRIRSAIGGDTGAIAAALVTGEERAISREAVETL
RAAGLSHVLAISGLNMVLAAGTFLIGARTLLSLIPGLAERHSAKKIAAVGALLMVFFYILISGGAVSAVRSWIMISIMLV
AVLFDRVSISLRNVALAALIILAWTPSAAAGPGFQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSSLAVGTVA
TSLIGGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYPLVIMGQGLDWMMAVARYVAALD
GEWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLVALGVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRP
PEFIFSQWRRALAVSEHAVPLDLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLCGHAD
LVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPEQAGSPRMQVVGSFSSTERPWQRHRRYDWRAGSFVPEGSPL
>Mature_798_residues
AESQVRIVLRDDEHSSPPPAEGTGVVAGKLAIASAGRAPADRRSATIRNRTRSTAAAVSRGISRAAAEEQEYGHGFVLVP
VVLALGSLAWFALPETVGTAKLAALLCVFGISALLCRGNLRPWRPLAVAPALFAAGMLLAAAETARRDTVILDAPVTTTV
RGTVLSRDPDDRGRWRYLVEIQETSNPRLRRAPERTTLLARSRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYVK
GLGAVGFFYGAPRALAGAASGRDIAETSLGERAAAYLAPVREAIGNRIRSAIGGDTGAIAAALVTGEERAISREAVETLR
AAGLSHVLAISGLNMVLAAGTFLIGARTLLSLIPGLAERHSAKKIAAVGALLMVFFYILISGGAVSAVRSWIMISIMLVA
VLFDRVSISLRNVALAALIILAWTPSAAAGPGFQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSSLAVGTVAT
SLIGGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYPLVIMGQGLDWMMAVARYVAALDG
EWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLVALGVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRPP
EFIFSQWRRALAVSEHAVPLDLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLCGHADL
VVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPEQAGSPRMQVVGSFSSTERPWQRHRRYDWRAGSFVPEGSPL

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84097; Mature: 83966

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESQVRIVLRDDEHSSPPPAEGTGVVAGKLAIASAGRAPADRRSATIRNRTRSTAAAVS
CCCCEEEEEEECCCCCCCCCCCCCCEEEEHEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
RGISRAAAEEQEYGHGFVLVPVVLALGSLAWFALPETVGTAKLAALLCVFGISALLCRGN
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LRPWRPLAVAPALFAAGMLLAAAETARRDTVILDAPVTTTVRGTVLSRDPDDRGRWRYLV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECEEECCCCCCCCCEEEEE
EIQETSNPRLRRAPERTTLLARSRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYV
EEECCCCCHHHCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
KGLGAVGFFYGAPRALAGAASGRDIAETSLGERAAAYLAPVREAIGNRIRSAIGGDTGAI
HHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAALVTGEERAISREAVETLRAAGLSHVLAISGLNMVLAAGTFLIGARTLLSLIPGLAER
HHHEECCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHH
HSAKKIAAVGALLMVFFYILISGGAVSAVRSWIMISIMLVAVLFDRVSISLRNVALAALI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAWTPSAAAGPGFQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSSLAVGTVA
HHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TSLIGGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYPLV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IMGQGLDWMMAVARYVAALDGEWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLVAL
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHH
GVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRPPEFIFSQWRRALAVSEHAVP
HEEHEEECCCCCCCCEEEECCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
LDLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLCGHAD
EECCEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHEECCCC
LVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPEQAGSPRMQVVGSFSSTERPWQ
EEEEECCCCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHH
RHRRYDWRAGSFVPEGSPL
HHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AESQVRIVLRDDEHSSPPPAEGTGVVAGKLAIASAGRAPADRRSATIRNRTRSTAAAVS
CCCEEEEEEECCCCCCCCCCCCCCEEEEHEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
RGISRAAAEEQEYGHGFVLVPVVLALGSLAWFALPETVGTAKLAALLCVFGISALLCRGN
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LRPWRPLAVAPALFAAGMLLAAAETARRDTVILDAPVTTTVRGTVLSRDPDDRGRWRYLV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECEEECCCCCCCCCEEEEE
EIQETSNPRLRRAPERTTLLARSRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYV
EEECCCCCHHHCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
KGLGAVGFFYGAPRALAGAASGRDIAETSLGERAAAYLAPVREAIGNRIRSAIGGDTGAI
HHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAALVTGEERAISREAVETLRAAGLSHVLAISGLNMVLAAGTFLIGARTLLSLIPGLAER
HHHEECCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHH
HSAKKIAAVGALLMVFFYILISGGAVSAVRSWIMISIMLVAVLFDRVSISLRNVALAALI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAWTPSAAAGPGFQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSSLAVGTVA
HHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TSLIGGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYPLV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IMGQGLDWMMAVARYVAALDGEWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLVAL
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHH
GVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRPPEFIFSQWRRALAVSEHAVP
HEEHEEECCCCCCCCEEEECCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
LDLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLCGHAD
EECCEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHEECCCC
LVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPEQAGSPRMQVVGSFSSTERPWQ
EEEEECCCCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHH
RHRRYDWRAGSFVPEGSPL
HHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA