| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396361
Identifier: 150396361
GI number: 150396361
Start: 1210936
End: 1211823
Strand: Direct
Name: 150396361
Synonym: Smed_1142
Alternate gene names: NA
Gene position: 1210936-1211823 (Clockwise)
Preceding gene: 150396360
Following gene: 150396362
Centisome position: 32.02
GC content: 64.53
Gene sequence:
>888_bases ATGTCGGTGGCGATTCATCGCCTGCCGCAGTCAAAAGGCAGGCTCGCCATCATTGCCGGTGCCGGTGCACTTCCCCATCA TGTCGCCGAGGCGGCACGCCGTCAGGGGGAAAACCCGTTCATAATTGCGCTGTCGCGGGAGGCCGATGCCGATTGGACCG GCTTCGACCATACGGTTTGCGCAATCGGGGACTTTGCCGCAATCAGCCACACCTTCGAGGCCGAGAAGATCGATCGAGTG GTCCTTTCGGGTGCAGTGCGACGGCGTCCGGAGTGGCGCGATATTCGTCCTACATTGAAGACGCTGGCCAAGGTGCCGCG CGTTTTCCGCACCCTGATGTCCGGTGGTGACGATGCGGTCCTGCGCATGGTGATCGAGCTGATCGAGGCGAGCGGCGCAC ATGTGATCGGTGCGCACGAAGTCGTTCCTGGGCTTCTTGCGGATGTCGGTCCGCTTGGCAGGCACGCACCCACGGACGAG GACCAGCGCGACATCCGGGCAGGCATTGCCGCGGCAAATGCACTGGGTGCGCTCGACGTCGGCCAGGGTGCCGTCGCCGT CGGCGGCAGGGTTGTGGCGCTTGAAGGCGCGGAAGGAACGGACGCCATGTTGGCGAGAGTTTCCGACCTCAGGAAAGACG GGCGAATATCCGTCCGCCGCCGCGGTGTTCTCGTGAAGCTCTGCAAACCGCAACAGGACGAGCGGGCGGACCTGCCTTCG ATCGGTCCGTCAACCGTTGCAGAAGCGCATGCAGCCGGCCTCGCGGGCATTGCCATCGAGGCGGGGCGCGCGCTGGTTCT GGAGCGGACACGCCTTGTGGAGGCGGCCGACAGGAGCGGTATGTTTGTACTGGGTATCGAGCGCAATCTCCGCAGGGAGC GGGAATGA
Upstream 100 bases:
>100_bases ACGAGTATCTCGATTGCGCACCGGCTCTAGAGATCCTGGACTTTATCGCCGCCGAGAGCGACCGCGCGCTGTCGTCGCCG AATCGCGGCGCCAAAGGCTG
Downstream 100 bases:
>100_bases CCGATAGAGCCTACAGGCTGGCGGTCATCGCCGGCGAAGTTTCCGGCGACCTGCTCGGCGCCGACCTCGTGCGGGCCCTG CGCGATCGGGCGGACGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: UDP-2 3-Diacylglucosamine Pyrophosphatase
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSVAIHRLPQSKGRLAIIAGAGALPHHVAEAARRQGENPFIIALSREADADWTGFDHTVCAIGDFAAISHTFEAEKIDRV VLSGAVRRRPEWRDIRPTLKTLAKVPRVFRTLMSGGDDAVLRMVIELIEASGAHVIGAHEVVPGLLADVGPLGRHAPTDE DQRDIRAGIAAANALGALDVGQGAVAVGGRVVALEGAEGTDAMLARVSDLRKDGRISVRRRGVLVKLCKPQQDERADLPS IGPSTVAEAHAAGLAGIAIEAGRALVLERTRLVEAADRSGMFVLGIERNLRRERE
Sequences:
>Translated_295_residues MSVAIHRLPQSKGRLAIIAGAGALPHHVAEAARRQGENPFIIALSREADADWTGFDHTVCAIGDFAAISHTFEAEKIDRV VLSGAVRRRPEWRDIRPTLKTLAKVPRVFRTLMSGGDDAVLRMVIELIEASGAHVIGAHEVVPGLLADVGPLGRHAPTDE DQRDIRAGIAAANALGALDVGQGAVAVGGRVVALEGAEGTDAMLARVSDLRKDGRISVRRRGVLVKLCKPQQDERADLPS IGPSTVAEAHAAGLAGIAIEAGRALVLERTRLVEAADRSGMFVLGIERNLRRERE >Mature_294_residues SVAIHRLPQSKGRLAIIAGAGALPHHVAEAARRQGENPFIIALSREADADWTGFDHTVCAIGDFAAISHTFEAEKIDRVV LSGAVRRRPEWRDIRPTLKTLAKVPRVFRTLMSGGDDAVLRMVIELIEASGAHVIGAHEVVPGLLADVGPLGRHAPTDED QRDIRAGIAAANALGALDVGQGAVAVGGRVVALEGAEGTDAMLARVSDLRKDGRISVRRRGVLVKLCKPQQDERADLPSI GPSTVAEAHAAGLAGIAIEAGRALVLERTRLVEAADRSGMFVLGIERNLRRERE
Specific function: Unknown
COG id: COG3494
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31386; Mature: 31255
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAIHRLPQSKGRLAIIAGAGALPHHVAEAARRQGENPFIIALSREADADWTGFDHTVC CCCEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHH AIGDFAAISHTFEAEKIDRVVLSGAVRRRPEWRDIRPTLKTLAKVPRVFRTLMSGGDDAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH LRMVIELIEASGAHVIGAHEVVPGLLADVGPLGRHAPTDEDQRDIRAGIAAANALGALDV HHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC GQGAVAVGGRVVALEGAEGTDAMLARVSDLRKDGRISVRRRGVLVKLCKPQQDERADLPS CCCCEEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCC IGPSTVAEAHAAGLAGIAIEAGRALVLERTRLVEAADRSGMFVLGIERNLRRERE CCHHHHHHHHHCCHHHEEHHCCCEEEHHHHHHHHHHCCCCEEEEECCHHHHCCCC >Mature Secondary Structure SVAIHRLPQSKGRLAIIAGAGALPHHVAEAARRQGENPFIIALSREADADWTGFDHTVC CCEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHH AIGDFAAISHTFEAEKIDRVVLSGAVRRRPEWRDIRPTLKTLAKVPRVFRTLMSGGDDAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH LRMVIELIEASGAHVIGAHEVVPGLLADVGPLGRHAPTDEDQRDIRAGIAAANALGALDV HHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC GQGAVAVGGRVVALEGAEGTDAMLARVSDLRKDGRISVRRRGVLVKLCKPQQDERADLPS CCCCEEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCC IGPSTVAEAHAAGLAGIAIEAGRALVLERTRLVEAADRSGMFVLGIERNLRRERE CCHHHHHHHHHCCHHHEEHHCCCEEEHHHHHHHHHHCCCCEEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA