Click here to switch to the map view.

The map label for this gene is 150396323

Identifier: 150396323

GI number: 150396323

Start: 1173892

End: 1174494

Strand: Direct

Name: 150396323

Synonym: Smed_1104

Alternate gene names: NA

Gene position: 1173892-1174494 (Clockwise)

Preceding gene: 150396322

Following gene: 150396328

Centisome position: 31.04

GC content: 61.36

Gene sequence:

>947_bases
ATGGCGAGACCTTTTTCGAATGATCTTCGGGAACGCGTTGTCGATGCGGTGACGGGCGAGGGCCTATCGTGCCGGGCAGC
GGCCAAGCGCTTCGGCATCGGCATCAGCACCGCGATCGATTGGGTGCGGCGGTTTCGCGAGACGGGCAGCGCCGCACCCG
GCCAGATGGGTGGGCACAAGCCCCGCAAGCTTTCCGGTCCGCACCGGGCTTGGCTGCTTTGCCGCTGCCGCGAGCGCGAC
TTCACGCTGCACGGACTTGTCGCCGAGTTGAGCGAGCGCGGCCTGAAGGTGGATTATCGCGCCGTCTGGACCTTCGTGCA
CGAAGAGGGGTTGAGTTATAAAAAAAGACGCTGGTCGCCAGCGAACGGGAGCGGCCCGACGTCGCCCGCCACCGGGCACG
ATGGCTGAAGCACTGCCCCGGAATTGATCCCGCCCGCCTCGTTTTCATCGATGAGACCTGGACGAAGACGAACATGGCGC
CGCTGCGGGGCTGGGCGCCTCGCGGCGAACGACTGGTGGGCTACGCCCCCTTCGGCCATTGGAACACCATGACCTTTGTC
GCCGCACTCAGGGCCGACCGCGTCAGCGCTCCCTTTATCCTCGATGGCCCGATCAATGGCGAACGCTTCCGCATCTATGT
CCAGCAAGTTCTGGTGCCGGAACTCAAAGCCGGCGACATCGTCATCCTGGACAATCTCGGCTCCCATAAGGGTCAGGAGA
TCCGCGCCGCCATCCGTAAGGCCGGCGCCCGCCTGTTCTTTCTGCCGAAATATTCCCCCGATCTCAATCCGATCGAAAAG
CTCTTCGCCAAAATCAAGCACTGGTTGCGTGAGGCACAGGCCAGATCACGCGATGCAATCCATGACGAACTGCGCCACAT
TCTCCAAGCCGTCACCCCACAGGAATGCGCAGCCTACTTCAAAGAGGCGGGATATGAACGGGCTTAA

Upstream 100 bases:

>100_bases
ACTTCTAGAGCGGGATGCATTTAGGCGGAATCGGAAAGGGGATTCCTTTTTCTGCGCAAATCAGATTCACCATTCAGGCC
GGTGAAGGAGGCCGGCCTTT

Downstream 100 bases:

>100_bases
ATACATACCGCTCTAGATGGACCTATCGCCTCGGCGCCCCGAGGATCAGCCAACGAATGCGCGTTCGATGACGAACTCGG
CCGGCTTGTTGTTGGCACCT

Product: transposase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>315_residues
MARPFSNDLRERVVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWLLCRCRERD
FTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKKKTLVASERERPDVARHRARWLKHCPGIDPARLVFIDETWTKTNMA
PLRGWAPRGERLVGYAPFGHWNTMTFVAALRADRVSAPFILDGPINGERFRIYVQQVLVPELKAGDIVILDNLGSHKGQE
IRAAIRKAGARLFFLPKYSPDLNPIEKLFAKIKHWLREAQARSRDAIHDELRHILQAVTPQECAAYFKEAGYERA

Sequences:

>Translated_201_residues
LSPFISRLFEVGCAFLWGDGLENVAQFVMDCIA*SGLCLTQPVLDFGEELFDRIEIGGIFRQKEQAGAGLTDGGADLLTL
MGAEIVQDDDVAGFEFRHQNLLDIDAEAFAIDRAIEDKGSADAVGPECGDKGHGVPMAEGGVAHQSFAARRPAPQRRHVR
LRPGLIDENEAGGINSGAVLQPSCPVAGDVGPLPFAGDQRL
>Mature_201_residues
LSPFISRLFEVGCAFLWGDGLENVAQFVMDCIA*SGLCLTQPVLDFGEELFDRIEIGGIFRQKEQAGAGLTDGGADLLTL
MGAEIVQDDDVAGFEFRHQNLLDIDAEAFAIDRAIEDKGSADAVGPECGDKGHGVPMAEGGVAHQSFAARRPAPQRRHVR
LRPGLIDENEAGGINSGAVLQPSCPVAGDVGPLPFAGDQRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21126; Mature: 21126

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LSPFISRLFEVGCAFLWGDGLENVAQFVMDCIASGLCLTQPVLDFGEELFDRIEIGGIFR
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKEQAGAGLTDGGADLLTLMGAEIVQDDDVAGFEFRHQNLLDIDAEAFAIDRAIEDKGSA
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCC
DAVGPECGDKGHGVPMAEGGVAHQSFAARRPAPQRRHVRLRPGLIDENEAGGINSGAVLQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEC
PSCPVAGDVGPLPFAGDQRL
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA