| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396284
Identifier: 150396284
GI number: 150396284
Start: 1131391
End: 1132275
Strand: Direct
Name: 150396284
Synonym: Smed_1063
Alternate gene names: NA
Gene position: 1131391-1132275 (Clockwise)
Preceding gene: 150396282
Following gene: 150396285
Centisome position: 29.92
GC content: 61.24
Gene sequence:
>885_bases GTGATTATGTCCACAATTCATTTCGCAATCCGGGGTCTGATCGGAGCGTTTGTCCTGGCGGGTATGGTCGCTTCGGCGAG AGCCGAGCCTCTCAAACCCTACAAGGATGCACTGTTCGGTCATGCCAGACTGCTTCAGGAGGCGGACGGCGGTGATTTTC GCGTTGTCGACTATCAGGAGCTACGCGATATCAACCAACGCGACCAGATAGCCGAGCGGCGGGTAAAGCGCGCCTATTTG TCGCTCGGCGTCAGGAGCGTTCAGGTGAACGAGACGCTCGATCTCGGCGGGCGCAGGCTGGACGTCGCCCGCGTCGGCCC CGATCGCGGCGCTGCCTTCACCGTGCTTTTCATTCATGGACGCGGCGGCGACCGTCGCCTTGGCGCCAACGACTTCTCCT TCGGCGGAAATTTCAATCGGCTCAAAAATCTTGCCGTCGCCAATGGCGGCACCTACTACGCGCCGAGCATCCGATCGTTC GACGCTGCGGGCGTCGCGGATATTTCGGCACTGATCCGTTTCGCCGCCGAGCGCTCCGGCGGGCGGCCGGTGGTGCTTTC CTGTGCCTCCATGGGAAGCTTCATCTGTTGGGGGATCGCGCGCGAAGAGGCCGCCGTCTTGAACCTCGACGGGATGATGG TCATGGGCGGTCCCGCCGATCCCGGCTTCAACAAGAGCGCCGCCTACCGCGCGCGGCTGCCGATGTTCTTCAGCCATGGG AGCCGCGACAGCGTCTATCCGGCCAAGTCACAGATTGCCTTTTACCGCAGCCTCAGATCGAAGGACTATCCCACCCGTTT CGTTCTGTTCGAAACAGGTTCGCATGGAACTCCGATCAGAATGACGGATTGGCGAGAGGCACTGAATTGGTTCCTTGACC GCTGA
Upstream 100 bases:
>100_bases CGAGGTAGAAATACCCTTTGATGAGCCGGATTTTCCACGTCAGTGTTGCTTGGCAGAGGTGCCGGTGGCAAGGCATGCGC CGAACGAGGGAGCCGATCGG
Downstream 100 bases:
>100_bases CGGCGCGGTCGATGGAGGAGTTGAGGCGGCAATGAGAATGGACGACTTCGAAAGCGCGGCGCGTTCTGGAAGGCGGCCTC GGCCGTCCATTTCCCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phospholipase/Carboxylesterase Family Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIMSTIHFAIRGLIGAFVLAGMVASARAEPLKPYKDALFGHARLLQEADGGDFRVVDYQELRDINQRDQIAERRVKRAYL SLGVRSVQVNETLDLGGRRLDVARVGPDRGAAFTVLFIHGRGGDRRLGANDFSFGGNFNRLKNLAVANGGTYYAPSIRSF DAAGVADISALIRFAAERSGGRPVVLSCASMGSFICWGIAREEAAVLNLDGMMVMGGPADPGFNKSAAYRARLPMFFSHG SRDSVYPAKSQIAFYRSLRSKDYPTRFVLFETGSHGTPIRMTDWREALNWFLDR
Sequences:
>Translated_294_residues MIMSTIHFAIRGLIGAFVLAGMVASARAEPLKPYKDALFGHARLLQEADGGDFRVVDYQELRDINQRDQIAERRVKRAYL SLGVRSVQVNETLDLGGRRLDVARVGPDRGAAFTVLFIHGRGGDRRLGANDFSFGGNFNRLKNLAVANGGTYYAPSIRSF DAAGVADISALIRFAAERSGGRPVVLSCASMGSFICWGIAREEAAVLNLDGMMVMGGPADPGFNKSAAYRARLPMFFSHG SRDSVYPAKSQIAFYRSLRSKDYPTRFVLFETGSHGTPIRMTDWREALNWFLDR >Mature_294_residues MIMSTIHFAIRGLIGAFVLAGMVASARAEPLKPYKDALFGHARLLQEADGGDFRVVDYQELRDINQRDQIAERRVKRAYL SLGVRSVQVNETLDLGGRRLDVARVGPDRGAAFTVLFIHGRGGDRRLGANDFSFGGNFNRLKNLAVANGGTYYAPSIRSF DAAGVADISALIRFAAERSGGRPVVLSCASMGSFICWGIAREEAAVLNLDGMMVMGGPADPGFNKSAAYRARLPMFFSHG SRDSVYPAKSQIAFYRSLRSKDYPTRFVLFETGSHGTPIRMTDWREALNWFLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32369; Mature: 32369
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMSTIHFAIRGLIGAFVLAGMVASARAEPLKPYKDALFGHARLLQEADGGDFRVVDYQE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHH LRDINQRDQIAERRVKRAYLSLGVRSVQVNETLDLGGRRLDVARVGPDRGAAFTVLFIHG HHCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCEEEEEEECCCCCCEEEEEEEEC RGGDRRLGANDFSFGGNFNRLKNLAVANGGTYYAPSIRSFDAAGVADISALIRFAAERSG CCCCCCCCCCCCCCCCCHHHHHHEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCC GRPVVLSCASMGSFICWGIAREEAAVLNLDGMMVMGGPADPGFNKSAAYRARLPMFFSHG CCEEEEEECCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCHHHCCCCCEECCC SRDSVYPAKSQIAFYRSLRSKDYPTRFVLFETGSHGTPIRMTDWREALNWFLDR CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MIMSTIHFAIRGLIGAFVLAGMVASARAEPLKPYKDALFGHARLLQEADGGDFRVVDYQE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHH LRDINQRDQIAERRVKRAYLSLGVRSVQVNETLDLGGRRLDVARVGPDRGAAFTVLFIHG HHCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCEEEEEEECCCCCCEEEEEEEEC RGGDRRLGANDFSFGGNFNRLKNLAVANGGTYYAPSIRSFDAAGVADISALIRFAAERSG CCCCCCCCCCCCCCCCCHHHHHHEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCC GRPVVLSCASMGSFICWGIAREEAAVLNLDGMMVMGGPADPGFNKSAAYRARLPMFFSHG CCEEEEEECCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCHHHCCCCCEECCC SRDSVYPAKSQIAFYRSLRSKDYPTRFVLFETGSHGTPIRMTDWREALNWFLDR CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA