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The map label for this gene is yafK [C]

Identifier: 150395748

GI number: 150395748

Start: 567175

End: 567717

Strand: Direct

Name: yafK [C]

Synonym: Smed_0524

Alternate gene names: 150395748

Gene position: 567175-567717 (Clockwise)

Preceding gene: 150395747

Following gene: 150395749

Centisome position: 15.0

GC content: 56.72

Gene sequence:

>543_bases
ATGCGGCCGCCCCGTTTTCTTTGGGGCTGCTGGTTCTGGATGAGGATAGTGAAAATCGCCTGGATGATGACGCTGTTTGC
GGCGACTGTCGCCTTTCCATTATCGGCCTTGGCCGCCGAAACCGCAGACAAGGTTATCGTCTTCAAGGAGCGGCGCGTGC
TGCAATTGTTCCAGGGTGAGAAGCTGCTGCGGGAATACCCGGTCGTGCTCGGCGGCAATCCGGTCGGACCCAAGAGGAGG
GAGGGCGATCAGAAGACGCCGGAGGGCTCCTACGTCCTCGATTGGCGCAATCCTGGCAGCAGCTTCTATAAATCCATTCA
CATTTCCTATCCCGCACCGAAGGACCTGGAGGAAGCGGCCGCCAGGTATGTCGAACCCGGCGGAATGATCATGATCCATG
GCCAGCCCAATTATCTCGGCTGGCTGGCGTTTTTGACGCAGATGTTCGATTGGACGAATGGCTGCATTGCCGTTACCAAT
GCGGAAATGGACGAAATCTGGGACATGGTTCCCAACAATACCCCGATCGTGATCAATCCATGA

Upstream 100 bases:

>100_bases
TCTTCCTGTTCTTCTCCATCTACATCTGGGGTGGCTGGGGTGCGCCGATTGCGCATGGCTGACGCGATTTCGGACTGATG
ATGGCGGGGCGGCTGCAGGG

Downstream 100 bases:

>100_bases
ACGAAGACATCAATCCATGAATGAAGACAGGGCGCTCTACCCACCCGTTGATCCGGTCATGACGGGCGTCAAGGGACTCT
GCCCGCGCTGCGGCCAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRPPRFLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGEKLLREYPVVLGGNPVGPKRR
EGDQKTPEGSYVLDWRNPGSSFYKSIHISYPAPKDLEEAAARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTN
AEMDEIWDMVPNNTPIVINP

Sequences:

>Translated_180_residues
MRPPRFLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGEKLLREYPVVLGGNPVGPKRR
EGDQKTPEGSYVLDWRNPGSSFYKSIHISYPAPKDLEEAAARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTN
AEMDEIWDMVPNNTPIVINP
>Mature_180_residues
MRPPRFLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGEKLLREYPVVLGGNPVGPKRR
EGDQKTPEGSYVLDWRNPGSSFYKSIHISYPAPKDLEEAAARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTN
AEMDEIWDMVPNNTPIVINP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786418, Length=134, Percent_Identity=35.0746268656716, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20553; Mature: 20553

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPRFLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCH
KLLREYPVVLGGNPVGPKRREGDQKTPEGSYVLDWRNPGSSFYKSIHISYPAPKDLEEAA
HHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHEEEEECCCCCCCHHHHH
ARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTNAEMDEIWDMVPNNTPIVINP
HHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCEEECC
>Mature Secondary Structure
MRPPRFLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCH
KLLREYPVVLGGNPVGPKRREGDQKTPEGSYVLDWRNPGSSFYKSIHISYPAPKDLEEAA
HHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHEEEEECCCCCCCHHHHH
ARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTNAEMDEIWDMVPNNTPIVINP
HHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA