| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395734
Identifier: 150395734
GI number: 150395734
Start: 554223
End: 554711
Strand: Direct
Name: 150395734
Synonym: Smed_0510
Alternate gene names: NA
Gene position: 554223-554711 (Clockwise)
Preceding gene: 150395732
Following gene: 150395735
Centisome position: 14.65
GC content: 61.15
Gene sequence:
>489_bases ATGGTGCGCTCTGGCGAGTCTGACAGGATTGACGTGCAAGACATAGCAAAGCGGAACGATGGCAAGAAGGGTCTTTCCTT CGCATTGCTGCGCGGAGCGGCAATTTGCCTGCCAATTCTCTCCCTTGCCGGATGCATGGGCGCCGGCCTGGACGTCTTCG GAGGCTCGGGCGTCGATCGCACGGTTTCCACCGGGACTGTGCCGGTGGCCAAAACATCGGACGGCCTCTCCGATGCCATT GCCGTGCGTGACCTCGTCACCGCCGCCGACATCAGCCAAGGCAGCGACAGCAGCATTCCCTGGGCCAACGCAAATTCCGG CAGCGCCGGTGTCATCAGCAGCATCCAGGAAGACAATGCGTCGGGCATGCGTTGCCGCCGCTTCACGACGACCCGGCATT CTTTCGAAGGCATCGCAAAATTCGATGGCAATACCTGCCAGCTCGGCAACGGAGAATGGTACCTGACGAGCTTCGGCCCA CGAAGCTGA
Upstream 100 bases:
>100_bases TCCAATGCCGTGTGTCTGGCGCGGGAACGCTCCGGGATGAGCCCGATTCGTGTTTCCGCACCGTAAAGTATCAGAGCCTG CCTGCGAACTTCCTCGCGAT
Downstream 100 bases:
>100_bases AATCGCAGGTTAACCATGTTGCCGCAAAGCAGCCCGCGAAACGCGCCGGACGATTTTTCGAGAAGGTCGTCCGCCTGCCA CTAACCGATAGTTAGCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MVRSGESDRIDVQDIAKRNDGKKGLSFALLRGAAICLPILSLAGCMGAGLDVFGGSGVDRTVSTGTVPVAKTSDGLSDAI AVRDLVTAADISQGSDSSIPWANANSGSAGVISSIQEDNASGMRCRRFTTTRHSFEGIAKFDGNTCQLGNGEWYLTSFGP RS
Sequences:
>Translated_162_residues MVRSGESDRIDVQDIAKRNDGKKGLSFALLRGAAICLPILSLAGCMGAGLDVFGGSGVDRTVSTGTVPVAKTSDGLSDAI AVRDLVTAADISQGSDSSIPWANANSGSAGVISSIQEDNASGMRCRRFTTTRHSFEGIAKFDGNTCQLGNGEWYLTSFGP RS >Mature_162_residues MVRSGESDRIDVQDIAKRNDGKKGLSFALLRGAAICLPILSLAGCMGAGLDVFGGSGVDRTVSTGTVPVAKTSDGLSDAI AVRDLVTAADISQGSDSSIPWANANSGSAGVISSIQEDNASGMRCRRFTTTRHSFEGIAKFDGNTCQLGNGEWYLTSFGP RS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16793; Mature: 16793
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSGESDRIDVQDIAKRNDGKKGLSFALLRGAAICLPILSLAGCMGAGLDVFGGSGVDR CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC TVSTGTVPVAKTSDGLSDAIAVRDLVTAADISQGSDSSIPWANANSGSAGVISSIQEDNA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC SGMRCRRFTTTRHSFEGIAKFDGNTCQLGNGEWYLTSFGPRS CCCEEEEEECCCCCCCCCEECCCCEEEECCCCEEEECCCCCC >Mature Secondary Structure MVRSGESDRIDVQDIAKRNDGKKGLSFALLRGAAICLPILSLAGCMGAGLDVFGGSGVDR CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC TVSTGTVPVAKTSDGLSDAIAVRDLVTAADISQGSDSSIPWANANSGSAGVISSIQEDNA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC SGMRCRRFTTTRHSFEGIAKFDGNTCQLGNGEWYLTSFGPRS CCCEEEEEECCCCCCCCCEECCCCEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA