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The map label for this gene is atpF [H]

Identifier: 150395675

GI number: 150395675

Start: 486973

End: 487458

Strand: Direct

Name: atpF [H]

Synonym: Smed_0450

Alternate gene names: 150395675

Gene position: 486973-487458 (Clockwise)

Preceding gene: 150395674

Following gene: 150395678

Centisome position: 12.88

GC content: 60.08

Gene sequence:

>486_bases
ATGGCACTTGATGCGACTTTCTATGCCCTCGTAGGTCTGATTCTCTTCTTTGTCCTGATCGCCTACCTCAAGGTTCCTGG
GATGGTCGGCAAGGCGCTTGACGCGCGCGCCGACAAGATCAGCAATGAGCTGGCGGAAGCCAAGCGCCTGCGTGAAGAGG
CACAGAGCCTCGTGGCCGAGTACCAGCGCAAGCGCAAGGATGCCGAAGCCGAAGCCGCGAGCATTGTCGCCGCGGCCCAG
CGCGAAGCGGAAATGCTGACGGCAGAGGCCAAGCAGAAGACGGAGGAATTTGTCGCACGTCGCACGGCACTTTCCGAACA
GAAGATCAAGCAGGCCGAAAGCGATGCGATCAATGCCGTTCGCGCTGCTGCCGTAGACCTGGCAATCAGCGCAGCCGAAA
AGGTGATTGCGAGCAAGGCGGATGCCAGTGCCCAGGAAACGCTCTTCCAGAAGGCTCTCGGCGAGGTAAAGTCCCGCCTG
AACTGA

Upstream 100 bases:

>100_bases
GCAACGGCCATAGTCAAGCAATTGATCGGCGGTACCGTCACCAAGTCCGAGATCGCTGCGGCGTTCAAGGCCTCGGCCGG
CAACTGAGGAAACGAGAACC

Downstream 100 bases:

>100_bases
GGGGTTGTCCCCGTGGAAATTGGAAGCCCCGCTTGGCGACTCGCTTAGCGGGGCTTTTTCGTCGGAATCGTCCGGCGCGG
CTGTGGACGCGCCTTCCTAT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MALDATFYALVGLILFFVLIAYLKVPGMVGKALDARADKISNELAEAKRLREEAQSLVAEYQRKRKDAEAEAASIVAAAQ
REAEMLTAEAKQKTEEFVARRTALSEQKIKQAESDAINAVRAAAVDLAISAAEKVIASKADASAQETLFQKALGEVKSRL
N

Sequences:

>Translated_161_residues
MALDATFYALVGLILFFVLIAYLKVPGMVGKALDARADKISNELAEAKRLREEAQSLVAEYQRKRKDAEAEAASIVAAAQ
REAEMLTAEAKQKTEEFVARRTALSEQKIKQAESDAINAVRAAAVDLAISAAEKVIASKADASAQETLFQKALGEVKSRL
N
>Mature_160_residues
ALDATFYALVGLILFFVLIAYLKVPGMVGKALDARADKISNELAEAKRLREEAQSLVAEYQRKRKDAEAEAASIVAAAQR
EAEMLTAEAKQKTEEFVARRTALSEQKIKQAESDAINAVRAAAVDLAISAAEKVIASKADASAQETLFQKALGEVKSRLN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 17412; Mature: 17281

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDATFYALVGLILFFVLIAYLKVPGMVGKALDARADKISNELAEAKRLREEAQSLVAE
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQRKRKDAEAEAASIVAAAQREAEMLTAEAKQKTEEFVARRTALSEQKIKQAESDAINAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAAVDLAISAAEKVIASKADASAQETLFQKALGEVKSRLN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALDATFYALVGLILFFVLIAYLKVPGMVGKALDARADKISNELAEAKRLREEAQSLVAE
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQRKRKDAEAEAASIVAAAQREAEMLTAEAKQKTEEFVARRTALSEQKIKQAESDAINAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAAVDLAISAAEKVIASKADASAQETLFQKALGEVKSRLN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]