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The map label for this gene is cheD [H]

Identifier: 150395467

GI number: 150395467

Start: 263715

End: 264266

Strand: Direct

Name: cheD [H]

Synonym: Smed_0240

Alternate gene names: 150395467

Gene position: 263715-264266 (Clockwise)

Preceding gene: 150395466

Following gene: 150395468

Centisome position: 6.97

GC content: 64.31

Gene sequence:

>552_bases
ATGAACACCGAGGCTGCCGGCAAGCGCGTCCACGTCATTCAGGGCGAGTTCAAGGTTGTCAACGATCCCCATATCGTGCT
TTCGACCATTCTCGGCTCCTGCGTGGCCGCCTGCCTGCGCGATCCGGTGACCGGCGTCGGGGGCATGAATCACTTCCTGC
TGCCGGGCTCCGCAAGCTCGCCGAGTTCGGGTGCGGACGCAACGCGCTACGGCGTGCACCTGATGGAGCTTCTCATCAAC
GGCCTTCTGAAGCAGGGGGCGCGCCGCGATCGGCTGGAGGCGAAAATTTTCGGTGGCGCCCGGACGATCGCGCGCTTCTC
GAATGTCGGCGAGCAGAATGCCGCTTTCGCGCGCCGGTTCCTGATGGACGAAGGTATCCGCATCGTCGGCGAGAGCACTG
GAGGCGACCACGGACGCAAGCTAGAATATTGGCCGTCGTCGGGACGGGCCCGCCAATATGCCCTGACCGGAGTGGAGGCA
CAGCGCGCCATGCAGATGGACCAGCGGCCCGCCGCGCCGAAGCCGGTAGAAAGCTCCATTGAATTCTTCTGA

Upstream 100 bases:

>100_bases
TGCAGAAGGCGGCCGCCCTCGGCGCCAACAACGTGCTGGCCAAGCCATTCACGATCGAAAAGATGAAGGCGGCGATCGAG
GCCGTGTTCGGGGCGCTGAA

Downstream 100 bases:

>100_bases
TCGTGCCGGTCGTCAGCGCCGGCGATTTCGTCTCGCATGCCTCGTGAGGAAATAATGAAGCCAGACCACAACCATGTACC
TCATGCGGAAGAATCCTTGC

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNTEAAGKRVHVIQGEFKVVNDPHIVLSTILGSCVAACLRDPVTGVGGMNHFLLPGSASSPSSGADATRYGVHLMELLIN
GLLKQGARRDRLEAKIFGGARTIARFSNVGEQNAAFARRFLMDEGIRIVGESTGGDHGRKLEYWPSSGRARQYALTGVEA
QRAMQMDQRPAAPKPVESSIEFF

Sequences:

>Translated_183_residues
MNTEAAGKRVHVIQGEFKVVNDPHIVLSTILGSCVAACLRDPVTGVGGMNHFLLPGSASSPSSGADATRYGVHLMELLIN
GLLKQGARRDRLEAKIFGGARTIARFSNVGEQNAAFARRFLMDEGIRIVGESTGGDHGRKLEYWPSSGRARQYALTGVEA
QRAMQMDQRPAAPKPVESSIEFF
>Mature_183_residues
MNTEAAGKRVHVIQGEFKVVNDPHIVLSTILGSCVAACLRDPVTGVGGMNHFLLPGSASSPSSGADATRYGVHLMELLIN
GLLKQGARRDRLEAKIFGGARTIARFSNVGEQNAAFARRFLMDEGIRIVGESTGGDHGRKLEYWPSSGRARQYALTGVEA
QRAMQMDQRPAAPKPVESSIEFF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 19754; Mature: 19754

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEAAGKRVHVIQGEFKVVNDPHIVLSTILGSCVAACLRDPVTGVGGMNHFLLPGSASS
CCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
PSSGADATRYGVHLMELLINGLLKQGARRDRLEAKIFGGARTIARFSNVGEQNAAFARRF
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
LMDEGIRIVGESTGGDHGRKLEYWPSSGRARQYALTGVEAQRAMQMDQRPAAPKPVESSI
HHHCCCEEEECCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
EFF
CCC
>Mature Secondary Structure
MNTEAAGKRVHVIQGEFKVVNDPHIVLSTILGSCVAACLRDPVTGVGGMNHFLLPGSASS
CCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
PSSGADATRYGVHLMELLINGLLKQGARRDRLEAKIFGGARTIARFSNVGEQNAAFARRF
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
LMDEGIRIVGESTGGDHGRKLEYWPSSGRARQYALTGVEAQRAMQMDQRPAAPKPVESSI
HHHCCCEEEECCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
EFF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7623670; 11481430 [H]