Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395443

Identifier: 150395443

GI number: 150395443

Start: 240867

End: 241949

Strand: Direct

Name: 150395443

Synonym: Smed_0216

Alternate gene names: NA

Gene position: 240867-241949 (Clockwise)

Preceding gene: 150395442

Following gene: 150395444

Centisome position: 6.37

GC content: 59.19

Gene sequence:

>1083_bases
ATGAAGGCGCGTAGCTCCGGAAATCTTCTTGCGCTTGCATCCTGCCTCAATGGCAGGCCTCCGACCGGCGTCGATTGGGA
GCAGGTCATCGCACTTGCGAATGAAAGCCTGACGGTTGCTTCCCTGGCGGTCGCGGCGAGAAAATACGCGGATGACATAC
CAGAGGATGTCCGCCAATACCTATCGCTGATCTACGACAGAAATGCGCAGCGCAATCGCAGATTGCTGGCGCAGCTGACG
GAGGCGGCATCTTGTCTCAATCGCATCGGCGTCGAGCCCGTCCTGATGAAGGGCGCGGCAATCCTGATCTCTCAGAAAAT
GGACGAAATCGGAGCGCGGATGCTGACGGACCTGGACATTCTCGTCCGCCCCGCCGATATGGTCTCATCGATCGGCGCGT
TGAAGGACATCGGATACGAGGTTCGGCTTGCCGGGGGCAACGGGTCCTGGCCGGGCAACCGCAAGTTTCACCTGCCCGCC
GTGCTGGAGCGCCCGACGGATGCGGGAAGTATCGACCTTCAATGCCGGCCGAAGGGCCCAGCCTCCTTCAGTGACATGGA
ATGGCTGGACGGGCACAGCCGCAAGGTCGACCTTGATGGAGGAAAGTTCCATATACCGTCGGCTTTTGCCCAGATTGTTT
TCCTGATCTTGCACGATCAGTTCCAGGACGGGGACTACTGGCGCGGCCTGATCGATCTGCGACACCTTCTCGATCTGTCG
AAGCTCGCAGCTTCGGAAGATGTCGACTGGAAGCAGTTGATGTCGCTTTTCGCCAGAGGATACGAGAGAAATGCGGTTGA
GACACAAATCCTGACGGCTGACAAATTGTTCGGGATAAATGGTGCTCCCGATTTGTCCGCCGGGAAGCTGCCGCGGTTTC
AATTGCAAAGGCGATGGGTCCAGCTCGGAAGGGATTATCTTTTCGTCCCCTCCACGGTTTTCACGCTCCTGAGCGAGCTT
TCCCACTACCGGTCCTGGGACCGGTACGGCGGTGAGCCATATCCGTCGCGGCGTCAGGAGGCGGGTCGCAAGATCCGCGA
GCTGCGACGCGTATTCCGCCCGAGGGCGTCCGGAAAGATCTAG

Upstream 100 bases:

>100_bases
CCGCAATTCGACGCTTTGCTGAGTGCTGTCCGCGGCGCCAGCGCCATCGAGCTATCCTATACGCGGCTGGATGAGGCCGT
AGAGATGCTGAGCAGCCATC

Downstream 100 bases:

>100_bases
CCACATCAATATTTCAAAGTGAAAATACCATGCGTCTTTGTATCGTACGAAAGATAAGGCGAATTATTCCTTGTAGCGTC
TTGTGATTAATCAATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKARSSGNLLALASCLNGRPPTGVDWEQVIALANESLTVASLAVAARKYADDIPEDVRQYLSLIYDRNAQRNRRLLAQLT
EAASCLNRIGVEPVLMKGAAILISQKMDEIGARMLTDLDILVRPADMVSSIGALKDIGYEVRLAGGNGSWPGNRKFHLPA
VLERPTDAGSIDLQCRPKGPASFSDMEWLDGHSRKVDLDGGKFHIPSAFAQIVFLILHDQFQDGDYWRGLIDLRHLLDLS
KLAASEDVDWKQLMSLFARGYERNAVETQILTADKLFGINGAPDLSAGKLPRFQLQRRWVQLGRDYLFVPSTVFTLLSEL
SHYRSWDRYGGEPYPSRRQEAGRKIRELRRVFRPRASGKI

Sequences:

>Translated_360_residues
MKARSSGNLLALASCLNGRPPTGVDWEQVIALANESLTVASLAVAARKYADDIPEDVRQYLSLIYDRNAQRNRRLLAQLT
EAASCLNRIGVEPVLMKGAAILISQKMDEIGARMLTDLDILVRPADMVSSIGALKDIGYEVRLAGGNGSWPGNRKFHLPA
VLERPTDAGSIDLQCRPKGPASFSDMEWLDGHSRKVDLDGGKFHIPSAFAQIVFLILHDQFQDGDYWRGLIDLRHLLDLS
KLAASEDVDWKQLMSLFARGYERNAVETQILTADKLFGINGAPDLSAGKLPRFQLQRRWVQLGRDYLFVPSTVFTLLSEL
SHYRSWDRYGGEPYPSRRQEAGRKIRELRRVFRPRASGKI
>Mature_360_residues
MKARSSGNLLALASCLNGRPPTGVDWEQVIALANESLTVASLAVAARKYADDIPEDVRQYLSLIYDRNAQRNRRLLAQLT
EAASCLNRIGVEPVLMKGAAILISQKMDEIGARMLTDLDILVRPADMVSSIGALKDIGYEVRLAGGNGSWPGNRKFHLPA
VLERPTDAGSIDLQCRPKGPASFSDMEWLDGHSRKVDLDGGKFHIPSAFAQIVFLILHDQFQDGDYWRGLIDLRHLLDLS
KLAASEDVDWKQLMSLFARGYERNAVETQILTADKLFGINGAPDLSAGKLPRFQLQRRWVQLGRDYLFVPSTVFTLLSEL
SHYRSWDRYGGEPYPSRRQEAGRKIRELRRVFRPRASGKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40318; Mature: 40318

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARSSGNLLALASCLNGRPPTGVDWEQVIALANESLTVASLAVAARKYADDIPEDVRQY
CCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
LSLIYDRNAQRNRRLLAQLTEAASCLNRIGVEPVLMKGAAILISQKMDEIGARMLTDLDI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LVRPADMVSSIGALKDIGYEVRLAGGNGSWPGNRKFHLPAVLERPTDAGSIDLQCRPKGP
HCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCCCEEEEECCCCC
ASFSDMEWLDGHSRKVDLDGGKFHIPSAFAQIVFLILHDQFQDGDYWRGLIDLRHLLDLS
CCCCCCHHHCCCCEEEECCCCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KLAASEDVDWKQLMSLFARGYERNAVETQILTADKLFGINGAPDLSAGKLPRFQLQRRWV
HHHCCCCCCHHHHHHHHHCCCCCCCHHHHEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHH
QLGRDYLFVPSTVFTLLSELSHYRSWDRYGGEPYPSRRQEAGRKIRELRRVFRPRASGKI
HHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKARSSGNLLALASCLNGRPPTGVDWEQVIALANESLTVASLAVAARKYADDIPEDVRQY
CCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
LSLIYDRNAQRNRRLLAQLTEAASCLNRIGVEPVLMKGAAILISQKMDEIGARMLTDLDI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LVRPADMVSSIGALKDIGYEVRLAGGNGSWPGNRKFHLPAVLERPTDAGSIDLQCRPKGP
HCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCCCEEEEECCCCC
ASFSDMEWLDGHSRKVDLDGGKFHIPSAFAQIVFLILHDQFQDGDYWRGLIDLRHLLDLS
CCCCCCHHHCCCCEEEECCCCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KLAASEDVDWKQLMSLFARGYERNAVETQILTADKLFGINGAPDLSAGKLPRFQLQRRWV
HHHCCCCCCHHHHHHHHHCCCCCCCHHHHEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHH
QLGRDYLFVPSTVFTLLSELSHYRSWDRYGGEPYPSRRQEAGRKIRELRRVFRPRASGKI
HHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA