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The map label for this gene is yrkJ [H]

Identifier: 150395375

GI number: 150395375

Start: 166098

End: 167024

Strand: Direct

Name: yrkJ [H]

Synonym: Smed_0148

Alternate gene names: 150395375

Gene position: 166098-167024 (Clockwise)

Preceding gene: 150395374

Following gene: 150395376

Centisome position: 4.39

GC content: 60.95

Gene sequence:

>927_bases
GTGACGGTCTATCTGCCCATAGCTGAGTTGTCGGTGAACATTTTCATCATTCTCGGCATGGGCGCGGCCGTCGGCTTTCT
GTCCGGCATGTTCGGCGTCGGCGGTGGATTCCTGATCACGCCACTCCTGATCTTCTACAATATTCCGCCCGTCGTGGCGG
TGGCGACCGGTGCCAATCAGGTGGTCGCCTCGTCGATCTCAGGGGCGATCGCCCACTTCCGCCGCGGCACCATCGATATC
AAGCTCGGTACGGTGCTTTTGTGCGGCGGCCTTGTGGGTGCGACCGTTGGCGTCTGGCTGTTCTCGCTGCTCAGGAGCGC
CGGCCAGCTCGATCTGGTGATTTCGCTGCTCTACGTCCTGCTTCTCGGTTCGGTCGGCACGCTGATGCTTTGGGAAAGTA
TCGGCGCCATGCGCAAGGCGGCGAAAAACCAGGCGCCGCAGCTCAGGCGGCCCGGCCAGCACAATTGGATTCACGGCTTG
CCGTTGAAGATGCGCTTCAAGAAGTCGAAGATCTATCTGAGTGTCATCCCGGTGGCGACGCTCGGCTTTTCGATTGGCGT
GCTGACCTCCGTGATGGGTGTCGGCGGCGGCTTCATCATGGTGCCTGCCATGATCTACCTTTTGCGTATTCCGACCAACG
TCGTCGTCGGTACCTCGCTGTTTCAGATCGTCTTCGTTTCCGCCTATACGGTGATCGTCCAGGCTTCGACCAACTACACC
GTCGACATCGTCCTCGCCTTCGTGCTGATGATCGCGGGCGTCATCGGCGCGCAATATGGCGTGCGGGTCGGACAAAGGTT
GCGCGGCGAGCAGCTCAGGGCCTTGCTGGCTCTGCTCGTCCTCGCCGTCGGCATCCGTCTGGCGATCGAACTCGTCATCC
CGCCGAAGAACATCTACTCGGTCGTATCCGCGGGAGCAGGCTTCTGA

Upstream 100 bases:

>100_bases
ATGTGAAACATTGCACAATTTCTCAATTGTTTACGATTAGGAATTGTGAAGGAGCAATTTCCGCCCGCCCCGCGGGCCGC
TGGCATATCGAGGTTCGGCC

Downstream 100 bases:

>100_bases
TGCGCTGGCTCCTCCCCCTCTCTCTCGTTGCGCTTGTGCTGGCCGTCACCACACCGGCGTTGGCGCAGGTTCTGGAGCGC
AAGGTCACCGACTTCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSISGAIAHFRRGTIDI
KLGTVLLCGGLVGATVGVWLFSLLRSAGQLDLVISLLYVLLLGSVGTLMLWESIGAMRKAAKNQAPQLRRPGQHNWIHGL
PLKMRFKKSKIYLSVIPVATLGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIVFVSAYTVIVQASTNYT
VDIVLAFVLMIAGVIGAQYGVRVGQRLRGEQLRALLALLVLAVGIRLAIELVIPPKNIYSVVSAGAGF

Sequences:

>Translated_308_residues
MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSISGAIAHFRRGTIDI
KLGTVLLCGGLVGATVGVWLFSLLRSAGQLDLVISLLYVLLLGSVGTLMLWESIGAMRKAAKNQAPQLRRPGQHNWIHGL
PLKMRFKKSKIYLSVIPVATLGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIVFVSAYTVIVQASTNYT
VDIVLAFVLMIAGVIGAQYGVRVGQRLRGEQLRALLALLVLAVGIRLAIELVIPPKNIYSVVSAGAGF
>Mature_307_residues
TVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSISGAIAHFRRGTIDIK
LGTVLLCGGLVGATVGVWLFSLLRSAGQLDLVISLLYVLLLGSVGTLMLWESIGAMRKAAKNQAPQLRRPGQHNWIHGLP
LKMRFKKSKIYLSVIPVATLGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIVFVSAYTVIVQASTNYTV
DIVLAFVLMIAGVIGAQYGVRVGQRLRGEQLRALLALLVLAVGIRLAIELVIPPKNIYSVVSAGAGF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 32494; Mature: 32363

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQ
CEEEEEHHHHCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCHH
VVASSISGAIAHFRRGTIDIKLGTVLLCGGLVGATVGVWLFSLLRSAGQLDLVISLLYVL
HHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLGSVGTLMLWESIGAMRKAAKNQAPQLRRPGQHNWIHGLPLKMRFKKSKIYLSVIPVAT
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEHHHH
LGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIVFVSAYTVIVQASTNYT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCH
VDIVLAFVLMIAGVIGAQYGVRVGQRLRGEQLRALLALLVLAVGIRLAIELVIPPKNIYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHH
VVSAGAGF
HHHCCCCC
>Mature Secondary Structure 
TVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQ
EEEEEHHHHCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCHH
VVASSISGAIAHFRRGTIDIKLGTVLLCGGLVGATVGVWLFSLLRSAGQLDLVISLLYVL
HHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLGSVGTLMLWESIGAMRKAAKNQAPQLRRPGQHNWIHGLPLKMRFKKSKIYLSVIPVAT
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEHHHH
LGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIVFVSAYTVIVQASTNYT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCH
VDIVLAFVLMIAGVIGAQYGVRVGQRLRGEQLRALLALLVLAVGIRLAIELVIPPKNIYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHH
VVSAGAGF
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]