| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395300
Identifier: 150395300
GI number: 150395300
Start: 80028
End: 80942
Strand: Direct
Name: 150395300
Synonym: Smed_0072
Alternate gene names: NA
Gene position: 80028-80942 (Clockwise)
Preceding gene: 150395298
Following gene: 150395301
Centisome position: 2.12
GC content: 60.77
Gene sequence:
>915_bases ATGGAAACCTGGGTTCTCATCACCGTCGCAGCGGCCTTCCTTCAAAATGTCCGCTCCTCCATGCAGAAGCACTTGAAAGG GGTCATGGGCACCACCGGCGCGACATTCGTCCGCTTTGGTTTCGGCCTACCTTTCGCACTTCTTTACCTCGTTCTGCTCT GGCGTGTCGGGGGGCACCAGCTGCCCGTGCCGAACGGCACATTCTATCTCTGGGCGGTGGTCGGAGGTTTGGCGCAGATC GCGGCGACTTTCCTGCTCCTGCATCTCTTCTCCTTCCGCAACTTCGCGGTCGGGACCGCCTATTCCCGGACCGAACCCGC CCAGGCGGCGCTCTTCGGGTTGATTTTCCTCGGTGAAAAGGCGAGCCAGGGAGCGCTGATTGCGATCGCCATTTCAGTCG TCGGCGTTATGCTGATCTCCGTCGCGCGGACGACGCTCAGCGCGCGCTCCCTGGTGACCTCCGTTCTCAGCCCTACGGCC GGGATCGGCTTGCTCTCCGGTACTTTCTTCGGGCTCTCAGCCGTTTCCTATCGTTCGGCCTCGCTTGCACTGGAGCCAAG TCTGCCTCAGCCGGACTATCTGATCCAGGCGAGCTTCACGCTCGGCTTCGTCATCCTGCTGCAGACGATCATCATGCTCA TCTGGATCGTCGCGCGCGAACGCGACGAACTGAAACGCATAGGCGCCGCCTGGAAGCCGGCTTTCGTCGTAGGCTTCGTC GGCGCGTCCGCTTCCTTCGGCTGGTTCGCAGCGATGACTTTGCAGCAGGCGGCGATCGTAAAGGTGGTTGCACAGGTGGA GATGATCTTCACCTTCGCCTCGTCTTTCTTCATCTTCCGGGAATGGATCAACCGGCTCGAACTCTTCGGCTGCCTGCTGA TCGTGCTCGGCGTGGTCATGCTGCTCGTGATATGA
Upstream 100 bases:
>100_bases TCGCTCGAACGCTGAAAAAATCAACTAACCTCTTGAACTGTAAGCGCTTCCGGACGGAAGGTCGTTACACGTTTTCCTGG GAGTACTTTAGCAGGTAAAT
Downstream 100 bases:
>100_bases ATCACCGGCGCGGTTGCACGAAATAGATGCCCGAATTTCGGCGGACGTCGCGCCTGACGGATGCTACAAAGCAATATGCT TTTCGATCTTCCGAATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQLPVPNGTFYLWAVVGGLAQI AATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEKASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTA GIGLLSGTFFGLSAVSYRSASLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVMLLVI
Sequences:
>Translated_304_residues METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQLPVPNGTFYLWAVVGGLAQI AATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEKASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTA GIGLLSGTFFGLSAVSYRSASLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVMLLVI >Mature_304_residues METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQLPVPNGTFYLWAVVGGLAQI AATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEKASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTA GIGLLSGTFFGLSAVSYRSASLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVMLLVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32866; Mature: 32866
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCC LPVPNGTFYLWAVVGGLAQIAATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC ASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTAGIGLLSGTFFGLSAVSYRSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC SLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV CEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHEEEC GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVI HHHC >Mature Secondary Structure METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCC LPVPNGTFYLWAVVGGLAQIAATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC ASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTAGIGLLSGTFFGLSAVSYRSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC SLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV CEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHEEEC GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVI HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA