Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395300

Identifier: 150395300

GI number: 150395300

Start: 80028

End: 80942

Strand: Direct

Name: 150395300

Synonym: Smed_0072

Alternate gene names: NA

Gene position: 80028-80942 (Clockwise)

Preceding gene: 150395298

Following gene: 150395301

Centisome position: 2.12

GC content: 60.77

Gene sequence:

>915_bases
ATGGAAACCTGGGTTCTCATCACCGTCGCAGCGGCCTTCCTTCAAAATGTCCGCTCCTCCATGCAGAAGCACTTGAAAGG
GGTCATGGGCACCACCGGCGCGACATTCGTCCGCTTTGGTTTCGGCCTACCTTTCGCACTTCTTTACCTCGTTCTGCTCT
GGCGTGTCGGGGGGCACCAGCTGCCCGTGCCGAACGGCACATTCTATCTCTGGGCGGTGGTCGGAGGTTTGGCGCAGATC
GCGGCGACTTTCCTGCTCCTGCATCTCTTCTCCTTCCGCAACTTCGCGGTCGGGACCGCCTATTCCCGGACCGAACCCGC
CCAGGCGGCGCTCTTCGGGTTGATTTTCCTCGGTGAAAAGGCGAGCCAGGGAGCGCTGATTGCGATCGCCATTTCAGTCG
TCGGCGTTATGCTGATCTCCGTCGCGCGGACGACGCTCAGCGCGCGCTCCCTGGTGACCTCCGTTCTCAGCCCTACGGCC
GGGATCGGCTTGCTCTCCGGTACTTTCTTCGGGCTCTCAGCCGTTTCCTATCGTTCGGCCTCGCTTGCACTGGAGCCAAG
TCTGCCTCAGCCGGACTATCTGATCCAGGCGAGCTTCACGCTCGGCTTCGTCATCCTGCTGCAGACGATCATCATGCTCA
TCTGGATCGTCGCGCGCGAACGCGACGAACTGAAACGCATAGGCGCCGCCTGGAAGCCGGCTTTCGTCGTAGGCTTCGTC
GGCGCGTCCGCTTCCTTCGGCTGGTTCGCAGCGATGACTTTGCAGCAGGCGGCGATCGTAAAGGTGGTTGCACAGGTGGA
GATGATCTTCACCTTCGCCTCGTCTTTCTTCATCTTCCGGGAATGGATCAACCGGCTCGAACTCTTCGGCTGCCTGCTGA
TCGTGCTCGGCGTGGTCATGCTGCTCGTGATATGA

Upstream 100 bases:

>100_bases
TCGCTCGAACGCTGAAAAAATCAACTAACCTCTTGAACTGTAAGCGCTTCCGGACGGAAGGTCGTTACACGTTTTCCTGG
GAGTACTTTAGCAGGTAAAT

Downstream 100 bases:

>100_bases
ATCACCGGCGCGGTTGCACGAAATAGATGCCCGAATTTCGGCGGACGTCGCGCCTGACGGATGCTACAAAGCAATATGCT
TTTCGATCTTCCGAATGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQLPVPNGTFYLWAVVGGLAQI
AATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEKASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTA
GIGLLSGTFFGLSAVSYRSASLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV
GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVMLLVI

Sequences:

>Translated_304_residues
METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQLPVPNGTFYLWAVVGGLAQI
AATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEKASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTA
GIGLLSGTFFGLSAVSYRSASLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV
GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVMLLVI
>Mature_304_residues
METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQLPVPNGTFYLWAVVGGLAQI
AATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEKASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTA
GIGLLSGTFFGLSAVSYRSASLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV
GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVMLLVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32866; Mature: 32866

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCC
LPVPNGTFYLWAVVGGLAQIAATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
ASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTAGIGLLSGTFFGLSAVSYRSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
SLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV
CEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHEEEC
GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVI
HHHC
>Mature Secondary Structure
METWVLITVAAAFLQNVRSSMQKHLKGVMGTTGATFVRFGFGLPFALLYLVLLWRVGGHQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCC
LPVPNGTFYLWAVVGGLAQIAATFLLLHLFSFRNFAVGTAYSRTEPAQAALFGLIFLGEK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
ASQGALIAIAISVVGVMLISVARTTLSARSLVTSVLSPTAGIGLLSGTFFGLSAVSYRSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
SLALEPSLPQPDYLIQASFTLGFVILLQTIIMLIWIVARERDELKRIGAAWKPAFVVGFV
CEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHEEEC
GASASFGWFAAMTLQQAAIVKVVAQVEMIFTFASSFFIFREWINRLELFGCLLIVLGVVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVI
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA