Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395263

Identifier: 150395263

GI number: 150395263

Start: 37329

End: 37820

Strand: Direct

Name: 150395263

Synonym: Smed_0035

Alternate gene names: NA

Gene position: 37329-37820 (Clockwise)

Preceding gene: 150395262

Following gene: 150395264

Centisome position: 0.99

GC content: 61.99

Gene sequence:

>492_bases
ATGGTTTCAACGCGACTCTCACGACTGGAAGGTCATCGCCGCAAGTTCATGGCGGTGATCGACGATACGCCCGAATGCGA
ACGCGCCGTGCATTATGCCGGCATGCGGGCCAAGAACTCCAATGGCGGCCTCGTGCTGCTCTACGTAATTGCCGACGGCG
ACTTCCAGCAATGGCTGGGGGTCGAGGAGATCATGCGGGCCGAAGCGCGCCAGGAAGCCGAATCGACCCTGGCCAAAATC
GCGCAGACGGTGCGCGAACGGATCGGCATCGAACCGGAGATCGTCATTCGCGAGGGCATCGCCACCGAGCAGATTCACGC
CGCCATCGAGGAGGACCGGGACATCGCCATTCTGGTGCTTGCGGCGGGATCAGCCAAGGAGGGACCGGGCCCCCTCGTTT
CGTCCATCGCGGGAAAAGCTGCTGCCTTCCCGATCCCCGTCACCGTCATTCCCGACCTTTTGACGGATGAGGAAATTGAC
GCACTGACCTGA

Upstream 100 bases:

>100_bases
GAAAAAACAATGCGGGAGGTCCGCGAGATCATCGGCTTTTTGCAGTAGTTGGTGAAAATGAGACCTTGCGGGCGCCGCGC
GGCGTTGTAATGTTCGGCGC

Downstream 100 bases:

>100_bases
CCTCCTGCCGGCGTTCCGGTCCGCCGCGCATGGTGCGCGGCAGCACTTTACTTGCCGCATGTTTTGCCCATCGATGGAAA
ACGATAAAAGGAAACATACA

Product: UspA domain-containing protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein; Uspa Domain-Containing Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MVSTRLSRLEGHRRKFMAVIDDTPECERAVHYAGMRAKNSNGGLVLLYVIADGDFQQWLGVEEIMRAEARQEAESTLAKI
AQTVRERIGIEPEIVIREGIATEQIHAAIEEDRDIAILVLAAGSAKEGPGPLVSSIAGKAAAFPIPVTVIPDLLTDEEID
ALT

Sequences:

>Translated_163_residues
MVSTRLSRLEGHRRKFMAVIDDTPECERAVHYAGMRAKNSNGGLVLLYVIADGDFQQWLGVEEIMRAEARQEAESTLAKI
AQTVRERIGIEPEIVIREGIATEQIHAAIEEDRDIAILVLAAGSAKEGPGPLVSSIAGKAAAFPIPVTVIPDLLTDEEID
ALT
>Mature_163_residues
MVSTRLSRLEGHRRKFMAVIDDTPECERAVHYAGMRAKNSNGGLVLLYVIADGDFQQWLGVEEIMRAEARQEAESTLAKI
AQTVRERIGIEPEIVIREGIATEQIHAAIEEDRDIAILVLAAGSAKEGPGPLVSSIAGKAAAFPIPVTVIPDLLTDEEID
ALT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17686; Mature: 17686

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTRLSRLEGHRRKFMAVIDDTPECERAVHYAGMRAKNSNGGLVLLYVIADGDFQQWLG
CCCCHHHHHHHHHHHEEHEECCCCHHHHHHHHHCCCEECCCCCEEEEEEEECCCHHHHCC
VEEIMRAEARQEAESTLAKIAQTVRERIGIEPEIVIREGIATEQIHAAIEEDRDIAILVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEE
AAGSAKEGPGPLVSSIAGKAAAFPIPVTVIPDLLTDEEIDALT
ECCCCCCCCCHHHHHHCCCCCCCCCCHHHHCHHHCCCCCCCCC
>Mature Secondary Structure
MVSTRLSRLEGHRRKFMAVIDDTPECERAVHYAGMRAKNSNGGLVLLYVIADGDFQQWLG
CCCCHHHHHHHHHHHEEHEECCCCHHHHHHHHHCCCEECCCCCEEEEEEEECCCHHHHCC
VEEIMRAEARQEAESTLAKIAQTVRERIGIEPEIVIREGIATEQIHAAIEEDRDIAILVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEE
AAGSAKEGPGPLVSSIAGKAAAFPIPVTVIPDLLTDEEIDALT
ECCCCCCCCCHHHHHHCCCCCCCCCCHHHHCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA