| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395261
Identifier: 150395261
GI number: 150395261
Start: 35732
End: 36121
Strand: Direct
Name: 150395261
Synonym: Smed_0033
Alternate gene names: NA
Gene position: 35732-36121 (Clockwise)
Preceding gene: 150395260
Following gene: 150395262
Centisome position: 0.94
GC content: 63.59
Gene sequence:
>390_bases ATGAAACAGACGATCGCCCGCGTGGCCCTGGTCGTGCCCGACTATGACGAGGCCATCGCCTTTTACTGCGAAAGGCTTGG TTTCGATCTCCTCGAGGACGCGGATGCCGGCGGCGGCAAGCGCTGGGTGGTCGTGCGGCCGAAGGGCGCGGCCGAGACCG CTCTCCTGCTCGCCAGGGCCGAGGGCGAAAGGCAATGCGCCGCAATCGGCAATCAGACCGCCGGCCGGGTCGGCTTCTTC CTTTTTACCGACGATTTTGCGCGCGATCACGCTGCAATGCTTTCCGCCGGCGTCGAATTCCTCGAAGTGCCTCGATACGA GGCATACGGAATTGTCGCAGTGTTCACCGATCCGTTCGGCAATCGCTGGGATCTCCTGCAGCCGGCGTGA
Upstream 100 bases:
>100_bases TCGGGATCGGCGGCGCGAGCCTCTCGATGGTGCGCCGGAGCGTCAAACGGGGTGCATCGGCCTCGTCCGCCGAGCCGGCG GGCAAAGCGGGCGATGAACA
Downstream 100 bases:
>100_bases CCCGCCTCTTGATTGCGCCCGTGCTGCCGTGCATAAGCGCGGCGGATATCAACTGGAGACGGGCCCTCCACAAGCCCGAT TGAGGACGACATGACCGAAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKQTIARVALVVPDYDEAIAFYCERLGFDLLEDADAGGGKRWVVVRPKGAAETALLLARAEGERQCAAIGNQTAGRVGFF LFTDDFARDHAAMLSAGVEFLEVPRYEAYGIVAVFTDPFGNRWDLLQPA
Sequences:
>Translated_129_residues MKQTIARVALVVPDYDEAIAFYCERLGFDLLEDADAGGGKRWVVVRPKGAAETALLLARAEGERQCAAIGNQTAGRVGFF LFTDDFARDHAAMLSAGVEFLEVPRYEAYGIVAVFTDPFGNRWDLLQPA >Mature_129_residues MKQTIARVALVVPDYDEAIAFYCERLGFDLLEDADAGGGKRWVVVRPKGAAETALLLARAEGERQCAAIGNQTAGRVGFF LFTDDFARDHAAMLSAGVEFLEVPRYEAYGIVAVFTDPFGNRWDLLQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywkD [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14130; Mature: 14130
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTIARVALVVPDYDEAIAFYCERLGFDLLEDADAGGGKRWVVVRPKGAAETALLLARA CCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEC EGERQCAAIGNQTAGRVGFFLFTDDFARDHAAMLSAGVEFLEVPRYEAYGIVAVFTDPFG CCCCHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCC NRWDLLQPA CCCCCCCCC >Mature Secondary Structure MKQTIARVALVVPDYDEAIAFYCERLGFDLLEDADAGGGKRWVVVRPKGAAETALLLARA CCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEC EGERQCAAIGNQTAGRVGFFLFTDDFARDHAAMLSAGVEFLEVPRYEAYGIVAVFTDPFG CCCCHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCC NRWDLLQPA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]