Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395234

Identifier: 150395234

GI number: 150395234

Start: 5532

End: 6398

Strand: Direct

Name: 150395234

Synonym: Smed_0006

Alternate gene names: NA

Gene position: 5532-6398 (Clockwise)

Preceding gene: 150395233

Following gene: 150395239

Centisome position: 0.15

GC content: 63.55

Gene sequence:

>867_bases
ATGACTGTCACCGAACACAGGACTGCGGCCGTAGCGGAGATCAGGAGTGTCATCGGGGACTGGGCCGAGGCGCTGCGCCG
GAAGGATGCCGCCCGCGTTCTCGCAAACGGCACACAGGATTGCGTCGTCTTCTCGCTGGCACCGCCCCTGAAGGCTTCGG
ATGCAGACGCGGGAGGTCTTGATGCGTGGTTTTCCACGTGGAAAGGGCAGCTCGGTTTCATCCTCGAAGACCTCGACATT
GCGGTGAGCGGCGACGTCGCCTTCGCCACGGCACTCACGCATCTCTCGGGCGAGAAGCAGGACGGCGAGAAGGCGGCGCT
GTGGTATCGTCTGACCCTGGGCCTCAGGCGCACCGACGGGGGCTGGAAGATCGCGCATCAGCACGAATCCGTTCCCTTCT
ATATGGATGGGAGTTTCAAGGCGGCAATCGATCTCGATCCCCGGTCCGAGGTCGACTGGCAAGCGCCGTCGCGCCCCCCG
ATGCCCGGGGTCATCGCTTATCTCAACCTGGAGGACGCGGATGCGGCGGCCTCCTTTTACGGCCGGGCTTTCGGCGCAAA
AGAGGAGGATCGAAAATATGCGCAGGACGGCAGCCGTCTCATCCATTGCCATCTGACGATCAATGGCGGCGCATTGATGC
TGAACGATCCCTTCCCCGAATTCGGCCATCCCTGGAAACCGCCGGAAGGTTTCGTGCTGCATCTCGTCGTCGACGACGCG
GATGTCTGGTGGAAACGCGCGGTGGCGGCCGGCGCCGAGGTGACGATGCCGCTGGAGATCGCGTTCTGGGGCGACTATTA
CGGCCAGCTGCGGGATCCTTTCGGGGTAACCTGGGGGATCGTCGCCCCGGTAACGGGAGGCGATTGA

Upstream 100 bases:

>100_bases
CGCATGAGAAAATGGGTTTCCACGAGGGCTGGGGCCAATGCGCCGATCAGCTCGCCGCTCTCGTCGCAAAACTCTAGAAC
TCTAAGAGGAGGATCTGGCC

Downstream 100 bases:

>100_bases
CGGGGGAGGGCGGGCACCTCATCCCGCTGCCGCGATCTTCAGCAGGCGAGGTCGGCTACCACGGCATCCAAAATGAGCAT
GCCGGAGGGCGTGCAGCGCA

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGLDAWFSTWKGQLGFILEDLDI
AVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDGGWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPP
MPGVIAYLNLEDADAAASFYGRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA
DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD

Sequences:

>Translated_288_residues
MTVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGLDAWFSTWKGQLGFILEDLDI
AVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDGGWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPP
MPGVIAYLNLEDADAAASFYGRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA
DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD
>Mature_287_residues
TVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGLDAWFSTWKGQLGFILEDLDIA
VSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDGGWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPPM
PGVIAYLNLEDADAAASFYGRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDAD
VWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD

Specific function: Unknown

COG id: COG4319

COG function: function code S; Ketosteroid isomerase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 31456; Mature: 31324

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCH
DAWFSTWKGQLGFILEDLDIAVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDG
HHHHHHCCCCCCEEEEECEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCC
GWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPPMPGVIAYLNLEDADAAASFY
CEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
GRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA
HHHCCCCHHHHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEECCC
DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD
HHHHHHHHHCCCEEEEEEEEEEECCHHHCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
TVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCH
DAWFSTWKGQLGFILEDLDIAVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDG
HHHHHHCCCCCCEEEEECEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCC
GWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPPMPGVIAYLNLEDADAAASFY
CEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
GRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA
HHHCCCCHHHHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEECCC
DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD
HHHHHHHHHCCCEEEEEEEEEEECCHHHCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]