| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395234
Identifier: 150395234
GI number: 150395234
Start: 5532
End: 6398
Strand: Direct
Name: 150395234
Synonym: Smed_0006
Alternate gene names: NA
Gene position: 5532-6398 (Clockwise)
Preceding gene: 150395233
Following gene: 150395239
Centisome position: 0.15
GC content: 63.55
Gene sequence:
>867_bases ATGACTGTCACCGAACACAGGACTGCGGCCGTAGCGGAGATCAGGAGTGTCATCGGGGACTGGGCCGAGGCGCTGCGCCG GAAGGATGCCGCCCGCGTTCTCGCAAACGGCACACAGGATTGCGTCGTCTTCTCGCTGGCACCGCCCCTGAAGGCTTCGG ATGCAGACGCGGGAGGTCTTGATGCGTGGTTTTCCACGTGGAAAGGGCAGCTCGGTTTCATCCTCGAAGACCTCGACATT GCGGTGAGCGGCGACGTCGCCTTCGCCACGGCACTCACGCATCTCTCGGGCGAGAAGCAGGACGGCGAGAAGGCGGCGCT GTGGTATCGTCTGACCCTGGGCCTCAGGCGCACCGACGGGGGCTGGAAGATCGCGCATCAGCACGAATCCGTTCCCTTCT ATATGGATGGGAGTTTCAAGGCGGCAATCGATCTCGATCCCCGGTCCGAGGTCGACTGGCAAGCGCCGTCGCGCCCCCCG ATGCCCGGGGTCATCGCTTATCTCAACCTGGAGGACGCGGATGCGGCGGCCTCCTTTTACGGCCGGGCTTTCGGCGCAAA AGAGGAGGATCGAAAATATGCGCAGGACGGCAGCCGTCTCATCCATTGCCATCTGACGATCAATGGCGGCGCATTGATGC TGAACGATCCCTTCCCCGAATTCGGCCATCCCTGGAAACCGCCGGAAGGTTTCGTGCTGCATCTCGTCGTCGACGACGCG GATGTCTGGTGGAAACGCGCGGTGGCGGCCGGCGCCGAGGTGACGATGCCGCTGGAGATCGCGTTCTGGGGCGACTATTA CGGCCAGCTGCGGGATCCTTTCGGGGTAACCTGGGGGATCGTCGCCCCGGTAACGGGAGGCGATTGA
Upstream 100 bases:
>100_bases CGCATGAGAAAATGGGTTTCCACGAGGGCTGGGGCCAATGCGCCGATCAGCTCGCCGCTCTCGTCGCAAAACTCTAGAAC TCTAAGAGGAGGATCTGGCC
Downstream 100 bases:
>100_bases CGGGGGAGGGCGGGCACCTCATCCCGCTGCCGCGATCTTCAGCAGGCGAGGTCGGCTACCACGGCATCCAAAATGAGCAT GCCGGAGGGCGTGCAGCGCA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGLDAWFSTWKGQLGFILEDLDI AVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDGGWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPP MPGVIAYLNLEDADAAASFYGRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD
Sequences:
>Translated_288_residues MTVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGLDAWFSTWKGQLGFILEDLDI AVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDGGWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPP MPGVIAYLNLEDADAAASFYGRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD >Mature_287_residues TVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGLDAWFSTWKGQLGFILEDLDIA VSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDGGWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPPM PGVIAYLNLEDADAAASFYGRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDAD VWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD
Specific function: Unknown
COG id: COG4319
COG function: function code S; Ketosteroid isomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 31456; Mature: 31324
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCH DAWFSTWKGQLGFILEDLDIAVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDG HHHHHHCCCCCCEEEEECEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCC GWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPPMPGVIAYLNLEDADAAASFY CEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH GRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA HHHCCCCHHHHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEECCC DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD HHHHHHHHHCCCEEEEEEEEEEECCHHHCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure TVTEHRTAAVAEIRSVIGDWAEALRRKDAARVLANGTQDCVVFSLAPPLKASDADAGGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCH DAWFSTWKGQLGFILEDLDIAVSGDVAFATALTHLSGEKQDGEKAALWYRLTLGLRRTDG HHHHHHCCCCCCEEEEECEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCC GWKIAHQHESVPFYMDGSFKAAIDLDPRSEVDWQAPSRPPMPGVIAYLNLEDADAAASFY CEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH GRAFGAKEEDRKYAQDGSRLIHCHLTINGGALMLNDPFPEFGHPWKPPEGFVLHLVVDDA HHHCCCCHHHHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEECCC DVWWKRAVAAGAEVTMPLEIAFWGDYYGQLRDPFGVTWGIVAPVTGGD HHHHHHHHHCCCEEEEEEEEEEECCHHHCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]