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The map label for this gene is ydiF [H]

Identifier: 150394562

GI number: 150394562

Start: 2196529

End: 2198457

Strand: Direct

Name: ydiF [H]

Synonym: SaurJH1_2121

Alternate gene names: 150394562

Gene position: 2196529-2198457 (Clockwise)

Preceding gene: 150394553

Following gene: 150394563

Centisome position: 75.57

GC content: 32.09

Gene sequence:

>1929_bases
ATGATACTTTTACAACTCAATCATATATCAAAATCGTTCGATGGTGAAGATATATTTACTGATGTTGATTTTGAAGTAAA
AACTGGTGAACGAATTGGTATCGTAGGAAGAAATGGCGCCGGTAAATCAACATTGATGAAAATTATAGCTGGTGTAGAAA
ACTATGATTCTGGAAATGTGTCAAAAATTAAAAACTTAAAACTAGGTTATTTAACTCAACAAATGACTTTAAATTCTAAT
GCAACAGTTTTTGAAGAAATGTCAAAACCATTTGAACATATTAAACGAATGGAAAGCTTAATCAAAGAAGAAACAGATTG
GTTATCAAAACATGCAAATGATTACGATAGTGATACATATAAAACACATATGTCCCGTTATGAATCTTTATCGAATCAAT
TTGAACAATTAGAAGGATATCAATATGAAAGTAAAATTAAAACAGTACTTCACGGGTTAAATTTTAGTGAAGAAGATTTC
AATAAACCTATCAATGATTTTAGCGGCGGCCAAAAAACACGTTTATCTTTAGCTCAAATGCTATTAAACGAACCTGATTT
ATTACTTTTAGATGAACCTACTAACCACTTAGATTTAGAAACGACAAAGTGGCTTGAAGATTATCTACGTTATTTTAAAG
GTGCAATCGTCATCATCAGCCATGATCGTTACTTTTTAGATAAAATAGTTACTCAAATTTATGATGTGGCTTTAGGTGAT
GTCAAACGCTATGTTGGTAATTACGAGGAATTTATACAGCAACGGGATTTATATTATCAAAAACGAATGCAAGAATATGA
AAGTCAACAAGCAGAAATAAAACGATTAGAAACTTTTGTTGAGAAAAATATTACCCGTGCTTCAACAAGTGGAATGGCAA
AAAGTAGACGTAAGATTTTAGAAAAAATGGAACGCATTGATAAACCAATGTTAGATGCCAAAAGTGCAAATATTCAATTT
GGCTTTGACCGGAATACAGGTAATGACGTCATGCATGTAAAAAATTTAGAAATCGGTTATCAAACTGCAATTACCAAACC
TATCAGTATAGAGGTCTCTAAAGGCGATCATATAGCAATCATTGGGCCAAATGGTATTGGAAAATCGACCTTAATTAAAA
CTATTGCTAATCAACAAAAAGCGCTTAATGGCGATATTACTTTCGGCGCAAATTTACAAATTGGTTATTATGATCAAAAG
CAAGCAGAATTTAAATCTAGTAAAACGATTTTAGATTATGTGTGGGATCAATATCCGTTAATGAATGAAAAAGATATTCG
AGCAGTTCTTGGACGTTTCTTATTTGTACAAGACGATGTTAAAAAGATAATTAATGATTTATCTGGTGGTGAAAAAGCAC
GTTTACAACTAGCACTACTTATGTTGCAACGTGACAATGTACTTATTTTAGATGAACCTACCAACCACCTCGATATAGAT
TCAAAAGAAATGTTAGAGCAAGCACTCCAACATTTTGAAGGAACAATACTATTTGTTTCCCATGATCGTTACTTTATTAA
CCAATTAGCAAACAAGGTATTTGATTTAACAATTGATGGCGGAAAGATGTATTTAGGAGATTATCAATATTACATTGAAA
AAGTTGAGGAAGCCGAAGCGTTGAAAGCGCACCAAGAAGAACAGTCAGTTAACGTACAAGCACATAAAAAGTCTATGGAA
CAATCGTCGTATCATAACCAAAAAGAACAAAGACGTGAACAACGCAAACTTGAACGACAAATATCCGAGTGTGAAAATGA
AATAGAAACTTTAGAGACTACTATCTTACAAATAGACGAGCAATTAACCCAACCAGAAGTGTATAACAATCCACAAAAAG
CAAACGAATTAGCTATCCAAAAACAAGATAGCGAACAAAAATTAGAACACGCTATGTCTAAATGGGAAGAATTACAACAA
AAACTATAA

Upstream 100 bases:

>100_bases
TCAAGACGGCGTTTTATACTGTAAAATGGTTATTAATGTAATAATTACGACTTTTTTCATAAGTTAATAAAATTTGAGAA
AGACGAAAGGTGAAGATCGA

Downstream 100 bases:

>100_bases
AAATATACATAACTCTAACTGTAAATTCGCTATAGTTAGAGTTATTTTTTTACAAATTTTAATTTTTTTTATTCACAATA
AAAACGCTGATATTATAGCT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKSTLMKIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSN
ATVFEEMSKPFEHIKRMESLIKEETDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDF
NKPINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVIISHDRYFLDKIVTQIYDVALGD
VKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRLETFVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQF
GFDRNTGNDVMHVKNLEIGYQTAITKPISIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANLQIGYYDQK
QAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDID
SKEMLEQALQHFEGTILFVSHDRYFINQLANKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHKKSME
QSSYHNQKEQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYNNPQKANELAIQKQDSEQKLEHAMSKWEELQQ
KL

Sequences:

>Translated_642_residues
MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKSTLMKIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSN
ATVFEEMSKPFEHIKRMESLIKEETDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDF
NKPINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVIISHDRYFLDKIVTQIYDVALGD
VKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRLETFVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQF
GFDRNTGNDVMHVKNLEIGYQTAITKPISIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANLQIGYYDQK
QAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDID
SKEMLEQALQHFEGTILFVSHDRYFINQLANKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHKKSME
QSSYHNQKEQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYNNPQKANELAIQKQDSEQKLEHAMSKWEELQQ
KL
>Mature_642_residues
MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKSTLMKIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSN
ATVFEEMSKPFEHIKRMESLIKEETDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDF
NKPINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVIISHDRYFLDKIVTQIYDVALGD
VKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRLETFVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQF
GFDRNTGNDVMHVKNLEIGYQTAITKPISIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANLQIGYYDQK
QAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDID
SKEMLEQALQHFEGTILFVSHDRYFINQLANKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHKKSME
QSSYHNQKEQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYNNPQKANELAIQKQDSEQKLEHAMSKWEELQQ
KL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=536, Percent_Identity=30.0373134328358, Blast_Score=243, Evalue=4e-64,
Organism=Homo sapiens, GI27881506, Length=536, Percent_Identity=30.0373134328358, Blast_Score=243, Evalue=4e-64,
Organism=Homo sapiens, GI148612853, Length=523, Percent_Identity=28.2982791586998, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI10947135, Length=554, Percent_Identity=31.2274368231047, Blast_Score=219, Evalue=9e-57,
Organism=Homo sapiens, GI69354671, Length=554, Percent_Identity=31.2274368231047, Blast_Score=218, Evalue=1e-56,
Organism=Escherichia coli, GI1789751, Length=624, Percent_Identity=31.7307692307692, Blast_Score=337, Evalue=1e-93,
Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=33.5205992509363, Blast_Score=312, Evalue=3e-86,
Organism=Escherichia coli, GI2367384, Length=543, Percent_Identity=32.5966850828729, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787182, Length=666, Percent_Identity=30.7807807807808, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=28.2722513089005, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082267, Length=206, Percent_Identity=25.7281553398058, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1788506, Length=238, Percent_Identity=23.109243697479, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI48994883, Length=281, Percent_Identity=23.8434163701068, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=30.6603773584906, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788002, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788761, Length=199, Percent_Identity=27.1356783919598, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=21.1538461538462, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=30.2063789868668, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=29.2307692307692, Blast_Score=228, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17559834, Length=556, Percent_Identity=29.136690647482, Blast_Score=218, Evalue=6e-57,
Organism=Saccharomyces cerevisiae, GI6320874, Length=521, Percent_Identity=30.5182341650672, Blast_Score=247, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=30.5301645338208, Blast_Score=244, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6324314, Length=412, Percent_Identity=27.9126213592233, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=376, Percent_Identity=29.5212765957447, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=413, Percent_Identity=28.3292978208232, Blast_Score=121, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24666836, Length=541, Percent_Identity=29.7597042513863, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI24642252, Length=519, Percent_Identity=31.4065510597302, Blast_Score=247, Evalue=2e-65,
Organism=Drosophila melanogaster, GI18859989, Length=519, Percent_Identity=31.4065510597302, Blast_Score=247, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24641342, Length=558, Percent_Identity=30.4659498207885, Blast_Score=245, Evalue=8e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74418; Mature: 74418

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKSTLMKIIAGVENYDSGNV
CEEEEEEHHCCCCCCCCCEECCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCH
SKIKNLKLGYLTQQMTLNSNATVFEEMSKPFEHIKRMESLIKEETDWLSKHANDYDSDTY
HHHHCCHHHHEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDFNKPINDFSGGQKTRLSLAQM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCHHHHHHHHHH
LLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVIISHDRYFLDKIVTQIYDVALGD
HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH
VKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRLETFVEKNITRASTSGMAKSRRKIL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EKMERIDKPMLDAKSANIQFGFDRNTGNDVMHVKNLEIGYQTAITKPISIEVSKGDHIAI
HHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHCCCCEEEEECCCCEEEE
IGPNGIGKSTLIKTIANQQKALNGDITFGANLQIGYYDQKQAEFKSSKTILDYVWDQYPL
ECCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCHHHHHHHCCHHHHHHHCCCCC
MNEKDIRAVLGRFLFVQDDVKKIINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDID
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
SKEMLEQALQHFEGTILFVSHDRYFINQLANKVFDLTIDGGKMYLGDYQYYIEKVEEAEA
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEEECCCEEEECHHHHHHHHHHHHHH
LKAHQEEQSVNVQAHKKSMEQSSYHNQKEQRREQRKLERQISECENEIETLETTILQIDE
HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLTQPEVYNNPQKANELAIQKQDSEQKLEHAMSKWEELQQKL
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKSTLMKIIAGVENYDSGNV
CEEEEEEHHCCCCCCCCCEECCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCH
SKIKNLKLGYLTQQMTLNSNATVFEEMSKPFEHIKRMESLIKEETDWLSKHANDYDSDTY
HHHHCCHHHHEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDFNKPINDFSGGQKTRLSLAQM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCHHHHHHHHHH
LLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVIISHDRYFLDKIVTQIYDVALGD
HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH
VKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRLETFVEKNITRASTSGMAKSRRKIL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EKMERIDKPMLDAKSANIQFGFDRNTGNDVMHVKNLEIGYQTAITKPISIEVSKGDHIAI
HHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHCCCCEEEEECCCCEEEE
IGPNGIGKSTLIKTIANQQKALNGDITFGANLQIGYYDQKQAEFKSSKTILDYVWDQYPL
ECCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCHHHHHHHCCHHHHHHHCCCCC
MNEKDIRAVLGRFLFVQDDVKKIINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDID
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
SKEMLEQALQHFEGTILFVSHDRYFINQLANKVFDLTIDGGKMYLGDYQYYIEKVEEAEA
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEEECCCEEEECHHHHHHHHHHHHHH
LKAHQEEQSVNVQAHKKSMEQSSYHNQKEQRREQRKLERQISECENEIETLETTILQIDE
HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLTQPEVYNNPQKANELAIQKQDSEQKLEHAMSKWEELQQKL
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]