| Definition | Staphylococcus aureus subsp. aureus JH1, complete genome. |
|---|---|
| Accession | NC_009632 |
| Length | 2,906,507 |
Click here to switch to the map view.
The map label for this gene is 150394533
Identifier: 150394533
GI number: 150394533
Start: 2167132
End: 2167848
Strand: Direct
Name: 150394533
Synonym: SaurJH1_2091
Alternate gene names: NA
Gene position: 2167132-2167848 (Clockwise)
Preceding gene: 150394530
Following gene: 150394534
Centisome position: 74.56
GC content: 31.8
Gene sequence:
>717_bases ATGAACAGTTTTAAGGATAGATTAAAGCAAATTATGTCTGAACGGAAGATATCTCAATCAGAGCTATCAAGAAGGACTGG TATTGGTAGAAACTCAATTAGCGATTATTTAAACGGAAAATATGAAGCGAAACAAGACAAAGTCTTTGAACTAGCAAAGG CTTTAAACGTTAACGAAGCGTGGCTTATGGGGTTTGATATTTCTAAGAATAGAAAAATTGAAAATAACGACATCACTTCC ATATACAGTAAACTCACGCCTCCAAGACAAAGCAATGTACTAAAATATGCGACTAATCAATTAGAAGAACAAAATAATGA CAGTGATAATCTGGTAGATTTCAATTCTTACATTCAAGAAAAATCCGAAGTGGATATATATGGTTGTGCGTCAGCTGGTA TTGGCGAAAGATTATATAACGAGCCTATTTCAAAAGAATTCGTAAGAGGTTATGTCCCCGCACATGATATAGCTTTAAAA GTAAATGGAGACTCAATGGAGCCGTTATTTAAAAACGGACAAATTATATTCATTGAAAAATCTCACACTATCAAAGATGG ACAAATAGGCGTCTTTATTATAAATGGAGATGCTTACGTAAAGAAAGTTTATGTAGAAGATAATAGATTAACGTTGGTTT CTTTAAATAAAAAGTATAAAGATTTATATTTTTATGATAACGAAAGTGTGAGGTTAGTTGGAAAAGTTATTTTATAG
Upstream 100 bases:
>100_bases AGTCAACACATAAAATACATTTTTCTGTACAATATTTGTTAAAAATTATTGATAATCGTCATTGTACGTAGTATTATGTT CTTAGGAGGTGTTCAGAAAT
Downstream 100 bases:
>100_bases GAGGTAGTAAAATGAAACCTAGAAAGCAAGATGAAAAAATATTATCAGATCAATACAGTTACTTTGAACCAATAATCAGC GACAGTTGCGACATAAAATT
Product: peptidase S24 S26A and S26B
Products: NA
Alternate protein names: Transcriptional Regulator; Repressor; Phage Repressor-Like Protein; CI Repressor; Phage Repressor; Prophage; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Repressor; Bifunctional; Repressor-Like Protein; XRE Family Transcriptional Regulator; LexA Repressor; CI-Like Repressor; Transcriptional Regulator Truncated; Prophage Repressor; Cro/CI Family Transcriptional Regulator; SOS-Response Transcriptional Repressor; Peptidase; Transcriptional Regulator Cro/CI Family; Transcription Regulator; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEAWLMGFDISKNRKIENNDITS IYSKLTPPRQSNVLKYATNQLEEQNNDSDNLVDFNSYIQEKSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALK VNGDSMEPLFKNGQIIFIEKSHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKDLYFYDNESVRLVGKVIL
Sequences:
>Translated_238_residues MNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEAWLMGFDISKNRKIENNDITS IYSKLTPPRQSNVLKYATNQLEEQNNDSDNLVDFNSYIQEKSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALK VNGDSMEPLFKNGQIIFIEKSHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKDLYFYDNESVRLVGKVIL >Mature_238_residues MNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEAWLMGFDISKNRKIENNDITS IYSKLTPPRQSNVLKYATNQLEEQNNDSDNLVDFNSYIQEKSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALK VNGDSMEPLFKNGQIIFIEKSHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKDLYFYDNESVRLVGKVIL
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27260; Mature: 27260
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00018 EF_HAND_1 ; PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEA CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE WLMGFDISKNRKIENNDITSIYSKLTPPRQSNVLKYATNQLEEQNNDSDNLVDFNSYIQE EEEEEECCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHCC KSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALKVNGDSMEPLFKNGQIIFIEK CCCEEEEEECCCCHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCEEEEEC SHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKDLYFYDNESVRLVGKVIL CCCCCCCCEEEEEECCCEEEEEEEEECCEEEEEEECCCCCEEEEECCCCEEEEEEECC >Mature Secondary Structure MNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEA CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE WLMGFDISKNRKIENNDITSIYSKLTPPRQSNVLKYATNQLEEQNNDSDNLVDFNSYIQE EEEEEECCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHCC KSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALKVNGDSMEPLFKNGQIIFIEK CCCEEEEEECCCCHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCEEEEEC SHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKDLYFYDNESVRLVGKVIL CCCCCCCCEEEEEECCCEEEEEEEEECCEEEEEEECCCCCEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA