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Identifier: 15004750

GI number: 15004750

Start: 46233

End: 46799

Strand: Direct

Name: Not Available

Synonym: CA_P0046

Alternate gene names: NA

Gene position: 46233-46799 (Clockwise)

Preceding gene: 15004746

Following gene: 15004752

Centisome position: 24.08

GC content: 28.57

Gene sequence:

>567_bases
ATGAAGAATAGAATAGAAGATAGAAGAATAAAGTACACAAAGATGGTTATAAAACAAAGTTTAATTACCCTCTTAAAAAA
TAAACCTATAAACAAGGTGACGGTTACAGAGATATGTAATTTGGCAGATATAAATAGGAGTACCTTTTATACTCATTATT
CCAATCCATACGATTTATTGGATTCAATAGAGGAAGAACTATTTGAGGAAGTAAAATCCTCGCTTAGGGATTCAGAAGGA
GAGACAAAAATTGAAAACACTGTAAATGAAATTTTTAAGGCCATTGCAAAAAATAAGGAACTTTTTAAAATTTTTTTTAG
TTCCCATAGAGATTATGGTTTTTTAATAAAGTTTTTTGGAGCTGTATATAATAATTCTATTGATAATTTTAAATCAGCCT
TTAAGTCTAATAACGATGCACAGTTGGAATATCTGTACAACTATATATTAACTGGTAATGCGTCTATCAGCTATAAATGG
ATTAAAAATGGATTAAAGGAAAGCCCAGAAGAAATGGCTTCCCTTGTCAATAGATTAATAGTACATACCATGTCATTTAT
AAAATAG

Upstream 100 bases:

>100_bases
ATAATTTTTAATAAATCAATATTCAATCACTAATATAGAAAAAAGTGTTGTTTAATCAACAGATTATATACATTTTGTTG
TTTATTTTGGAGGAAATTCA

Downstream 100 bases:

>100_bases
AACTATACTTGGAGTTCTAGATCATCATAGCTGGCATAGGAGTTATTAAAGATAGTTTTTGCAGCAAGTTCTGCTTTTTT
TCTATCGTCTAGAGTTAGAT

Product: TetR family HTH transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Acrr-Type Transcriptional Regulator; Regulatory Protein; Transcription Regulator; Regulatory Protein TetR; TetR Family HTH Transcriptional Regulator

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKNRIEDRRIKYTKMVIKQSLITLLKNKPINKVTVTEICNLADINRSTFYTHYSNPYDLLDSIEEELFEEVKSSLRDSEG
ETKIENTVNEIFKAIAKNKELFKIFFSSHRDYGFLIKFFGAVYNNSIDNFKSAFKSNNDAQLEYLYNYILTGNASISYKW
IKNGLKESPEEMASLVNRLIVHTMSFIK

Sequences:

>Translated_188_residues
MKNRIEDRRIKYTKMVIKQSLITLLKNKPINKVTVTEICNLADINRSTFYTHYSNPYDLLDSIEEELFEEVKSSLRDSEG
ETKIENTVNEIFKAIAKNKELFKIFFSSHRDYGFLIKFFGAVYNNSIDNFKSAFKSNNDAQLEYLYNYILTGNASISYKW
IKNGLKESPEEMASLVNRLIVHTMSFIK
>Mature_188_residues
MKNRIEDRRIKYTKMVIKQSLITLLKNKPINKVTVTEICNLADINRSTFYTHYSNPYDLLDSIEEELFEEVKSSLRDSEG
ETKIENTVNEIFKAIAKNKELFKIFFSSHRDYGFLIKFFGAVYNNSIDNFKSAFKSNNDAQLEYLYNYILTGNASISYKW
IKNGLKESPEEMASLVNRLIVHTMSFIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21985; Mature: 21985

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRIEDRRIKYTKMVIKQSLITLLKNKPINKVTVTEICNLADINRSTFYTHYSNPYDLL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEECCCHHHHH
DSIEEELFEEVKSSLRDSEGETKIENTVNEIFKAIAKNKELFKIFFSSHRDYGFLIKFFG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH
AVYNNSIDNFKSAFKSNNDAQLEYLYNYILTGNASISYKWIKNGLKESPEEMASLVNRLI
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHHHHHHHHHHH
VHTMSFIK
HHHHHHHC
>Mature Secondary Structure
MKNRIEDRRIKYTKMVIKQSLITLLKNKPINKVTVTEICNLADINRSTFYTHYSNPYDLL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEECCCHHHHH
DSIEEELFEEVKSSLRDSEGETKIENTVNEIFKAIAKNKELFKIFFSSHRDYGFLIKFFG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH
AVYNNSIDNFKSAFKSNNDAQLEYLYNYILTGNASISYKWIKNGLKESPEEMASLVNRLI
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHHHHHHHHHHH
VHTMSFIK
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA