| Definition | Clostridium beijerinckii NCIMB 8052 chromosome, complete genome. |
|---|---|
| Accession | NC_009617 |
| Length | 6,000,632 |
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Identifier: 150019451
GI number:
Start: 5374223
End: 5376910
Strand: Direct
Name: Not Available
Synonym: Cbei_4641
Alternate gene names: NA
Gene position: NA
Preceding gene: 150019443
Following gene: 150019471
Centisome position: NA
GC content: NA
Gene sequence:
>2688_bases ATGGCTAAAAAAGATTTAATTTACCAAAAACTTCTCCAGCTTAATTCTCCAGATGGGATAGATACAAAAACACTAGCTCC TCTAGTTAATATGACTAGAGCTAACTTAAGCCATGAACTAAATGAACTTTGCAAAGAAGGTAAATTATATAAATCATCTG GTAGACCAGTATTATTTTTTCTTGCTGAAAATAAGATTCAAAGCAATGAATCTCAGTTAGATTTGTTAGCTAAAAATAAT ATTTCTCTTAAAGATTCTGTAGAACAGGCTAAAGCAGCTATACTATATCCACCTAAGGGTATGAATTGTTTAATATTAGG TGCTACTGGTGTAGGAAAGTCTATGTTCGCATCTCTTATGCACAATTATGCATTGGAAATGAAGGTAAAAACAGAAGATT CTCCTTTTATAGTGTTTAACTGTGCAGATTATACTAATAACCCACAACTATTAACTTCTCAACTTTTTGGTGTAAAAAAA GGTGCGTATACTGGAGCTGAATCTGACAAAGTCGGATTAATAGAACAGGCTGATGGTGGTATTTTATTTTTAGATGAGAT TCACAGATTGCCACCTGAAGGGCAGGAAGCTCTATTCATTTTTTTAGATACAGGTACTTTTAGACGTATTGGGGATTCAG AAACCAGAAAATCAGATGTATTAATAATTTCAGCTACAACAGAAGACCCAAATTCTGCTTTATTAAACACATTTACAAGA AGAATTCCTCTTGTTATTAATATTCCTTCTCTTAAAGAAAGAAACTTAGATGAAAGATTATTTTTAATTAAAAGTTTCTT CAAATATGAAAGTATCCGTTTAAATAAGGAAATTTATGTATCTTTAAACTCTCTTAGAGCATTACTTTCTTACGATTGTC CTAATAATATAGGTCAATTGAAAAGTGACGTTCAGCTACTTTGTGCAAAAGCATACTCTGAATACTTAACTAATATACGA CGTGACGTAAGAATCCATAGTAAAATACTGCCTCCTTATATTAAAGAAGGTCTTTATAAAGAAAAAGAGCATAGAGTTTT ATGGAACAAACTTATGAGTGAAGAAATTGAATATTTTAGATTTAATGGTTCTAATGAAGATACAAACACTATATTTAATA ATGGAGATAATACTATTTACGATTTTATAGAAAGTAAACTTGAAAAGCTTAAGTCTTTAGAAATTTCAGATATTGATATT GAGAACATTCTTGAGAAAGATATAGCCAAACATTTCAATAAAAATAACTCTGAAGTTTCCGAAGAAACAAGCAAACAAAA CTTATTAACCATTATTGATGAAGATACATTAAAATGTATTGATAGTATAGTAAGTCATATAACTCGAAAGCTTCCTGTAA TTTTTGATAGTAATTTATATACGGCTTTTGCTCTGCATATCAACACATTAATTAATAGAATAAATAGTGACAAAATAATA ATAAACACTAATTTAAATAGAATAAAAGATCTTTATCCTTCTGAATTTGCTGTTGCACTAGAGATTAAGGAGATCATAGA AAACACTATTAATAAATCAATTCCAATAGATGAAGCTGGATACTTAACATTATTCTTGATACCAGATAATACTTTTAACG ATAAATCTCAAGATAAAGTGAAAGTTATCCTAATTGCCCATGGTGAATCAACTGCCACTTCAATGGCTGATGTTTCTAAC AGACTACTTGGAGAAAACTATATAATTCCAATAAATGCTCCAATAGATGTTGCTCCATCAAAAGTATTAGAAAGCCTTAA GATTGGTATTCAGGACAATCCAACTTCTGCTGGCTATCTCTTATTAGTAGATATGGGGTCTTTAACAACTTTTGCAGATG TTATAAAAAAGGAATTTCAAGTAGACATTAAAGTGATATCTCTTGTTTCAACTTTACATGTTTTAGAAGCAGCACGAAAA GCACTAATTGGATCATCACTAGATGAAATATATAATGACGTTCTTATGGTAAATTCTTATGTAGAAATACATAAAAATAT AAGTAATCCTTCTAGCGATTCTGATAAAGTTTTAATAGTAACTGCCTGCTTAACTGGTGAGGGAGCTGCCATTGCAATTA AAAACTTCTTACTAAGTAATCTTAGATTAGATAAAGATTATTTTGAAGTCGTTTGTCTAAACTGCTTAGATAAAAAATAC TTCAAGCAAAAAATAATTAATCTTCAAGAAAAAAATGAGGTACTTTTTATAGTTTCATCTTTTCCTGTAGATTCACCTAT AAAACAATATACAATGTACGAAGTATTTAACATGAATGTATTAAAAGAATTACAAAGTATAATTGATTCAAAATTAACTA TGATTAATCTACCTAAAATTATAAAGGAAAATATATATAATATAGATGGTGTTGAACTTTATAAAGATGTAACCCTATTT TTAAATATATTACAAGAGAAACTCTTAATTAAATTATCTGATGAAAATATGGTTGGCGTTATTCTCCATTTATCATTTGT AATAGGACGATTAAGAAATGAAGATAATCCAGCTGTTTATCCTCAAAAAGAGAAATATCTAGAAGAAAATTTAAATCTAT ATAATATAATAAAAGAAAATTTAAACTTTATAACTAGCAAATATAAAGTAGAAATATCAGATGATGAAATATGCTATTTA ATGAATCTTTTATCAAATTCAGCTCCTGAATTACAAAGTAAACTTTAA
Upstream 100 bases:
>100_bases ATAATAGTCCCTTTACCGTAGAATTTTCAGCATAGCGTATGAAAATACTTAATCTATTTATAGTAGCTATAATATTTTTA TTTATATAGGAGGACATATA
Downstream 100 bases:
>100_bases TGCCAATATATCCCTATAAAAGAATAAACACATTCTTTTATAGGGATATTAAAGTTTTACTTAGAATAATCAGAAGAATC TACTATAAACTTATTATGTA
Product: sigma-54 factor interaction domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>895_residues MAKKDLIYQKLLQLNSPDGIDTKTLAPLVNMTRANLSHELNELCKEGKLYKSSGRPVLFFLAENKIQSNESQLDLLAKNN ISLKDSVEQAKAAILYPPKGMNCLILGATGVGKSMFASLMHNYALEMKVKTEDSPFIVFNCADYTNNPQLLTSQLFGVKK GAYTGAESDKVGLIEQADGGILFLDEIHRLPPEGQEALFIFLDTGTFRRIGDSETRKSDVLIISATTEDPNSALLNTFTR RIPLVINIPSLKERNLDERLFLIKSFFKYESIRLNKEIYVSLNSLRALLSYDCPNNIGQLKSDVQLLCAKAYSEYLTNIR RDVRIHSKILPPYIKEGLYKEKEHRVLWNKLMSEEIEYFRFNGSNEDTNTIFNNGDNTIYDFIESKLEKLKSLEISDIDI ENILEKDIAKHFNKNNSEVSEETSKQNLLTIIDEDTLKCIDSIVSHITRKLPVIFDSNLYTAFALHINTLINRINSDKII INTNLNRIKDLYPSEFAVALEIKEIIENTINKSIPIDEAGYLTLFLIPDNTFNDKSQDKVKVILIAHGESTATSMADVSN RLLGENYIIPINAPIDVAPSKVLESLKIGIQDNPTSAGYLLLVDMGSLTTFADVIKKEFQVDIKVISLVSTLHVLEAARK ALIGSSLDEIYNDVLMVNSYVEIHKNISNPSSDSDKVLIVTACLTGEGAAIAIKNFLLSNLRLDKDYFEVVCLNCLDKKY FKQKIINLQEKNEVLFIVSSFPVDSPIKQYTMYEVFNMNVLKELQSIIDSKLTMINLPKIIKENIYNIDGVELYKDVTLF LNILQEKLLIKLSDENMVGVILHLSFVIGRLRNEDNPAVYPQKEKYLEENLNLYNIIKENLNFITSKYKVEISDDEICYL MNLLSNSAPELQSKL
Sequences:
NA
Specific function: NA
COG id: COG1221
COG function: function code KT; Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA