| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yggE [C]
Identifier: 150010457
GI number: 150010457
Start: 4729063
End: 4729758
Strand: Direct
Name: yggE [C]
Synonym: BDI_3897
Alternate gene names: 150010457
Gene position: 4729063-4729758 (Clockwise)
Preceding gene: 150010456
Following gene: 150010463
Centisome position: 98.29
GC content: 48.13
Gene sequence:
>696_bases ATGATAACAAGACTATTATTATTGGCAATGCTCCTGCCGCTAGCCGGCCTGTCACAGGTGCAGGCGCAGGCAGACGGACG CTACATTGAAGTGACCGGGACATCCGAGATTGAGATCGTGCCGGACAGGATTCACTACATTATCGAAATCCGTGAATACT TCGAGGAGGAGTTTGATGGCAGGTCCAAACCGGAGGAATATCGTACAAAGATCTCTTTGGACCGGATCGAACAGGGACTG CGGGAAGTGCTGCATGACGCGGGTATCTCTCCGAATGCCGTCCGTACGCAGGAGATCGGTGATTATTGGCGTAAGCAAGG GCAGGACTTTCTGGTGGCCAAGACCTTCGATATTACGTTACTGGATTTCAAACAGATTGATGAAATCCTCAAACGTATGG ATACCAAAGGTATCCATACCATGCGCATCGGTGAACTGGAAAACAAGGACATGTTGTCCTACCATCAAAAAGGAAAAATC GCGGCCTTGAAAGCGGCGCAGAGGAAAGCGTCCTATCTGGTGGAGGCATTGGGTAAAAAATTGGGACCGGTAATACGTAT TGTAGAAGACGAAGCAGGTAGCAGCCTTCCTTTCTCACAGAGTAACGTGCTGTCCTCCAGTGTCGTTTCATTTGATAGTT TCCGTACAATTAAAAAGAAATACTCTATGCTTGTGCGGTTTGAGATTGCGGATTGA
Upstream 100 bases:
>100_bases ATTCCAAGCAGGCAGGTTACTTTCAGGAAAATACCGAATAGGACTGCAACTCGAAATTTATATGGATACGGAATTTGAAG TAAAATAAATACAACCGCTT
Downstream 100 bases:
>100_bases AAGGAATCGTAACTGCCTGAATATAAGAAATAATGTCGTATACTGCCATTGCCTTCAATAACTTGGTATGAAATTCGAGG AGGATCTTGAATCTAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MITRLLLLAMLLPLAGLSQVQAQADGRYIEVTGTSEIEIVPDRIHYIIEIREYFEEEFDGRSKPEEYRTKISLDRIEQGL REVLHDAGISPNAVRTQEIGDYWRKQGQDFLVAKTFDITLLDFKQIDEILKRMDTKGIHTMRIGELENKDMLSYHQKGKI AALKAAQRKASYLVEALGKKLGPVIRIVEDEAGSSLPFSQSNVLSSSVVSFDSFRTIKKKYSMLVRFEIAD
Sequences:
>Translated_231_residues MITRLLLLAMLLPLAGLSQVQAQADGRYIEVTGTSEIEIVPDRIHYIIEIREYFEEEFDGRSKPEEYRTKISLDRIEQGL REVLHDAGISPNAVRTQEIGDYWRKQGQDFLVAKTFDITLLDFKQIDEILKRMDTKGIHTMRIGELENKDMLSYHQKGKI AALKAAQRKASYLVEALGKKLGPVIRIVEDEAGSSLPFSQSNVLSSSVVSFDSFRTIKKKYSMLVRFEIAD >Mature_231_residues MITRLLLLAMLLPLAGLSQVQAQADGRYIEVTGTSEIEIVPDRIHYIIEIREYFEEEFDGRSKPEEYRTKISLDRIEQGL REVLHDAGISPNAVRTQEIGDYWRKQGQDFLVAKTFDITLLDFKQIDEILKRMDTKGIHTMRIGELENKDMLSYHQKGKI AALKAAQRKASYLVEALGKKLGPVIRIVEDEAGSSLPFSQSNVLSSSVVSFDSFRTIKKKYSMLVRFEIAD
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26342; Mature: 26342
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLLLLAMLLPLAGLSQVQAQADGRYIEVTGTSEIEIVPDRIHYIIEIREYFEEEFDG CHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCC RSKPEEYRTKISLDRIEQGLREVLHDAGISPNAVRTQEIGDYWRKQGQDFLVAKTFDITL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEE LDFKQIDEILKRMDTKGIHTMRIGELENKDMLSYHQKGKIAALKAAQRKASYLVEALGKK ECHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LGPVIRIVEDEAGSSLPFSQSNVLSSSVVSFDSFRTIKKKYSMLVRFEIAD HCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC >Mature Secondary Structure MITRLLLLAMLLPLAGLSQVQAQADGRYIEVTGTSEIEIVPDRIHYIIEIREYFEEEFDG CHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCC RSKPEEYRTKISLDRIEQGLREVLHDAGISPNAVRTQEIGDYWRKQGQDFLVAKTFDITL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEE LDFKQIDEILKRMDTKGIHTMRIGELENKDMLSYHQKGKIAALKAAQRKASYLVEALGKK ECHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LGPVIRIVEDEAGSSLPFSQSNVLSSSVVSFDSFRTIKKKYSMLVRFEIAD HCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA