| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010440
Identifier: 150010440
GI number: 150010440
Start: 4712923
End: 4714077
Strand: Direct
Name: 150010440
Synonym: BDI_3880
Alternate gene names: NA
Gene position: 4712923-4714077 (Clockwise)
Preceding gene: 150010439
Following gene: 150010452
Centisome position: 97.95
GC content: 54.72
Gene sequence:
>1155_bases ATGGAAGCAACAGTCATGCCGGCCACTGCACCGGTACAGAAACAGCAGGGACTCAACCAGGTAGTCATCAACAAGGTACG GAGAATGATAGAGGACAGGCAGGGGGATGTCATGGACACCATCAACCGTCTGCTCAGTGAGGGACGGATCGCGCAGGATT TCATCGCTCCCATCGGGGTAAGCCAACGTAGCAAGGAACGCCCCGTTATCTCTTTCAAAGCGGAAGGAAGGGTACAGATG GCAATGCCCGAAGGGAACTTCAACCTGCACGGCAACGCCATAAGCCAGATTTCGGAGAAGATGGGCATTCCCGCCAAATA CCTGCGCGAGCTTTCCGCCGGGGATGTTTGGCAGAAACAGTTGTGCGCCACCATCCTGAACGAGCATTCGGGATGGACCG AGCGTACACGGGTACTGATACGGGCGGTAGGAATGGAAGTCCGGGGCGTATTGTCGGACTCCTACCGTCGGCTGAACTCA GTGGATATCCTGACCGCTTTCATCCGTGAGGCGGGAGGACAGGGAGCGGTCGTGTCCGATGCCTATATGAACGACACGAA AGTATGGTGTGAGACAATCCTGCCCACTCCGATAGAGATACCCACCCGTAAGAACGGAACGGTCATCATCTTCGCAGGAG CACGCTTCTCCACATCCGACTATGGCAACGGATCGGTCGATATGCGGTCGTTCCTGCTCAACGGGGCGTGCCTGAACGGG ATGGTCAGGGAGTCCGTCATGCGGCAAATACACCTTGGAGGCCGACTGCCGGAATCCCTGTCCCTCTCCCAAAAGACCTA CGAACTGGACACGCAGACCACTGTATCGGCTGTTTCCGACCTGACCAAAGGACTGTACAGCAAAGACACCATCATGCAGA AGGCCATCGAAATTCAAGGAGCATCGGAAATAGACGTGGATTTCGACAAGGAACTGAAGAATCTGGTGCAGAAAGGTGCC TTGTTGAAAAACGAGGGACGTGAGGTCGAGAAACTGCTAATGAACAACAATCCTGACGACGGAGTTACAGGCGGGGCCAC GCTATGGAAACTGACACAGGGAATCACCGCCTTTGCAAGGGAACAGCAGCCGGAACGCTGCCGGGAACTGCATGAAATTT CGGGACAGCTGATGAACCGGGTAAAGATAAATTAA
Upstream 100 bases:
>100_bases TATATCCGTCTGTCAAAAGAGTACAGATCTGAATTTACTAAAACAAGCAAGACAAGCCATAAGAACAAATTGTAATTTAT CAACTTTAAAAACAAAAAAT
Downstream 100 bases:
>100_bases GAGTGGCTAAGACTAAAGCCGTGAACGACGATGGCCAGCATCCGTTCACGGCTTTGCATAATTTCAATCTAAGGTATATA GAACAGTTCAAACTCCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MEATVMPATAPVQKQQGLNQVVINKVRRMIEDRQGDVMDTINRLLSEGRIAQDFIAPIGVSQRSKERPVISFKAEGRVQM AMPEGNFNLHGNAISQISEKMGIPAKYLRELSAGDVWQKQLCATILNEHSGWTERTRVLIRAVGMEVRGVLSDSYRRLNS VDILTAFIREAGGQGAVVSDAYMNDTKVWCETILPTPIEIPTRKNGTVIIFAGARFSTSDYGNGSVDMRSFLLNGACLNG MVRESVMRQIHLGGRLPESLSLSQKTYELDTQTTVSAVSDLTKGLYSKDTIMQKAIEIQGASEIDVDFDKELKNLVQKGA LLKNEGREVEKLLMNNNPDDGVTGGATLWKLTQGITAFAREQQPERCRELHEISGQLMNRVKIN
Sequences:
>Translated_384_residues MEATVMPATAPVQKQQGLNQVVINKVRRMIEDRQGDVMDTINRLLSEGRIAQDFIAPIGVSQRSKERPVISFKAEGRVQM AMPEGNFNLHGNAISQISEKMGIPAKYLRELSAGDVWQKQLCATILNEHSGWTERTRVLIRAVGMEVRGVLSDSYRRLNS VDILTAFIREAGGQGAVVSDAYMNDTKVWCETILPTPIEIPTRKNGTVIIFAGARFSTSDYGNGSVDMRSFLLNGACLNG MVRESVMRQIHLGGRLPESLSLSQKTYELDTQTTVSAVSDLTKGLYSKDTIMQKAIEIQGASEIDVDFDKELKNLVQKGA LLKNEGREVEKLLMNNNPDDGVTGGATLWKLTQGITAFAREQQPERCRELHEISGQLMNRVKIN >Mature_384_residues MEATVMPATAPVQKQQGLNQVVINKVRRMIEDRQGDVMDTINRLLSEGRIAQDFIAPIGVSQRSKERPVISFKAEGRVQM AMPEGNFNLHGNAISQISEKMGIPAKYLRELSAGDVWQKQLCATILNEHSGWTERTRVLIRAVGMEVRGVLSDSYRRLNS VDILTAFIREAGGQGAVVSDAYMNDTKVWCETILPTPIEIPTRKNGTVIIFAGARFSTSDYGNGSVDMRSFLLNGACLNG MVRESVMRQIHLGGRLPESLSLSQKTYELDTQTTVSAVSDLTKGLYSKDTIMQKAIEIQGASEIDVDFDKELKNLVQKGA LLKNEGREVEKLLMNNNPDDGVTGGATLWKLTQGITAFAREQQPERCRELHEISGQLMNRVKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42556; Mature: 42556
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATVMPATAPVQKQQGLNQVVINKVRRMIEDRQGDVMDTINRLLSEGRIAQDFIAPIGV CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCC SQRSKERPVISFKAEGRVQMAMPEGNFNLHGNAISQISEKMGIPAKYLRELSAGDVWQKQ CCCCCCCCEEEEECCCEEEEEECCCCCEECCHHHHHHHHHHCCCHHHHHHCCCCHHHHHH LCATILNEHSGWTERTRVLIRAVGMEVRGVLSDSYRRLNSVDILTAFIREAGGQGAVVSD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC AYMNDTKVWCETILPTPIEIPTRKNGTVIIFAGARFSTSDYGNGSVDMRSFLLNGACLNG CHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH MVRESVMRQIHLGGRLPESLSLSQKTYELDTQTTVSAVSDLTKGLYSKDTIMQKAIEIQG HHHHHHHHHHHCCCCCCCHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASEIDVDFDKELKNLVQKGALLKNEGREVEKLLMNNNPDDGVTGGATLWKLTQGITAFAR CCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH EQQPERCRELHEISGQLMNRVKIN CCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEATVMPATAPVQKQQGLNQVVINKVRRMIEDRQGDVMDTINRLLSEGRIAQDFIAPIGV CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCC SQRSKERPVISFKAEGRVQMAMPEGNFNLHGNAISQISEKMGIPAKYLRELSAGDVWQKQ CCCCCCCCEEEEECCCEEEEEECCCCCEECCHHHHHHHHHHCCCHHHHHHCCCCHHHHHH LCATILNEHSGWTERTRVLIRAVGMEVRGVLSDSYRRLNSVDILTAFIREAGGQGAVVSD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC AYMNDTKVWCETILPTPIEIPTRKNGTVIIFAGARFSTSDYGNGSVDMRSFLLNGACLNG CHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH MVRESVMRQIHLGGRLPESLSLSQKTYELDTQTTVSAVSDLTKGLYSKDTIMQKAIEIQG HHHHHHHHHHHCCCCCCCHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASEIDVDFDKELKNLVQKGALLKNEGREVEKLLMNNNPDDGVTGGATLWKLTQGITAFAR CCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH EQQPERCRELHEISGQLMNRVKIN CCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA