| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010437
Identifier: 150010437
GI number: 150010437
Start: 4710001
End: 4710762
Strand: Direct
Name: 150010437
Synonym: BDI_3877
Alternate gene names: NA
Gene position: 4710001-4710762 (Clockwise)
Preceding gene: 150010436
Following gene: 150010438
Centisome position: 97.89
GC content: 50.52
Gene sequence:
>762_bases ATGGCACCATACAACACACCGCAGGCGATACGTCCGCTTGAGAAAACGATCTGTGATTTCGCCTATTCGAACGGCTACGA TCCGATATCCGTTTTCAACGATTTCCTGCGTTATGTCATTCACGGGTTCTCTCCCGGCGCACCGCCCCTTATGGACTGGA AATACAAACGGCAGCAGAACAGGCATTTTATGGAGATGCTTACCGGATGGATACGGCTCATGCAGCGGGAATTGCAATCC GGCGGATGGTTTGATGCGTTCGGTGACCTCTTCATGGCAATATCTTCCAAAATCGGTCGGCAGGTGAACGGACAGTTCTT TACCCCGCCGGATATCTGCGACCTGATGGTCTTGTGTACCGATTCGGGGGAGACAGCGACAGGAAAACGTATCTGTGACC CGACATGCGGAAGGCTGCTGCTGGCATATCATGTACGCCACCTGGGTAATTATCTGGTTGCAGAAGATCTCAACCATACC TGTTGCCTGATGACCGTTTGCAACATGCTCGTACATGGCTGCATAGGTGAGGTCATCCACCATGACAGCCTCTTCCCCGA AAACTTCATGGACGGCTGGATGGTAAACCATACACTGACTCAGACGGGCATTCCTACCATTCGCCGGATGAGCAAGGAGG AATATCGGACAAGCAGGAACATGTCCGTTGACCTGCTCAGAAAGCGGAAAGAGAAATTGCGCCAAATGCAGCCGGACAAG AAACAATTGCCATATAAACATGGCAGAATTTATAAACAATAA
Upstream 100 bases:
>100_bases AAAGCGGACACCCATCTCTCTTTCCTTGGCATTTCTCCCGTCAGGATACAGACTGACCATAAAAGACATATAGTAACAAT CTATAAAAAATCAGAGTAAT
Downstream 100 bases:
>100_bases ACCGAATGATTATGAAACTGAATGTTAGCAATGAATTGAAATCCCGCCTGATGCATGCGGCGGAAAACGGGAGTGTGATA GCCAAAGACATCCTTTTGGA
Product: type I restriction enzyme, M subunit
Products: NA
Alternate protein names: Type I Restriction System-Like Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAPYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKIGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGRLLLAYHVRHLGNYLVAEDLNHT CCLMTVCNMLVHGCIGEVIHHDSLFPENFMDGWMVNHTLTQTGIPTIRRMSKEEYRTSRNMSVDLLRKRKEKLRQMQPDK KQLPYKHGRIYKQ
Sequences:
>Translated_253_residues MAPYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKIGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGRLLLAYHVRHLGNYLVAEDLNHT CCLMTVCNMLVHGCIGEVIHHDSLFPENFMDGWMVNHTLTQTGIPTIRRMSKEEYRTSRNMSVDLLRKRKEKLRQMQPDK KQLPYKHGRIYKQ >Mature_252_residues APYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQSG GWFDAFGDLFMAISSKIGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGRLLLAYHVRHLGNYLVAEDLNHTC CLMTVCNMLVHGCIGEVIHHDSLFPENFMDGWMVNHTLTQTGIPTIRRMSKEEYRTSRNMSVDLLRKRKEKLRQMQPDKK QLPYKHGRIYKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29363; Mature: 29232
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQN CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHFMEMLTGWIRLMQRELQSGGWFDAFGDLFMAISSKIGRQVNGQFFTPPDICDLMVLCT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEHHCC DSGETATGKRICDPTCGRLLLAYHVRHLGNYLVAEDLNHTCCLMTVCNMLVHGCIGEVIH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH HDSLFPENFMDGWMVNHTLTQTGIPTIRRMSKEEYRTSRNMSVDLLRKRKEKLRQMQPDK HCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH KQLPYKHGRIYKQ HHCCHHCCCCCCC >Mature Secondary Structure APYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQN CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHFMEMLTGWIRLMQRELQSGGWFDAFGDLFMAISSKIGRQVNGQFFTPPDICDLMVLCT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEHHCC DSGETATGKRICDPTCGRLLLAYHVRHLGNYLVAEDLNHTCCLMTVCNMLVHGCIGEVIH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH HDSLFPENFMDGWMVNHTLTQTGIPTIRRMSKEEYRTSRNMSVDLLRKRKEKLRQMQPDK HCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH KQLPYKHGRIYKQ HHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA