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The map label for this gene is fecI [C]

Identifier: 150010409

GI number: 150010409

Start: 4684056

End: 4684673

Strand: Direct

Name: fecI [C]

Synonym: BDI_3847

Alternate gene names: 150010409

Gene position: 4684056-4684673 (Clockwise)

Preceding gene: 150010402

Following gene: 150010411

Centisome position: 97.35

GC content: 38.67

Gene sequence:

>618_bases
GTGGGAGTTTTTGTGCGAGATATCAAAGGGTTGCTTGAATCTGTGTCGGTAGATAACAGGGGAGCTTTCGAACGTTTTTA
TAATTTATATTATGATCAGGTTTTTCGCTTCGCTTATTATTGTTTAGGCGAGAAGGAGGCATGCCGTGAAGTTGTGACAG
ATGTTTTTTTCTCGGTCTGGCAATCTCGGAAACGATTAAAGGAGATTGATAATATAGATACCTATTTATATATTTCTGTA
CGTAACGAGTCTTTTCGTTATCAAGCAAGGAATAAAGACTTGAATAGGGCTTCTTTAAATGAGTTGTTGCCATTAATGGA
AGAGGAAGATGAGGGTTCTCCGGAGGAGCATTTGGAGTTAAAAGAGATGAGAGAGATGCTTGATAAAGCGATTGACGAAC
TTCCTGAGAAATGCCGTCTTGTGTTTTTGATGTCTCGTGAGGAGGGATTGAAAACGAAGGAGATCGCGGAAATATTATCG
GTTCAAGAGAGTACGGTTCGTGTACAGATGAAGATCGCTATAGAAAAATTGGTAGCCCGGTTGAAGCCGAGCTTTCCAAA
TATTTCATTCTCTTTATTGCTGATGTTTATTTTTAATGTGATTTATAGATCTGCTTAA

Upstream 100 bases:

>100_bases
ATAATTTGAATATGCAAGTAAAATATGAGAAAAAATAGTCTGCTTTTTAAAAAGGCATTTAGATTATATTTAGTATGTTT
GCCAAATCAAAGAAAAAGGA

Downstream 100 bases:

>100_bases
GCTTTCTATATGGGGATATTCCCTGTTAGAAGGAAAGATGATAGTTCTTTTATATCAGTAACGATTTTGTTTGTTCCGGC
ATTCGCTAATTCTTCTTCAT

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma Factor; Sigma Factor; RNA Polymerase Sigma-W Factor; RNA Polymerase Sigma-H Factor; ECF-Type RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-E Factor; Sigma-70 Region 2 Subfamily; ECF-Type RNA Polymerase; RNA Polymerase Sigma-24 Subunit; ECF Sigma Factor; RNA Polymerase ECF Sigma Factor; ECF-Type Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MGVFVRDIKGLLESVSVDNRGAFERFYNLYYDQVFRFAYYCLGEKEACREVVTDVFFSVWQSRKRLKEIDNIDTYLYISV
RNESFRYQARNKDLNRASLNELLPLMEEEDEGSPEEHLELKEMREMLDKAIDELPEKCRLVFLMSREEGLKTKEIAEILS
VQESTVRVQMKIAIEKLVARLKPSFPNISFSLLLMFIFNVIYRSA

Sequences:

>Translated_205_residues
MGVFVRDIKGLLESVSVDNRGAFERFYNLYYDQVFRFAYYCLGEKEACREVVTDVFFSVWQSRKRLKEIDNIDTYLYISV
RNESFRYQARNKDLNRASLNELLPLMEEEDEGSPEEHLELKEMREMLDKAIDELPEKCRLVFLMSREEGLKTKEIAEILS
VQESTVRVQMKIAIEKLVARLKPSFPNISFSLLLMFIFNVIYRSA
>Mature_204_residues
GVFVRDIKGLLESVSVDNRGAFERFYNLYYDQVFRFAYYCLGEKEACREVVTDVFFSVWQSRKRLKEIDNIDTYLYISVR
NESFRYQARNKDLNRASLNELLPLMEEEDEGSPEEHLELKEMREMLDKAIDELPEKCRLVFLMSREEGLKTKEIAEILSV
QESTVRVQMKIAIEKLVARLKPSFPNISFSLLLMFIFNVIYRSA

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24228; Mature: 24097

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFVRDIKGLLESVSVDNRGAFERFYNLYYDQVFRFAYYCLGEKEACREVVTDVFFSVW
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QSRKRLKEIDNIDTYLYISVRNESFRYQARNKDLNRASLNELLPLMEEEDEGSPEEHLEL
HHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
KEMREMLDKAIDELPEKCRLVFLMSREEGLKTKEIAEILSVQESTVRVQMKIAIEKLVAR
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKPSFPNISFSLLLMFIFNVIYRSA
HCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVFVRDIKGLLESVSVDNRGAFERFYNLYYDQVFRFAYYCLGEKEACREVVTDVFFSVW
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QSRKRLKEIDNIDTYLYISVRNESFRYQARNKDLNRASLNELLPLMEEEDEGSPEEHLEL
HHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
KEMREMLDKAIDELPEKCRLVFLMSREEGLKTKEIAEILSVQESTVRVQMKIAIEKLVAR
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKPSFPNISFSLLLMFIFNVIYRSA
HCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA