| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is fur [C]
Identifier: 150010347
GI number: 150010347
Start: 4610400
End: 4610861
Strand: Direct
Name: fur [C]
Synonym: BDI_3781
Alternate gene names: 150010347
Gene position: 4610400-4610861 (Clockwise)
Preceding gene: 150010346
Following gene: 150010348
Centisome position: 95.82
GC content: 43.29
Gene sequence:
>462_bases ATGGAAGCGAAAGTTTATACGGAAATGCGTGCGTTGTTTACCGAATATCTAACGGAGAAGAAACTGCGGAAAACCGAGGA GAGATATGCTATATTCAAGGAGATATGTGCTTTTCCCGGGCATTTTGATATGTGTATGCTTTCGGATCGGTTGGAGCAAG ACAACTTCCATGTCAGTAAGGCTACACTCTATAATACGTTGGATGTACTGGTTGATGCCGGTTTGGTGGTGCGTCATCAA ATAACCGTCCAGTCGGTGCAATATGAGTTGAGGATTTATGCCGATACGCATTTGCATTTGGTTTGCACGAGATGCGGGGC CATCCGGGAGCTGCGAAACAGTACGTTGAAAGCGGATATGAGAAACTTGAAAGTCTCTCGTTTTACGCCGGAGTATTATT GTTTGTACATTTATGGCCTATGCAGTAAATGCAAGTTTAAGTTGCAAAGGTCAGTTAAATAA
Upstream 100 bases:
>100_bases GAAATCTATAATGAATTAAAATTCGAGTTTGAATATTATCGGTAAGGCTTTGCGTTTAAAATAAATGCGCTAACTTTGTC GTTTGTGCGGTCTTTAGGAG
Downstream 100 bases:
>100_bases GAATATTAATAGCCTATAATAAATATAGAAAAGATGAAAGTAGACGTTTTGTTAGGATTGCAATGGGGCGACGAGGGCAA AGGCAAGGTTGTCGATGTGC
Product: transcriptional regulator
Products: NA
Alternate protein names: Ferric Uptake Regulator Family Protein; Ferric Uptake Regulation Protein; Ferric Uptake Regulator Protein; Transcriptional Regulator; Ferric-Uptake Regulator; Transcriptional Regulator Fur Family; Ferric Uptake Regulation Protein FUR; FUR Family Transcriptional Regulator; Fur Family Ferric Uptake Regulator; Iron Storage-Related Regulatory Protein; Ferric Uptake Regulation Protein Fur; Fur Family Transcriptional Regulator
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MEAKVYTEMRALFTEYLTEKKLRKTEERYAIFKEICAFPGHFDMCMLSDRLEQDNFHVSKATLYNTLDVLVDAGLVVRHQ ITVQSVQYELRIYADTHLHLVCTRCGAIRELRNSTLKADMRNLKVSRFTPEYYCLYIYGLCSKCKFKLQRSVK
Sequences:
>Translated_153_residues MEAKVYTEMRALFTEYLTEKKLRKTEERYAIFKEICAFPGHFDMCMLSDRLEQDNFHVSKATLYNTLDVLVDAGLVVRHQ ITVQSVQYELRIYADTHLHLVCTRCGAIRELRNSTLKADMRNLKVSRFTPEYYCLYIYGLCSKCKFKLQRSVK >Mature_153_residues MEAKVYTEMRALFTEYLTEKKLRKTEERYAIFKEICAFPGHFDMCMLSDRLEQDNFHVSKATLYNTLDVLVDAGLVVRHQ ITVQSVQYELRIYADTHLHLVCTRCGAIRELRNSTLKADMRNLKVSRFTPEYYCLYIYGLCSKCKFKLQRSVK
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18069; Mature: 18069
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAKVYTEMRALFTEYLTEKKLRKTEERYAIFKEICAFPGHFDMCMLSDRLEQDNFHVSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHH ATLYNTLDVLVDAGLVVRHQITVQSVQYELRIYADTHLHLVCTRCGAIRELRNSTLKADM HHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH RNLKVSRFTPEYYCLYIYGLCSKCKFKLQRSVK HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAKVYTEMRALFTEYLTEKKLRKTEERYAIFKEICAFPGHFDMCMLSDRLEQDNFHVSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHH ATLYNTLDVLVDAGLVVRHQITVQSVQYELRIYADTHLHLVCTRCGAIRELRNSTLKADM HHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH RNLKVSRFTPEYYCLYIYGLCSKCKFKLQRSVK HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA