| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010242
Identifier: 150010242
GI number: 150010242
Start: 4480436
End: 4482910
Strand: Direct
Name: 150010242
Synonym: BDI_3668
Alternate gene names: NA
Gene position: 4480436-4482910 (Clockwise)
Preceding gene: 150010240
Following gene: 150010243
Centisome position: 93.12
GC content: 44.69
Gene sequence:
>2475_bases ATGAAAGAGAAATTGTTTGCCTTATTTTGGGTACTGTTCTTTGCGCTTCCTCTGTATGCGCAAGCGGACAAGACAGGTTC CTATTCAATTAAGGGACAGGTGTTAGACTCGCTGAGTAACGAGTCCGTACCCTATGCGACGTTGAGAATTGCTTTAGCGA AGACCCCCGATAAGCCGGTCAAGCTTTTAGCGTGTGATGTGGATGGTAAGTTTCAGGCACCATTGAGTAGCGCCGGTAAA TACATCATCTCTATGCAATCGATAGGAAAAGCTCCTGCCGAGAAAACATTTACGATCTCGGATAAACAGAGGAACTTGGA TTTGGGTAAGTTGTATATGCAGGAGGATAACCAGCGGCTGGGGGAAGTGACGGTTACGGCACAGAAACCTTTGGTGAAGG CTGAGATCGATAAACTTACCTATAGCTTGGAAGATGATCCGGAGGCACAGACAAACAATACATTGGAAATGCTGCGCAAG GTACCGATGGTAACCGTGGACGGAGATGACCAAATCCAATTGAAAGGCTCCACGAACTTTAAGATCTACATGAATGGCAA GCCTTCTAACCTGTTGAGTAACAATCCAGCTGAGGTATTGAAGAGTATGCCGGCCAATTCCGTGAAAAACATAGAGGTGA TTACAGACCCGGGCGCTAAATATGACGCTGAGGGTATCGGTGGTATTATTAATATCATTACGACGAAAAACGCTCTACAA GGATATACTGGTACGGTTCGTGTGAACGGTAGTTCGTTGGGGCGTGTAGGCGGTGGCGGCTATATATCCCTTAAAGCAGG TAAGTTCGGGTTGACAGCGAATTATAATTACAATTATAATAGGGAGCCTTGGAATGAGTCTACCTCGATACGTGAGGATT TGGAAAATGACGAGCAACATTTCTTGACGCAAAATGGACGTAGGAAGAATAACGGACCCTTCCAGTTTGGTTCGCTGGAA GGTAGTTATGAGATCGACTCCTTGAACTTGCTGACCGTAGGGGCGAACTTATTCCATGGTAAGATGACGAACCGTTCGGA ATACACGGTGAATATGCAGGATATCAATCGTAATCCGGTATACGATTATAATCGTAATTCCGACGCTACGGAAACGTTTG GTTCTACGGACGTGAGCGTGGATTACCAACACTCTACCCATAAAAAAGATGAGTTGCTGACGATCTCCTACCGTTTCAGC CATTCTCCCAATGATAACAAGGATTATACGGAATTAAAGAATGTCGTGAATTACAATCCTTGGCTCGGCTATCCGCAAAA TAATATCAACAAGGCTTCTACGAACGAGCACACCGGGCAGGTGGATTATACGACCCCTACGTGGAAGGATCAGACCTTGG AGGTTGGCGCAAAATATATATTCCGCCAGAGCCGGAGTAATACGGATCGTACCGCTTTCAACGATTCGTTGAATATATGG GAGGACATAACTTCTAAAGATAGCCATTTCCGTCATACCCAACATATCTATTCCGCTTATCTGGGCTATTCGATGAAGTT TGATAAGTTTGGCGTGAAGGCGGGGGTACGTGCGGAAGGAACCGCTTTGGACGTGAAATATGAGATGGCTCCCGATATGA ACTTTGATACCCATTATTTCGACGTGGTGCCAAACGCTACGGTCTCTTATCAATTGAGTATGGCGCAACAGCTTCGCTTG GGGTATAATATGCGTATCCAGCGTCCGGGTATCTGGTATTTGAATCCTTATGTAAACAATGCGGACCCACAGAACATATC CTTCGGTAACCCGAATCTGGACTCGGAGAAAAGTAATAATATAAACTTGAACTATAGTATGTTCGCCCAGAAATTCAGCA TTAACGCGAGCGCTACTTATACGTTCGTCAATAATTCGATCGAGCAATATACCTTTATCGATCCGGAGAATCCGGGTGTT TTCCAAACCACCTACGGTAATATCGGAAAGAAACAATCTACCGGCTTATTCGTATACGCAAATTGGAATCCGGTTCCTTT GTTCCGTATCTATATGAATGGTGGAATGGATTATACGGATTTGAAGAGCGAAAAGAATGATATGGCGAATAGTGGATTCA GCGGACGTATTTTCGCCGGTACGCAGTTTAATTTCCCGTTGGATTTCCGTGTGAACATACAGGGAGGATATTTCTCTCCT TGGATCCAGTTACAGGGGAAAGGCTCTCCATTCTATTTCACGGGAATCTCCGTGAACAAGGATTTCTTGAAGAAAAAGCT ATCTGTCCAGTTGTCTTTCCAAAACCCCTTCTGGAAGCGAATGAAGATGGAAAATACTACTTCCGATGATACCTTCTTCC GTCGTGAGATCAATTACCGTACGATGAGAATGTTAATGGTTAGTGTATCTTATCGTTTTGGCACCTTGAAAGATGCCATC AAGAAAGTAAAAAGAGGTATCAGCAACGATGATATGAAGAGCGGCGGTTCCGGCGGCGGCGAGCAACAGATGTAA
Upstream 100 bases:
>100_bases AGGAAATATGAACATTATTAATGACTTTATTTGTACGATGAAATCGTAAATAGTGTAATTTGCAGTAAAATGTATTATTT TTATAGTGATAGATGAACGT
Downstream 100 bases:
>100_bases GAAATATAGCTTTGAACATGGAGCACACGCTCCGTGTGTTCCGTGTTCAATATAATAATTAAACCTTTTCTTTTGCCATC TTCTATATACTTTCTATCTT
Product: putative TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; Outer Membrane Receptor Family Transporter; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport; Protein Containing nB-Dependent Receptor Plug Domain
Number of amino acids: Translated: 824; Mature: 824
Protein sequence:
>824_residues MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPVKLLACDVDGKFQAPLSSAGK YIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRLGEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRK VPMVTVDGDDQIQLKGSTNFKIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQHFLTQNGRRKNNGPFQFGSLE GSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPVYDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFS HSPNDNKDYTELKNVVNYNPWLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYFDVVPNATVSYQLSMAQQLRL GYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNNINLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGV FQTTYGNIGKKQSTGLFVYANWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYRTMRMLMVSVSYRFGTLKDAI KKVKRGISNDDMKSGGSGGGEQQM
Sequences:
>Translated_824_residues MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPVKLLACDVDGKFQAPLSSAGK YIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRLGEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRK VPMVTVDGDDQIQLKGSTNFKIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQHFLTQNGRRKNNGPFQFGSLE GSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPVYDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFS HSPNDNKDYTELKNVVNYNPWLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYFDVVPNATVSYQLSMAQQLRL GYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNNINLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGV FQTTYGNIGKKQSTGLFVYANWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYRTMRMLMVSVSYRFGTLKDAI KKVKRGISNDDMKSGGSGGGEQQM >Mature_824_residues MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPVKLLACDVDGKFQAPLSSAGK YIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRLGEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRK VPMVTVDGDDQIQLKGSTNFKIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQHFLTQNGRRKNNGPFQFGSLE GSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPVYDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFS HSPNDNKDYTELKNVVNYNPWLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYFDVVPNATVSYQLSMAQQLRL GYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNNINLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGV FQTTYGNIGKKQSTGLFVYANWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYRTMRMLMVSVSYRFGTLKDAI KKVKRGISNDDMKSGGSGGGEQQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93083; Mature: 93083
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPV CCHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHCCCCCCCEEEEEEEEECCCCCCE KLLACDVDGKFQAPLSSAGKYIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRL EEEEECCCCCCCCCHHHCCCEEEEEHHHCCCCCCCEEEECCCCCCCCHHEEEEECCCCCC GEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRKVPMVTVDGDDQIQLKGSTNF CEEEEEECCCCHHEEHHHEEEECCCCCCCCCCHHHHHHHHCCEEEECCCCEEEEECCCEE KIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ EEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCHHC GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQH CCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHH FLTQNGRRKNNGPFQFGSLEGSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPV HHHCCCCCCCCCCEEEECCCCCEEECCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCC YDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFSHSPNDNKDYTELKNVVNYNP CCCCCCCCCHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCC WLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHH EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYF HHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEE DVVPNATVSYQLSMAQQLRLGYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNN EECCCCEEEEEHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC INLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGVFQTTYGNIGKKQSTGLFVYA EEEEHHHEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEE NWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP CCCCCEEEEEEECCCCCHHHCCCHHHHHHCCCCCCEEEECEEECCCEEEEEEECCCEECC WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYR EEEEEECCCCEEEEEEECCHHHHHCEEEEEEEECCCHHHHHCCCCCCCCCCEEEECCCHH TMRMLMVSVSYRFGTLKDAIKKVKRGISNDDMKSGGSGGGEQQM HHEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPV CCHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHCCCCCCCEEEEEEEEECCCCCCE KLLACDVDGKFQAPLSSAGKYIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRL EEEEECCCCCCCCCHHHCCCEEEEEHHHCCCCCCCEEEECCCCCCCCHHEEEEECCCCCC GEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRKVPMVTVDGDDQIQLKGSTNF CEEEEEECCCCHHEEHHHEEEECCCCCCCCCCHHHHHHHHCCEEEECCCCEEEEECCCEE KIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ EEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCHHC GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQH CCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHH FLTQNGRRKNNGPFQFGSLEGSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPV HHHCCCCCCCCCCEEEECCCCCEEECCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCC YDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFSHSPNDNKDYTELKNVVNYNP CCCCCCCCCHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCC WLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHH EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYF HHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEE DVVPNATVSYQLSMAQQLRLGYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNN EECCCCEEEEEHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC INLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGVFQTTYGNIGKKQSTGLFVYA EEEEHHHEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEE NWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP CCCCCEEEEEEECCCCCHHHCCCHHHHHHCCCCCCEEEECEEECCCEEEEEEECCCEECC WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYR EEEEEECCCCEEEEEEECCHHHHHCEEEEEEEECCCHHHHHCCCCCCCCCCEEEECCCHH TMRMLMVSVSYRFGTLKDAIKKVKRGISNDDMKSGGSGGGEQQM HHEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA