Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150010242

Identifier: 150010242

GI number: 150010242

Start: 4480436

End: 4482910

Strand: Direct

Name: 150010242

Synonym: BDI_3668

Alternate gene names: NA

Gene position: 4480436-4482910 (Clockwise)

Preceding gene: 150010240

Following gene: 150010243

Centisome position: 93.12

GC content: 44.69

Gene sequence:

>2475_bases
ATGAAAGAGAAATTGTTTGCCTTATTTTGGGTACTGTTCTTTGCGCTTCCTCTGTATGCGCAAGCGGACAAGACAGGTTC
CTATTCAATTAAGGGACAGGTGTTAGACTCGCTGAGTAACGAGTCCGTACCCTATGCGACGTTGAGAATTGCTTTAGCGA
AGACCCCCGATAAGCCGGTCAAGCTTTTAGCGTGTGATGTGGATGGTAAGTTTCAGGCACCATTGAGTAGCGCCGGTAAA
TACATCATCTCTATGCAATCGATAGGAAAAGCTCCTGCCGAGAAAACATTTACGATCTCGGATAAACAGAGGAACTTGGA
TTTGGGTAAGTTGTATATGCAGGAGGATAACCAGCGGCTGGGGGAAGTGACGGTTACGGCACAGAAACCTTTGGTGAAGG
CTGAGATCGATAAACTTACCTATAGCTTGGAAGATGATCCGGAGGCACAGACAAACAATACATTGGAAATGCTGCGCAAG
GTACCGATGGTAACCGTGGACGGAGATGACCAAATCCAATTGAAAGGCTCCACGAACTTTAAGATCTACATGAATGGCAA
GCCTTCTAACCTGTTGAGTAACAATCCAGCTGAGGTATTGAAGAGTATGCCGGCCAATTCCGTGAAAAACATAGAGGTGA
TTACAGACCCGGGCGCTAAATATGACGCTGAGGGTATCGGTGGTATTATTAATATCATTACGACGAAAAACGCTCTACAA
GGATATACTGGTACGGTTCGTGTGAACGGTAGTTCGTTGGGGCGTGTAGGCGGTGGCGGCTATATATCCCTTAAAGCAGG
TAAGTTCGGGTTGACAGCGAATTATAATTACAATTATAATAGGGAGCCTTGGAATGAGTCTACCTCGATACGTGAGGATT
TGGAAAATGACGAGCAACATTTCTTGACGCAAAATGGACGTAGGAAGAATAACGGACCCTTCCAGTTTGGTTCGCTGGAA
GGTAGTTATGAGATCGACTCCTTGAACTTGCTGACCGTAGGGGCGAACTTATTCCATGGTAAGATGACGAACCGTTCGGA
ATACACGGTGAATATGCAGGATATCAATCGTAATCCGGTATACGATTATAATCGTAATTCCGACGCTACGGAAACGTTTG
GTTCTACGGACGTGAGCGTGGATTACCAACACTCTACCCATAAAAAAGATGAGTTGCTGACGATCTCCTACCGTTTCAGC
CATTCTCCCAATGATAACAAGGATTATACGGAATTAAAGAATGTCGTGAATTACAATCCTTGGCTCGGCTATCCGCAAAA
TAATATCAACAAGGCTTCTACGAACGAGCACACCGGGCAGGTGGATTATACGACCCCTACGTGGAAGGATCAGACCTTGG
AGGTTGGCGCAAAATATATATTCCGCCAGAGCCGGAGTAATACGGATCGTACCGCTTTCAACGATTCGTTGAATATATGG
GAGGACATAACTTCTAAAGATAGCCATTTCCGTCATACCCAACATATCTATTCCGCTTATCTGGGCTATTCGATGAAGTT
TGATAAGTTTGGCGTGAAGGCGGGGGTACGTGCGGAAGGAACCGCTTTGGACGTGAAATATGAGATGGCTCCCGATATGA
ACTTTGATACCCATTATTTCGACGTGGTGCCAAACGCTACGGTCTCTTATCAATTGAGTATGGCGCAACAGCTTCGCTTG
GGGTATAATATGCGTATCCAGCGTCCGGGTATCTGGTATTTGAATCCTTATGTAAACAATGCGGACCCACAGAACATATC
CTTCGGTAACCCGAATCTGGACTCGGAGAAAAGTAATAATATAAACTTGAACTATAGTATGTTCGCCCAGAAATTCAGCA
TTAACGCGAGCGCTACTTATACGTTCGTCAATAATTCGATCGAGCAATATACCTTTATCGATCCGGAGAATCCGGGTGTT
TTCCAAACCACCTACGGTAATATCGGAAAGAAACAATCTACCGGCTTATTCGTATACGCAAATTGGAATCCGGTTCCTTT
GTTCCGTATCTATATGAATGGTGGAATGGATTATACGGATTTGAAGAGCGAAAAGAATGATATGGCGAATAGTGGATTCA
GCGGACGTATTTTCGCCGGTACGCAGTTTAATTTCCCGTTGGATTTCCGTGTGAACATACAGGGAGGATATTTCTCTCCT
TGGATCCAGTTACAGGGGAAAGGCTCTCCATTCTATTTCACGGGAATCTCCGTGAACAAGGATTTCTTGAAGAAAAAGCT
ATCTGTCCAGTTGTCTTTCCAAAACCCCTTCTGGAAGCGAATGAAGATGGAAAATACTACTTCCGATGATACCTTCTTCC
GTCGTGAGATCAATTACCGTACGATGAGAATGTTAATGGTTAGTGTATCTTATCGTTTTGGCACCTTGAAAGATGCCATC
AAGAAAGTAAAAAGAGGTATCAGCAACGATGATATGAAGAGCGGCGGTTCCGGCGGCGGCGAGCAACAGATGTAA

Upstream 100 bases:

>100_bases
AGGAAATATGAACATTATTAATGACTTTATTTGTACGATGAAATCGTAAATAGTGTAATTTGCAGTAAAATGTATTATTT
TTATAGTGATAGATGAACGT

Downstream 100 bases:

>100_bases
GAAATATAGCTTTGAACATGGAGCACACGCTCCGTGTGTTCCGTGTTCAATATAATAATTAAACCTTTTCTTTTGCCATC
TTCTATATACTTTCTATCTT

Product: putative TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; Outer Membrane Receptor Family Transporter; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport; Protein Containing nB-Dependent Receptor Plug Domain

Number of amino acids: Translated: 824; Mature: 824

Protein sequence:

>824_residues
MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPVKLLACDVDGKFQAPLSSAGK
YIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRLGEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRK
VPMVTVDGDDQIQLKGSTNFKIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ
GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQHFLTQNGRRKNNGPFQFGSLE
GSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPVYDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFS
HSPNDNKDYTELKNVVNYNPWLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW
EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYFDVVPNATVSYQLSMAQQLRL
GYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNNINLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGV
FQTTYGNIGKKQSTGLFVYANWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP
WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYRTMRMLMVSVSYRFGTLKDAI
KKVKRGISNDDMKSGGSGGGEQQM

Sequences:

>Translated_824_residues
MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPVKLLACDVDGKFQAPLSSAGK
YIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRLGEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRK
VPMVTVDGDDQIQLKGSTNFKIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ
GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQHFLTQNGRRKNNGPFQFGSLE
GSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPVYDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFS
HSPNDNKDYTELKNVVNYNPWLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW
EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYFDVVPNATVSYQLSMAQQLRL
GYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNNINLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGV
FQTTYGNIGKKQSTGLFVYANWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP
WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYRTMRMLMVSVSYRFGTLKDAI
KKVKRGISNDDMKSGGSGGGEQQM
>Mature_824_residues
MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPVKLLACDVDGKFQAPLSSAGK
YIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRLGEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRK
VPMVTVDGDDQIQLKGSTNFKIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ
GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQHFLTQNGRRKNNGPFQFGSLE
GSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPVYDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFS
HSPNDNKDYTELKNVVNYNPWLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW
EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYFDVVPNATVSYQLSMAQQLRL
GYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNNINLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGV
FQTTYGNIGKKQSTGLFVYANWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP
WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYRTMRMLMVSVSYRFGTLKDAI
KKVKRGISNDDMKSGGSGGGEQQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93083; Mature: 93083

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPV
CCHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHCCCCCCCEEEEEEEEECCCCCCE
KLLACDVDGKFQAPLSSAGKYIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRL
EEEEECCCCCCCCCHHHCCCEEEEEHHHCCCCCCCEEEECCCCCCCCHHEEEEECCCCCC
GEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRKVPMVTVDGDDQIQLKGSTNF
CEEEEEECCCCHHEEHHHEEEECCCCCCCCCCHHHHHHHHCCEEEECCCCEEEEECCCEE
KIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ
EEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCHHC
GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQH
CCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHH
FLTQNGRRKNNGPFQFGSLEGSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPV
HHHCCCCCCCCCCEEEECCCCCEEECCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCC
YDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFSHSPNDNKDYTELKNVVNYNP
CCCCCCCCCHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCC
WLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHH
EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYF
HHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEE
DVVPNATVSYQLSMAQQLRLGYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNN
EECCCCEEEEEHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
INLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGVFQTTYGNIGKKQSTGLFVYA
EEEEHHHEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEE
NWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP
CCCCCEEEEEEECCCCCHHHCCCHHHHHHCCCCCCEEEECEEECCCEEEEEEECCCEECC
WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYR
EEEEEECCCCEEEEEEECCHHHHHCEEEEEEEECCCHHHHHCCCCCCCCCCEEEECCCHH
TMRMLMVSVSYRFGTLKDAIKKVKRGISNDDMKSGGSGGGEQQM
HHEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEKLFALFWVLFFALPLYAQADKTGSYSIKGQVLDSLSNESVPYATLRIALAKTPDKPV
CCHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHCCCCCCCEEEEEEEEECCCCCCE
KLLACDVDGKFQAPLSSAGKYIISMQSIGKAPAEKTFTISDKQRNLDLGKLYMQEDNQRL
EEEEECCCCCCCCCHHHCCCEEEEEHHHCCCCCCCEEEECCCCCCCCHHEEEEECCCCCC
GEVTVTAQKPLVKAEIDKLTYSLEDDPEAQTNNTLEMLRKVPMVTVDGDDQIQLKGSTNF
CEEEEEECCCCHHEEHHHEEEECCCCCCCCCCHHHHHHHHCCEEEECCCCEEEEECCCEE
KIYMNGKPSNLLSNNPAEVLKSMPANSVKNIEVITDPGAKYDAEGIGGIINIITTKNALQ
EEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCHHC
GYTGTVRVNGSSLGRVGGGGYISLKAGKFGLTANYNYNYNREPWNESTSIREDLENDEQH
CCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHH
FLTQNGRRKNNGPFQFGSLEGSYEIDSLNLLTVGANLFHGKMTNRSEYTVNMQDINRNPV
HHHCCCCCCCCCCEEEECCCCCEEECCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCC
YDYNRNSDATETFGSTDVSVDYQHSTHKKDELLTISYRFSHSPNDNKDYTELKNVVNYNP
CCCCCCCCCHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCC
WLGYPQNNINKASTNEHTGQVDYTTPTWKDQTLEVGAKYIFRQSRSNTDRTAFNDSLNIW
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHH
EDITSKDSHFRHTQHIYSAYLGYSMKFDKFGVKAGVRAEGTALDVKYEMAPDMNFDTHYF
HHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEE
DVVPNATVSYQLSMAQQLRLGYNMRIQRPGIWYLNPYVNNADPQNISFGNPNLDSEKSNN
EECCCCEEEEEHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
INLNYSMFAQKFSINASATYTFVNNSIEQYTFIDPENPGVFQTTYGNIGKKQSTGLFVYA
EEEEHHHEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEE
NWNPVPLFRIYMNGGMDYTDLKSEKNDMANSGFSGRIFAGTQFNFPLDFRVNIQGGYFSP
CCCCCEEEEEEECCCCCHHHCCCHHHHHHCCCCCCEEEECEEECCCEEEEEEECCCEECC
WIQLQGKGSPFYFTGISVNKDFLKKKLSVQLSFQNPFWKRMKMENTTSDDTFFRREINYR
EEEEEECCCCEEEEEEECCHHHHHCEEEEEEEECCCHHHHHCCCCCCCCCCEEEECCCHH
TMRMLMVSVSYRFGTLKDAIKKVKRGISNDDMKSGGSGGGEQQM
HHEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA