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The map label for this gene is capD [H]

Identifier: 150010192

GI number: 150010192

Start: 4426999

End: 4428933

Strand: Direct

Name: capD [H]

Synonym: BDI_3615

Alternate gene names: 150010192

Gene position: 4426999-4428933 (Clockwise)

Preceding gene: 150010191

Following gene: 150010193

Centisome position: 92.01

GC content: 51.21

Gene sequence:

>1935_bases
ATGATGGATTTTCATAAGGGCAGATGGCGATTGGCCTTAGGCCGTCTGGTGAATTTGCGGTATATCAACCGTTGGATCAT
TTTTAGTGCGGACCTTTTCGTCTCGCTCTCCGTATCGTTGCTGGGCGTACTAGGAATGTTCTCCATTCTGCATATACGTA
TTGGAGAGTCTGATGTGCTGAAAGTGGGCCTCTCCTCATTTGTGAGCAGTATCGTTTCGTTCTTGCTGTTCAAAGCATAT
CATGGGGTTATTCGCCATTCCACGCTGCGTGGCTTGTGGCGGATCGGTGGTGCTGCGATCGGCAAGTCGCTCTTGATGTT
CCTGCTGCTTTGGCTGTTGAAAGCCCGTTTCAGCCCTTCTATCTATTGGTTGGGTGGAATCATGGACAGTACGTTGACGA
TCGTGATGTTGGTCACGTTGCGTGTCTTCGTGATCAATGTCTATAACAGCGTCCTCCTGCAACTCGGTAAGAAACGCAAG
CGGGTACTGGTCTTTGGCACGGAGGAGGAGAGCGTGATGATCGCCACATCGGCGAACCGTCAGGTATTCATGCAGAATTA
TAGCATCATGGGCTTCCTTTCCTTTGGTAATTCCAAGAAAAGCATCCGGATTGCGGAGTTGCCGGTCTACCAGATCGAGA
ACGTGGAGGATCTGTATCGCTTGATCCCTCGCAACAGCTTGGATGGCGTTCTCTTCCCCAATATAAAGGTTGCCCATCAG
GAGCGTGACCGTTTGATCCGTTATTGCGAGCAGGCCTCTTTGAAGACATTGGTAGTCCCGGAGATGGAGGAGCTACGTGG
AGGTGAGGCGAAACGTTCCGTCCGAGAGATCCGTATCGAGGATTTGCTGGGTCGTGAGGAGATCCATATTAATCTGGACG
AAATCGGCAATCTGTTGGAAGGGAAGACCGTGCTTGTCACGGGAGCCGCCGGCAGTATCGGTAGCGAGATCTGTCGCCAG
CTGGCTCATTTCCCGATTAAGAAGTTGGTTTGCTTCGACTCCGCCGAGACTCCGATGCATAATCTCCGTCTGGAATTGGA
AGAAAAATATAAGGGACTAAACTTTGTCCCGGTGATCGGCGATGTCCGTAGCCCGGACCGTGTGGATTATGTGTTCCGCA
ACTGGCACCCCCAAGTAGTGTTCCATGCGGCGGCCTACAAGCATGTCCCTTTAATGGAGGAGAATCCCTGCGAGGCGATC
CGAACAAACGTGTTCGGTACTCGTGTGATGGCGGATGCCGCTGTAAGCTATGGTGTGGAGAAATTTGTGATGATCAGTAC
GGATAAGGCGGTGAACCCCACGAACATCATGGGCTGTAGCAAGCGCTTGGCTGAGATCTATGTACAGAGTCTGAGCCTTG
CGATCGAGCGAGGAGAGGTGAAAGGCGAGACGCGTTTCATTACGACCCGCTTTGGAAACGTATTGGGTAGCAACGGTTCG
GTTATCCCCCGTTTCCGGGAACAAATCGCTCAGGGAGGTCCAGTGACGGTCACCCATCCCGATATCATCCGTTACTTTAT
GACTATCCCGGAGGCTTGTCGCCTGGTGTTAGAGGCCGGTACAATGGGCAAGGGTGGTGAGATCTTTATCTTCGATATGG
GAGAGCCGGTGAAGATAGCGGATTTGGCGAAGCGCATGATCGAGCTGTCCGGATTACAGGTAGACAAAGACATCGAGATC
AAGTACACTGGTCTCCGCCCCGGTGAGAAATTGTATGAAGAGCTACTGAACAACAAGGAGAACACGAAAGAGACCCCTCA
CGAGAAGATTCGAGTGGCGGCGGTTCGTGAGTATGACTATAAGGATGTGGTAGAACATATCAATGTGTTAACGGAATTGT
CCCTCCGTGTTCAGATCCTCTCGATGGTAAAGGAGATGAAAGCCTTTGTCCCCGAGTTTAAGAGTCAGAATTCTCAGTTT
GAGGAGTTGGATTGA

Upstream 100 bases:

>100_bases
CGGAAAGCTGTATTACGCCCGCCGCTTCGGGACGCCACGAGTCACAGGCACCGCCGTTGGGAAAAGTTAGGGCACTGAAT
ATAAAACAAACAAAATACAA

Downstream 100 bases:

>100_bases
ATACTTACAAACGTAAAAATAATTGACTAAAAATAACGAATGATGGAATTTAAGCGGAATATACTTATAACAGGAGGAGC
CGGATTTATTGGTAGCCATG

Product: putative nucleoside-diphosphate sugar epimerase/dehydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MMDFHKGRWRLALGRLVNLRYINRWIIFSADLFVSLSVSLLGVLGMFSILHIRIGESDVLKVGLSSFVSSIVSFLLFKAY
HGVIRHSTLRGLWRIGGAAIGKSLLMFLLLWLLKARFSPSIYWLGGIMDSTLTIVMLVTLRVFVINVYNSVLLQLGKKRK
RVLVFGTEEESVMIATSANRQVFMQNYSIMGFLSFGNSKKSIRIAELPVYQIENVEDLYRLIPRNSLDGVLFPNIKVAHQ
ERDRLIRYCEQASLKTLVVPEMEELRGGEAKRSVREIRIEDLLGREEIHINLDEIGNLLEGKTVLVTGAAGSIGSEICRQ
LAHFPIKKLVCFDSAETPMHNLRLELEEKYKGLNFVPVIGDVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAI
RTNVFGTRVMADAAVSYGVEKFVMISTDKAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGSNGS
VIPRFREQIAQGGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFDMGEPVKIADLAKRMIELSGLQVDKDIEI
KYTGLRPGEKLYEELLNNKENTKETPHEKIRVAAVREYDYKDVVEHINVLTELSLRVQILSMVKEMKAFVPEFKSQNSQF
EELD

Sequences:

>Translated_644_residues
MMDFHKGRWRLALGRLVNLRYINRWIIFSADLFVSLSVSLLGVLGMFSILHIRIGESDVLKVGLSSFVSSIVSFLLFKAY
HGVIRHSTLRGLWRIGGAAIGKSLLMFLLLWLLKARFSPSIYWLGGIMDSTLTIVMLVTLRVFVINVYNSVLLQLGKKRK
RVLVFGTEEESVMIATSANRQVFMQNYSIMGFLSFGNSKKSIRIAELPVYQIENVEDLYRLIPRNSLDGVLFPNIKVAHQ
ERDRLIRYCEQASLKTLVVPEMEELRGGEAKRSVREIRIEDLLGREEIHINLDEIGNLLEGKTVLVTGAAGSIGSEICRQ
LAHFPIKKLVCFDSAETPMHNLRLELEEKYKGLNFVPVIGDVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAI
RTNVFGTRVMADAAVSYGVEKFVMISTDKAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGSNGS
VIPRFREQIAQGGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFDMGEPVKIADLAKRMIELSGLQVDKDIEI
KYTGLRPGEKLYEELLNNKENTKETPHEKIRVAAVREYDYKDVVEHINVLTELSLRVQILSMVKEMKAFVPEFKSQNSQF
EELD
>Mature_644_residues
MMDFHKGRWRLALGRLVNLRYINRWIIFSADLFVSLSVSLLGVLGMFSILHIRIGESDVLKVGLSSFVSSIVSFLLFKAY
HGVIRHSTLRGLWRIGGAAIGKSLLMFLLLWLLKARFSPSIYWLGGIMDSTLTIVMLVTLRVFVINVYNSVLLQLGKKRK
RVLVFGTEEESVMIATSANRQVFMQNYSIMGFLSFGNSKKSIRIAELPVYQIENVEDLYRLIPRNSLDGVLFPNIKVAHQ
ERDRLIRYCEQASLKTLVVPEMEELRGGEAKRSVREIRIEDLLGREEIHINLDEIGNLLEGKTVLVTGAAGSIGSEICRQ
LAHFPIKKLVCFDSAETPMHNLRLELEEKYKGLNFVPVIGDVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAI
RTNVFGTRVMADAAVSYGVEKFVMISTDKAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGSNGS
VIPRFREQIAQGGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFDMGEPVKIADLAKRMIELSGLQVDKDIEI
KYTGLRPGEKLYEELLNNKENTKETPHEKIRVAAVREYDYKDVVEHINVLTELSLRVQILSMVKEMKAFVPEFKSQNSQF
EELD

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Homo sapiens, GI7657641, Length=291, Percent_Identity=26.8041237113402, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 72954; Mature: 72954

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDFHKGRWRLALGRLVNLRYINRWIIFSADLFVSLSVSLLGVLGMFSILHIRIGESDVL
CCCCCCCCHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH
KVGLSSFVSSIVSFLLFKAYHGVIRHSTLRGLWRIGGAAIGKSLLMFLLLWLLKARFSPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IYWLGGIMDSTLTIVMLVTLRVFVINVYNSVLLQLGKKRKRVLVFGTEEESVMIATSANR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCC
QVFMQNYSIMGFLSFGNSKKSIRIAELPVYQIENVEDLYRLIPRNSLDGVLFPNIKVAHQ
EEEEECCEEEEEEEECCCCCCEEEEECCCHHHCCHHHHHHHCCCCCCCCEECCCEEEHHH
ERDRLIRYCEQASLKTLVVPEMEELRGGEAKRSVREIRIEDLLGREEIHINLDEIGNLLE
HHHHHHHHHHHCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHC
GKTVLVTGAAGSIGSEICRQLAHFPIKKLVCFDSAETPMHNLRLELEEKYKGLNFVPVIG
CCEEEEECCCCCHHHHHHHHHHHCCHHHHEEECCCCCCHHHHEEEEHHHHCCCCEEEEEC
DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE
CCCCCCHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
KFVMISTDKAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGSNGS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHCCCCC
VIPRFREQIAQGGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFDMGEPVKIA
CCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHH
DLAKRMIELSGLQVDKDIEIKYTGLRPGEKLYEELLNNKENTKETPHEKIRVAAVREYDY
HHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHEEEEHHHCCCH
KDVVEHINVLTELSLRVQILSMVKEMKAFVPEFKSQNSQFEELD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMDFHKGRWRLALGRLVNLRYINRWIIFSADLFVSLSVSLLGVLGMFSILHIRIGESDVL
CCCCCCCCHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH
KVGLSSFVSSIVSFLLFKAYHGVIRHSTLRGLWRIGGAAIGKSLLMFLLLWLLKARFSPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IYWLGGIMDSTLTIVMLVTLRVFVINVYNSVLLQLGKKRKRVLVFGTEEESVMIATSANR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCC
QVFMQNYSIMGFLSFGNSKKSIRIAELPVYQIENVEDLYRLIPRNSLDGVLFPNIKVAHQ
EEEEECCEEEEEEEECCCCCCEEEEECCCHHHCCHHHHHHHCCCCCCCCEECCCEEEHHH
ERDRLIRYCEQASLKTLVVPEMEELRGGEAKRSVREIRIEDLLGREEIHINLDEIGNLLE
HHHHHHHHHHHCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHC
GKTVLVTGAAGSIGSEICRQLAHFPIKKLVCFDSAETPMHNLRLELEEKYKGLNFVPVIG
CCEEEEECCCCCHHHHHHHHHHHCCHHHHEEECCCCCCHHHHEEEEHHHHCCCCEEEEEC
DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE
CCCCCCHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
KFVMISTDKAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGSNGS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHCCCCC
VIPRFREQIAQGGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFDMGEPVKIA
CCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHH
DLAKRMIELSGLQVDKDIEIKYTGLRPGEKLYEELLNNKENTKETPHEKIRVAAVREYDY
HHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHEEEEHHHCCCH
KDVVEHINVLTELSLRVQILSMVKEMKAFVPEFKSQNSQFEELD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]