| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010097
Identifier: 150010097
GI number: 150010097
Start: 4304158
End: 4305423
Strand: Direct
Name: 150010097
Synonym: BDI_3517
Alternate gene names: NA
Gene position: 4304158-4305423 (Clockwise)
Preceding gene: 150010095
Following gene: 150010098
Centisome position: 89.46
GC content: 43.21
Gene sequence:
>1266_bases ATGAGATTCAAGAAATACATTCTTTTATCGTTGGTGCTATGCGGATTTGCCGCTTGTTCCGATGATAATGAAATAGAAAT TCCAAAGGCTCCTGTCTTGGAGAAAGCTCAACTAGCTTTGGCTATCAAGAGTGAGGAGGGGGCGGTTACGAAGACCGGAG AAACTACTCCAACGGATGCGGACGTGAATACGCTAACGGTTGGGGTGTTTGGAGTTGATGGATGGAGTGTGATATATACA AAAGATGCTACTCCTAACTCTGATGGGACAAAGGATGTCGGTCCGCAAGAAGTGTATGCGGGTGAAGCTCATGTAGTGGT TGTGGCGAACGCTGCTCCTGTTATCCAAACCGAATTGGCAAAGGCTAAGGATATAACTGACTTTATTGAAACAACAATCA ATCTGTCTGACGAGACTTTGACAAAAGGCTTGACGATGAGTAGTAAAGTGCTTGACGTGACATTAGTGGCAAATACGACC AACTATATTGGTTATGATGATGAGGTTGGTGATATAACGGTAAAAGATATTTCTGGTAAGGAAGTTTATGGCGCAGGCCC GGTTCCCTTGGTTCGAGATGTCGCTTCGATCGCTTTGGCTGGTGCAGACATAGGTAATCCAGAAAATGCGAATTATGAAA GTAAGTCCTTCGTTTTGAAGGAGGTCTTTATCGCTAGTGCGAAAGGTGTATCAAGCGTAGCTTCTACTGAGGAGTGGGGG ACGATCGAGAAAGATTTTTTTGGAGATACCCATTTTGGATACTTAGATTATAAGGTAGGTCTACTATTTCTAACGTCTCC GAATAATATCGACGAAGGTTCTTACAAAAAAGGACTCCAGACGAAATATGACGCATTGGCAAAGAAGCATGTTGAGAATG ATCCAGCCTTGAATCATGAATTTTATGTTTACGAGAATACAAAGGGTGAGGTGAAGTCCGGTGAATCTAACGTCAATGAG GCTTATGCCAACCATACCTTATTGATCGTAAAAGGTGATTATACCTATCTCCCGCAAGGTGCGAAAGAATCTATTACGAA AGAGAATTGTTATTATGCGATTCCTGTCGGAGAAGAAGTGACGATTGATGGCACGGAAAAAAGGAGTAAGTTTTACGTCC AACGTAACTACAAATACGAGATCTCTTTAACGATTATCGGCCCCGGTTCCGAGATCCCATACGACCCGATGATCTCCACC AATGTGAGCGCATCCGTGAAAGTGGAGCCATGGAACGTGAAGACTATCCATGAGGAAGTAGAATAA
Upstream 100 bases:
>100_bases TACATTTGTCTCTTATTATAGAGAGTTCTGCCTATCAGCACCACGATATATCCTTTCTATTTTTGTCACATATTAATGTG AGAACAAAAAATATTATACT
Downstream 100 bases:
>100_bases AGCAATATAGGGTAAAATAATTGATAAGAAAAAATTAGGATTATGAAACACATACTGTTTACAAAGGAATTGCTTCTCTT GGTTGTGGCTTTGTTCGCTA
Product: putative fimbrilin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MRFKKYILLSLVLCGFAACSDDNEIEIPKAPVLEKAQLALAIKSEEGAVTKTGETTPTDADVNTLTVGVFGVDGWSVIYT KDATPNSDGTKDVGPQEVYAGEAHVVVVANAAPVIQTELAKAKDITDFIETTINLSDETLTKGLTMSSKVLDVTLVANTT NYIGYDDEVGDITVKDISGKEVYGAGPVPLVRDVASIALAGADIGNPENANYESKSFVLKEVFIASAKGVSSVASTEEWG TIEKDFFGDTHFGYLDYKVGLLFLTSPNNIDEGSYKKGLQTKYDALAKKHVENDPALNHEFYVYENTKGEVKSGESNVNE AYANHTLLIVKGDYTYLPQGAKESITKENCYYAIPVGEEVTIDGTEKRSKFYVQRNYKYEISLTIIGPGSEIPYDPMIST NVSASVKVEPWNVKTIHEEVE
Sequences:
>Translated_421_residues MRFKKYILLSLVLCGFAACSDDNEIEIPKAPVLEKAQLALAIKSEEGAVTKTGETTPTDADVNTLTVGVFGVDGWSVIYT KDATPNSDGTKDVGPQEVYAGEAHVVVVANAAPVIQTELAKAKDITDFIETTINLSDETLTKGLTMSSKVLDVTLVANTT NYIGYDDEVGDITVKDISGKEVYGAGPVPLVRDVASIALAGADIGNPENANYESKSFVLKEVFIASAKGVSSVASTEEWG TIEKDFFGDTHFGYLDYKVGLLFLTSPNNIDEGSYKKGLQTKYDALAKKHVENDPALNHEFYVYENTKGEVKSGESNVNE AYANHTLLIVKGDYTYLPQGAKESITKENCYYAIPVGEEVTIDGTEKRSKFYVQRNYKYEISLTIIGPGSEIPYDPMIST NVSASVKVEPWNVKTIHEEVE >Mature_421_residues MRFKKYILLSLVLCGFAACSDDNEIEIPKAPVLEKAQLALAIKSEEGAVTKTGETTPTDADVNTLTVGVFGVDGWSVIYT KDATPNSDGTKDVGPQEVYAGEAHVVVVANAAPVIQTELAKAKDITDFIETTINLSDETLTKGLTMSSKVLDVTLVANTT NYIGYDDEVGDITVKDISGKEVYGAGPVPLVRDVASIALAGADIGNPENANYESKSFVLKEVFIASAKGVSSVASTEEWG TIEKDFFGDTHFGYLDYKVGLLFLTSPNNIDEGSYKKGLQTKYDALAKKHVENDPALNHEFYVYENTKGEVKSGESNVNE AYANHTLLIVKGDYTYLPQGAKESITKENCYYAIPVGEEVTIDGTEKRSKFYVQRNYKYEISLTIIGPGSEIPYDPMIST NVSASVKVEPWNVKTIHEEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45776; Mature: 45776
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFKKYILLSLVLCGFAACSDDNEIEIPKAPVLEKAQLALAIKSEEGAVTKTGETTPTDA CCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCC DVNTLTVGVFGVDGWSVIYTKDATPNSDGTKDVGPQEVYAGEAHVVVVANAAPVIQTELA CCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHEECCCEEEEEEECCCCHHHHHHH KAKDITDFIETTINLSDETLTKGLTMSSKVLDVTLVANTTNYIGYDDEVGDITVKDISGK HHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCC EVYGAGPVPLVRDVASIALAGADIGNPENANYESKSFVLKEVFIASAKGVSSVASTEEWG EEECCCCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHCC TIEKDFFGDTHFGYLDYKVGLLFLTSPNNIDEGSYKKGLQTKYDALAKKHVENDPALNHE CCCHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCE FYVYENTKGEVKSGESNVNEAYANHTLLIVKGDYTYLPQGAKESITKENCYYAIPVGEEV EEEEECCCCCCCCCCCCHHHHHCCEEEEEEECCEEECCCCCHHHHCCCCCEEEEECCCEE TIDGTEKRSKFYVQRNYKYEISLTIIGPGSEIPYDPMISTNVSASVKVEPWNVKTIHEEV EECCCCCCCEEEEEECEEEEEEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEHHHHHC E C >Mature Secondary Structure MRFKKYILLSLVLCGFAACSDDNEIEIPKAPVLEKAQLALAIKSEEGAVTKTGETTPTDA CCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCC DVNTLTVGVFGVDGWSVIYTKDATPNSDGTKDVGPQEVYAGEAHVVVVANAAPVIQTELA CCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHEECCCEEEEEEECCCCHHHHHHH KAKDITDFIETTINLSDETLTKGLTMSSKVLDVTLVANTTNYIGYDDEVGDITVKDISGK HHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCC EVYGAGPVPLVRDVASIALAGADIGNPENANYESKSFVLKEVFIASAKGVSSVASTEEWG EEECCCCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHCC TIEKDFFGDTHFGYLDYKVGLLFLTSPNNIDEGSYKKGLQTKYDALAKKHVENDPALNHE CCCHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCE FYVYENTKGEVKSGESNVNEAYANHTLLIVKGDYTYLPQGAKESITKENCYYAIPVGEEV EEEEECCCCCCCCCCCCHHHHHCCEEEEEEECCEEECCCCCHHHHCCCCCEEEEECCCEE TIDGTEKRSKFYVQRNYKYEISLTIIGPGSEIPYDPMISTNVSASVKVEPWNVKTIHEEV EECCCCCCCEEEEEECEEEEEEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEHHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA