| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010044
Identifier: 150010044
GI number: 150010044
Start: 4222354
End: 4223637
Strand: Direct
Name: 150010044
Synonym: BDI_3463
Alternate gene names: NA
Gene position: 4222354-4223637 (Clockwise)
Preceding gene: 150010043
Following gene: 150010045
Centisome position: 87.76
GC content: 45.25
Gene sequence:
>1284_bases ATGATTAAATCTATTATAATTATGCGGAAACTTTTTTATTGGGCGTTTGCCTTTAGCCTTTGCGTCTTAATGGGATGCAA GGATGATGGAGTGAGAGTGGAGGTCGTGCGGTATGCTATCAACGAACCGGTATTCATGTCGATCTCCGAGTTTCGGAATT CAGTGAAGGTGACGGATGAGGTGGTGCCAATCACCAAGCGGGGTAAGATCTGTTTCTATAAGGATTACCTGTATATTTCT TCCCCGGATAAGGGCATCCATATCGTGGATAACAGGAATCCGGCATCTCCCCGGATAGTGGGCTTTGTAGAATTGATCGG TAACGAGGATCTCTCGATCAAGGATGATAAATTGTATGCGGATTCGTATGTGGATCTGGTCTGGTTCGATATCTCCGATC CGGAGAGACCTGAATTGGAAGGTCGTGTGGAGAACGCTTTCCGTTATGCGCTTCCGACCATAGAGAATGGCTATGGGTTC GATTATAATATGTGTTATTCGGAAGAAGCGAGAGCGAAAGGTGTCGTGGTTGGTTGGGAGCCGAAGGAACGGGAGGAAAC CATTTACCATTATCCGAGTTATGGCGGTGATCTGATGGCGAACGATGCGGCGCCGGGTACTTCCACGCAGGGCGTGAACG GATCTATGGCTCGTTTTTCTATTTATGGTAAGTACTTATATACGGTAGAACAGAATATCATGTGTGTTTTCGACCTGTCT GGAGACAAGCCTGTCTTGACGACAAACGACATTTGGTTGCAACGTGATGTCGAGACTCTTTTCAACTATAAAGATAAGAT GTTCATGGGAACTCCGACCGGCATGTTGATCTATTCGCTGGAAGATCCGTTAGCGCCTAAGTATCGTTCTTCCGTAAGTC ATGTCTTTGGTTGTGATCCGGTTGTCGTGGAGGATGACTTAGCGTATGTGACCGTGCATTCCGGAAATACTTGCGGGCAA AATACCAATGAACTGATGCTCATAGATGTAAGTGATGTGGACCAACCGAACCTGCTGGTTACTTATGGCATGAAATGTCC GAAAGGATTAGGTATCGATAACGGTACTTTATTCCTCTGTGACGAAGGGTTAAAGGTCTTCAATGCGAAAGATCCTATGA CCTTGCTGGCTAATCAGCTTGTTCATTATGCAGGTATGGAGGGTTACGATGTAATCCCTTTTAGGAATACCTTGATGATG ATCGCCGATGATGGCCTTTACCAATACGATTATTCCAATTTACAGGCAATATCTCAGTTAAGTAAATTGCCAATGGGCGA ATAG
Upstream 100 bases:
>100_bases CTCGCTTCTCCCATTATTTTGACTGTGATCAACCGGCTAGTATCCGTACGGACAAGCCGTTGGGATTTGGGTTGAGCGCA GGTATACGATATGCTTTTTA
Downstream 100 bases:
>100_bases AGTTTAATATTCCTCTTCACTATTTGCTTTGTAAGGCATTTACGGGATTACGAGGTGCCGCTTTATAACTATGCCTGCTT ACGGTCAGTAACGTAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Lvivd Repeat-Containing Protein; LVIVD Repeat Superfamily
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MIKSIIIMRKLFYWAFAFSLCVLMGCKDDGVRVEVVRYAINEPVFMSISEFRNSVKVTDEVVPITKRGKICFYKDYLYIS SPDKGIHIVDNRNPASPRIVGFVELIGNEDLSIKDDKLYADSYVDLVWFDISDPERPELEGRVENAFRYALPTIENGYGF DYNMCYSEEARAKGVVVGWEPKEREETIYHYPSYGGDLMANDAAPGTSTQGVNGSMARFSIYGKYLYTVEQNIMCVFDLS GDKPVLTTNDIWLQRDVETLFNYKDKMFMGTPTGMLIYSLEDPLAPKYRSSVSHVFGCDPVVVEDDLAYVTVHSGNTCGQ NTNELMLIDVSDVDQPNLLVTYGMKCPKGLGIDNGTLFLCDEGLKVFNAKDPMTLLANQLVHYAGMEGYDVIPFRNTLMM IADDGLYQYDYSNLQAISQLSKLPMGE
Sequences:
>Translated_427_residues MIKSIIIMRKLFYWAFAFSLCVLMGCKDDGVRVEVVRYAINEPVFMSISEFRNSVKVTDEVVPITKRGKICFYKDYLYIS SPDKGIHIVDNRNPASPRIVGFVELIGNEDLSIKDDKLYADSYVDLVWFDISDPERPELEGRVENAFRYALPTIENGYGF DYNMCYSEEARAKGVVVGWEPKEREETIYHYPSYGGDLMANDAAPGTSTQGVNGSMARFSIYGKYLYTVEQNIMCVFDLS GDKPVLTTNDIWLQRDVETLFNYKDKMFMGTPTGMLIYSLEDPLAPKYRSSVSHVFGCDPVVVEDDLAYVTVHSGNTCGQ NTNELMLIDVSDVDQPNLLVTYGMKCPKGLGIDNGTLFLCDEGLKVFNAKDPMTLLANQLVHYAGMEGYDVIPFRNTLMM IADDGLYQYDYSNLQAISQLSKLPMGE >Mature_427_residues MIKSIIIMRKLFYWAFAFSLCVLMGCKDDGVRVEVVRYAINEPVFMSISEFRNSVKVTDEVVPITKRGKICFYKDYLYIS SPDKGIHIVDNRNPASPRIVGFVELIGNEDLSIKDDKLYADSYVDLVWFDISDPERPELEGRVENAFRYALPTIENGYGF DYNMCYSEEARAKGVVVGWEPKEREETIYHYPSYGGDLMANDAAPGTSTQGVNGSMARFSIYGKYLYTVEQNIMCVFDLS GDKPVLTTNDIWLQRDVETLFNYKDKMFMGTPTGMLIYSLEDPLAPKYRSSVSHVFGCDPVVVEDDLAYVTVHSGNTCGQ NTNELMLIDVSDVDQPNLLVTYGMKCPKGLGIDNGTLFLCDEGLKVFNAKDPMTLLANQLVHYAGMEGYDVIPFRNTLMM IADDGLYQYDYSNLQAISQLSKLPMGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48188; Mature: 48188
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSIIIMRKLFYWAFAFSLCVLMGCKDDGVRVEVVRYAINEPVFMSISEFRNSVKVTDE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEHHHHCCCEEECCE VVPITKRGKICFYKDYLYISSPDKGIHIVDNRNPASPRIVGFVELIGNEDLSIKDDKLYA EEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEECCEEEE DSYVDLVWFDISDPERPELEGRVENAFRYALPTIENGYGFDYNMCYSEEARAKGVVVGWE CCEEEEEEEECCCCCCCCCCCHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCEEEEECC PKEREETIYHYPSYGGDLMANDAAPGTSTQGVNGSMARFSIYGKYLYTVEQNIMCVFDLS CCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEECC GDKPVLTTNDIWLQRDVETLFNYKDKMFMGTPTGMLIYSLEDPLAPKYRSSVSHVFGCDP CCCCEEEECCEEEEECHHHHHCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCC VVVEDDLAYVTVHSGNTCGQNTNELMLIDVSDVDQPNLLVTYGMKCPKGLGIDNGTLFLC EEEECCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEE DEGLKVFNAKDPMTLLANQLVHYAGMEGYDVIPFRNTLMMIADDGLYQYDYSNLQAISQL ECCCEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCEEEECCHHHHHHHHH SKLPMGE HHCCCCC >Mature Secondary Structure MIKSIIIMRKLFYWAFAFSLCVLMGCKDDGVRVEVVRYAINEPVFMSISEFRNSVKVTDE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEHHHHCCCEEECCE VVPITKRGKICFYKDYLYISSPDKGIHIVDNRNPASPRIVGFVELIGNEDLSIKDDKLYA EEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEECCEEEE DSYVDLVWFDISDPERPELEGRVENAFRYALPTIENGYGFDYNMCYSEEARAKGVVVGWE CCEEEEEEEECCCCCCCCCCCHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCEEEEECC PKEREETIYHYPSYGGDLMANDAAPGTSTQGVNGSMARFSIYGKYLYTVEQNIMCVFDLS CCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEECC GDKPVLTTNDIWLQRDVETLFNYKDKMFMGTPTGMLIYSLEDPLAPKYRSSVSHVFGCDP CCCCEEEECCEEEEECHHHHHCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCC VVVEDDLAYVTVHSGNTCGQNTNELMLIDVSDVDQPNLLVTYGMKCPKGLGIDNGTLFLC EEEECCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEE DEGLKVFNAKDPMTLLANQLVHYAGMEGYDVIPFRNTLMMIADDGLYQYDYSNLQAISQL ECCCEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCEEEECCHHHHHHHHH SKLPMGE HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA