| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009962
Identifier: 150009962
GI number: 150009962
Start: 4102494
End: 4104149
Strand: Direct
Name: 150009962
Synonym: BDI_3380
Alternate gene names: NA
Gene position: 4102494-4104149 (Clockwise)
Preceding gene: 150009961
Following gene: 150009963
Centisome position: 85.27
GC content: 42.39
Gene sequence:
>1656_bases ATGAAACTAAATAGAATTTTAAAATATGCCGCTGTATCGGCTTTGGTAGTATCTACCGGTGTTATGACCATGGGCTGTAC AGATAATTTTGAAAATTTAAATACTGATCCCTATGAGGTTGATCCAGATGAACTTCCGTTCTCTGCCCAATTTAAGGAGC CATTCTCTTATGTCTATGCTCCGCAGCAGAACTTGTTCCAATATTGCTTCAACCTAAATATTGATTTGTTTAGCGGCTAC TTCATGACTCCACATAACTTTAATGGTTCCGGTAATGTTGATTATGCGTTGAACCGTGGTTTCTGTGGTGGTATGTATGA GAATGTATATCTTCATATTTTCAACAATACCCGTCGTCTGATTGCTTCTTGTGATGAGCAAGGCTTAAGTGATTATGGAG CGATGATGCGTGTCGTACAAGCTTATGCGATCCAGATGTTGACGGATGCCTATGGCCCAGTGGCCTATAGTTCTGTTATC GAAGATCCTACGGGTGGAGCTTCTTTCTCTTATGATACTCAGGAAAGTGTCTACAATGCTTTGTTTACTTTGGTGGATGA AGCGATCGCTGGATTTAAGGGAACTGCATCTGTTGCGGATATGCAAGCATTTGACTATTGGTGTAATGGTGATATCGCTT TGTGGAAGAAGGTCGCTAATCAATTGAAACTACGTTTGGCTATGCGTATCGTAAAGGTGAACCCTACATTGGCGAAGCAA AAAGCGGAGGAAGCCGTTCAAGGAGGCGTATTGACTTCCGCTGATCGTGATATCTTGATCAACCAAGGTTTGAGCAATGA GTTGACTCGTATGTTTGAGTGGGGTGATTGTGGAATGAATGCTAGCTTAATCACGATGTTGGAAGGTTTCAAAGATCCTC GTTTACCTTTGTATGTGACCAAGAATCAAGCGGCTGTTACTTGTGAAGATGGCTCGACAATTGAGGAGGGGACAAAGTAT CTTGGTGTTCGCGGCGGATGTAACTTACCTTCTAAGCCAAATCAATGGGGTAATTTCTCTAAAGTGATTTGCACTTATAC GACCGCTTTCCCTGTCATGAAAGTTGCTGAGGGTTATTTTTTACGTGCTGAAGGTGCTTTACGTGGCTGGAGCATGGGAG GTAGCGCTAAAGATCTATATGAGGAGGGCATTCGTATTTCTATCAAGAACGAATTGGCTTATAAGGGCAGTATTGCAGGT GTAACTTCTATCTCAGATGCGGAAATAGACGCTTATCTCAATGGAACCAGTGGACAGATTGACTTTGTTGACCCGGTTAA GGCGGAAAATAGTATAAAGGCGATGAATACACTAGGTGTTAAATGGGACGAAGGTGCTAGTAAGGAGGAGAAGTTGCAAC GTATCATTACTCAGAAATGGATCGCTAACTTCCCATTGTCTTGTGAGGCTTGGGCTGAATACCGTCGTACAGGCTATCCT AAATTATTCCCGAATCGTGTAAACTTGAGTAACGGTGATATCAATACTAACGAACAAGTTCGTCGCTTGATCTACTCAGA TACGGAAATTAACACCAATAATGCGGAATTACAGAAAGGCATCGAGCTGCTGAATCAAGAGAATACGGGTTCGATCTCTG GTGATAAAGGTGGTACTCATGTATGGTGGGACAAAGCTGGTGTAGGTAATTTCTAA
Upstream 100 bases:
>100_bases ACAGGCAATGGCTGGCAAGGTGTGGATATGTTTGCGTTGCCAACATCTCGTAGCTTTGGTTTGAATTTAAAACTTAATTT CTAAATCTTGAGTATATCTT
Downstream 100 bases:
>100_bases TCGGCATTAATAGGTCTTATTGTTAAATAATATGTAATGAAAGGGCTTCTTCGAGTTTGCGAAGAGGCCCTTCTGAATTT TGTACTACTTTAGAAGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKLNRILKYAAVSALVVSTGVMTMGCTDNFENLNTDPYEVDPDELPFSAQFKEPFSYVYAPQQNLFQYCFNLNIDLFSGY FMTPHNFNGSGNVDYALNRGFCGGMYENVYLHIFNNTRRLIASCDEQGLSDYGAMMRVVQAYAIQMLTDAYGPVAYSSVI EDPTGGASFSYDTQESVYNALFTLVDEAIAGFKGTASVADMQAFDYWCNGDIALWKKVANQLKLRLAMRIVKVNPTLAKQ KAEEAVQGGVLTSADRDILINQGLSNELTRMFEWGDCGMNASLITMLEGFKDPRLPLYVTKNQAAVTCEDGSTIEEGTKY LGVRGGCNLPSKPNQWGNFSKVICTYTTAFPVMKVAEGYFLRAEGALRGWSMGGSAKDLYEEGIRISIKNELAYKGSIAG VTSISDAEIDAYLNGTSGQIDFVDPVKAENSIKAMNTLGVKWDEGASKEEKLQRIITQKWIANFPLSCEAWAEYRRTGYP KLFPNRVNLSNGDINTNEQVRRLIYSDTEINTNNAELQKGIELLNQENTGSISGDKGGTHVWWDKAGVGNF
Sequences:
>Translated_551_residues MKLNRILKYAAVSALVVSTGVMTMGCTDNFENLNTDPYEVDPDELPFSAQFKEPFSYVYAPQQNLFQYCFNLNIDLFSGY FMTPHNFNGSGNVDYALNRGFCGGMYENVYLHIFNNTRRLIASCDEQGLSDYGAMMRVVQAYAIQMLTDAYGPVAYSSVI EDPTGGASFSYDTQESVYNALFTLVDEAIAGFKGTASVADMQAFDYWCNGDIALWKKVANQLKLRLAMRIVKVNPTLAKQ KAEEAVQGGVLTSADRDILINQGLSNELTRMFEWGDCGMNASLITMLEGFKDPRLPLYVTKNQAAVTCEDGSTIEEGTKY LGVRGGCNLPSKPNQWGNFSKVICTYTTAFPVMKVAEGYFLRAEGALRGWSMGGSAKDLYEEGIRISIKNELAYKGSIAG VTSISDAEIDAYLNGTSGQIDFVDPVKAENSIKAMNTLGVKWDEGASKEEKLQRIITQKWIANFPLSCEAWAEYRRTGYP KLFPNRVNLSNGDINTNEQVRRLIYSDTEINTNNAELQKGIELLNQENTGSISGDKGGTHVWWDKAGVGNF >Mature_551_residues MKLNRILKYAAVSALVVSTGVMTMGCTDNFENLNTDPYEVDPDELPFSAQFKEPFSYVYAPQQNLFQYCFNLNIDLFSGY FMTPHNFNGSGNVDYALNRGFCGGMYENVYLHIFNNTRRLIASCDEQGLSDYGAMMRVVQAYAIQMLTDAYGPVAYSSVI EDPTGGASFSYDTQESVYNALFTLVDEAIAGFKGTASVADMQAFDYWCNGDIALWKKVANQLKLRLAMRIVKVNPTLAKQ KAEEAVQGGVLTSADRDILINQGLSNELTRMFEWGDCGMNASLITMLEGFKDPRLPLYVTKNQAAVTCEDGSTIEEGTKY LGVRGGCNLPSKPNQWGNFSKVICTYTTAFPVMKVAEGYFLRAEGALRGWSMGGSAKDLYEEGIRISIKNELAYKGSIAG VTSISDAEIDAYLNGTSGQIDFVDPVKAENSIKAMNTLGVKWDEGASKEEKLQRIITQKWIANFPLSCEAWAEYRRTGYP KLFPNRVNLSNGDINTNEQVRRLIYSDTEINTNNAELQKGIELLNQENTGSISGDKGGTHVWWDKAGVGNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61003; Mature: 61003
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNRILKYAAVSALVVSTGVMTMGCTDNFENLNTDPYEVDPDELPFSAQFKEPFSYVYA CCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEC PQQNLFQYCFNLNIDLFSGYFMTPHNFNGSGNVDYALNRGFCGGMYENVYLHIFNNTRRL CHHHHHHHHHHCCEEHCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHH IASCDEQGLSDYGAMMRVVQAYAIQMLTDAYGPVAYSSVIEDPTGGASFSYDTQESVYNA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH LFTLVDEAIAGFKGTASVADMQAFDYWCNGDIALWKKVANQLKLRLAMRIVKVNPTLAKQ HHHHHHHHHHCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHEEEECCCHHHHH KAEEAVQGGVLTSADRDILINQGLSNELTRMFEWGDCGMNASLITMLEGFKDPRLPLYVT HHHHHHHCCEEECCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEE KNQAAVTCEDGSTIEEGTKYLGVRGGCNLPSKPNQWGNFSKVICTYTTAFPVMKVAEGYF CCCEEEEECCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCEE LRAEGALRGWSMGGSAKDLYEEGIRISIKNELAYKGSIAGVTSISDAEIDAYLNGTSGQI EEECCCCCCCCCCCCHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCCE DFVDPVKAENSIKAMNTLGVKWDEGASKEEKLQRIITQKWIANFPLSCEAWAEYRRTGYP EECCCCCCCCCHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC KLFPNRVNLSNGDINTNEQVRRLIYSDTEINTNNAELQKGIELLNQENTGSISGDKGGTH CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCE VWWDKAGVGNF EEECCCCCCCC >Mature Secondary Structure MKLNRILKYAAVSALVVSTGVMTMGCTDNFENLNTDPYEVDPDELPFSAQFKEPFSYVYA CCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEC PQQNLFQYCFNLNIDLFSGYFMTPHNFNGSGNVDYALNRGFCGGMYENVYLHIFNNTRRL CHHHHHHHHHHCCEEHCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHH IASCDEQGLSDYGAMMRVVQAYAIQMLTDAYGPVAYSSVIEDPTGGASFSYDTQESVYNA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH LFTLVDEAIAGFKGTASVADMQAFDYWCNGDIALWKKVANQLKLRLAMRIVKVNPTLAKQ HHHHHHHHHHCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHEEEECCCHHHHH KAEEAVQGGVLTSADRDILINQGLSNELTRMFEWGDCGMNASLITMLEGFKDPRLPLYVT HHHHHHHCCEEECCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEE KNQAAVTCEDGSTIEEGTKYLGVRGGCNLPSKPNQWGNFSKVICTYTTAFPVMKVAEGYF CCCEEEEECCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCEE LRAEGALRGWSMGGSAKDLYEEGIRISIKNELAYKGSIAGVTSISDAEIDAYLNGTSGQI EEECCCCCCCCCCCCHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCCE DFVDPVKAENSIKAMNTLGVKWDEGASKEEKLQRIITQKWIANFPLSCEAWAEYRRTGYP EECCCCCCCCCHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC KLFPNRVNLSNGDINTNEQVRRLIYSDTEINTNNAELQKGIELLNQENTGSISGDKGGTH CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCE VWWDKAGVGNF EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA