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The map label for this gene is rsgA

Identifier: 150009959

GI number: 150009959

Start: 4096548

End: 4097480

Strand: Direct

Name: rsgA

Synonym: BDI_3377

Alternate gene names: 150009959

Gene position: 4096548-4097480 (Clockwise)

Preceding gene: 150009958

Following gene: 150009961

Centisome position: 85.14

GC content: 45.55

Gene sequence:

>933_bases
ATGAGGGGACTGGTAATAAAAAACACAGGTAGTTGGTATACGGTCCGTACGGAAGACGGGCGAGATATAGAGAGTAAGAT
CAAGGGTAACTTTCGTCTGAAAGACATAAAGAGTACCAATCCGGTCGCGGTAGGAGACCGTGTCGTAATCGATATTAATA
AAGAAGGAACCGCTTTTATTACAGAGATCGAGGAGCGTAAGAATTATATCATCCGTCGTGCCTCTAACTTATCGAAGCAA
TCGCATATTATCGCCGCGAATTTGGATCAGGCGATGCTGATCGTTACAGTGAATTATCCTATAACAACAACGATATTTAT
CGATCGCTTCTTGGCGACAGCCGAGGCTTATCGTGTCCCCGTTAAATTAGTTTTCAATAAGATTGATCGTTATAATAATG
AGGATCAAAGGGCGTTGGAGTGTTTAATCGAGTTGTATACCTCGATTGGCTATCCCTGTTCGACGCTATGTGCCCGGACC
GAGGAAGGTTTGGATGCCTTGAAAGCGGATCTAAAAGATAAGATTACGCTTTTGTCCGGCCATTCGGGTGTCGGAAAATC
CACGATTATCAATAAACTGGTGCCGGGGGTGAATCTCCGTACCGGTGATATCTCCGAATATCATAACAAAGGTATGCATA
CGACCACCTTTTCCGAGATGATTCCTCTTCCCGGGGGAGGCTATTTGATCGATACTCCGGGTATCAAAGGATTTGGAACG
ATCGAGATGGCGGACGCTGAGATCTCCCATTATTTCCGGGAGTTGTTTAAATACTCGGAAGAATGCCGTTTCAATAACTG
CACGCACCGTCATGAACCGGGCTGCGCCGTCATTCAGGCCGTTAACGATGGGCTAATCAGCGAGTCCCGCTATAAAAGCT
ATCTAAGTATCTTGGATGATCGCATGGAAAGCAAGTACCGGGAAGAATTCTAA

Upstream 100 bases:

>100_bases
TTTAAATAATTGAAAGTTGAAACTTGAGAATTGAGAATTAAGGAACCCCATTGAGTCCTTATTCCAATTCTCAATTTTCA
ATTCTCAATTTTCAATTCTC

Downstream 100 bases:

>100_bases
CACATTATTATAACATCAAACGGCCGGCAGGCTCATACCGGTGATTTTACGGTATAGATCGAGCGCATATACATCGGTCA
TGCCGGAGATATAATCGAGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRGLVIKNTGSWYTVRTEDGRDIESKIKGNFRLKDIKSTNPVAVGDRVVIDINKEGTAFITEIEERKNYIIRRASNLSKQ
SHIIAANLDQAMLIVTVNYPITTTIFIDRFLATAEAYRVPVKLVFNKIDRYNNEDQRALECLIELYTSIGYPCSTLCART
EEGLDALKADLKDKITLLSGHSGVGKSTIINKLVPGVNLRTGDISEYHNKGMHTTTFSEMIPLPGGGYLIDTPGIKGFGT
IEMADAEISHYFRELFKYSEECRFNNCTHRHEPGCAVIQAVNDGLISESRYKSYLSILDDRMESKYREEF

Sequences:

>Translated_310_residues
MRGLVIKNTGSWYTVRTEDGRDIESKIKGNFRLKDIKSTNPVAVGDRVVIDINKEGTAFITEIEERKNYIIRRASNLSKQ
SHIIAANLDQAMLIVTVNYPITTTIFIDRFLATAEAYRVPVKLVFNKIDRYNNEDQRALECLIELYTSIGYPCSTLCART
EEGLDALKADLKDKITLLSGHSGVGKSTIINKLVPGVNLRTGDISEYHNKGMHTTTFSEMIPLPGGGYLIDTPGIKGFGT
IEMADAEISHYFRELFKYSEECRFNNCTHRHEPGCAVIQAVNDGLISESRYKSYLSILDDRMESKYREEF
>Mature_310_residues
MRGLVIKNTGSWYTVRTEDGRDIESKIKGNFRLKDIKSTNPVAVGDRVVIDINKEGTAFITEIEERKNYIIRRASNLSKQ
SHIIAANLDQAMLIVTVNYPITTTIFIDRFLATAEAYRVPVKLVFNKIDRYNNEDQRALECLIELYTSIGYPCSTLCART
EEGLDALKADLKDKITLLSGHSGVGKSTIINKLVPGVNLRTGDISEYHNKGMHTTTFSEMIPLPGGGYLIDTPGIKGFGT
IEMADAEISHYFRELFKYSEECRFNNCTHRHEPGCAVIQAVNDGLISESRYKSYLSILDDRMESKYREEF

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=316, Percent_Identity=32.2784810126582, Blast_Score=158, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_PARD8 (A6LHB6)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001304702.1
- ProteinModelPortal:   A6LHB6
- SMR:   A6LHB6
- STRING:   A6LHB6
- GeneID:   5308526
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_3377
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   TRARGVF
- ProtClustDB:   PRK00098
- BioCyc:   PDIS435591:BDI_3377-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 34998; Mature: 34998

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLVIKNTGSWYTVRTEDGRDIESKIKGNFRLKDIKSTNPVAVGDRVVIDINKEGTAFI
CCCEEEECCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCCEEECCEEEEEECCCCCEEE
TEIEERKNYIIRRASNLSKQSHIIAANLDQAMLIVTVNYPITTTIFIDRFLATAEAYRVP
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHH
VKLVFNKIDRYNNEDQRALECLIELYTSIGYPCSTLCARTEEGLDALKADLKDKITLLSG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEC
HSGVGKSTIINKLVPGVNLRTGDISEYHNKGMHTTTFSEMIPLPGGGYLIDTPGIKGFGT
CCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEHHHHHCCCCCCCEEEECCCCCCCCE
IEMADAEISHYFRELFKYSEECRFNNCTHRHEPGCAVIQAVNDGLISESRYKSYLSILDD
EEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEHHCCCCCHHHHHHHHHHHHH
RMESKYREEF
HHHHHHHHCC
>Mature Secondary Structure
MRGLVIKNTGSWYTVRTEDGRDIESKIKGNFRLKDIKSTNPVAVGDRVVIDINKEGTAFI
CCCEEEECCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCCEEECCEEEEEECCCCCEEE
TEIEERKNYIIRRASNLSKQSHIIAANLDQAMLIVTVNYPITTTIFIDRFLATAEAYRVP
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHH
VKLVFNKIDRYNNEDQRALECLIELYTSIGYPCSTLCARTEEGLDALKADLKDKITLLSG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEC
HSGVGKSTIINKLVPGVNLRTGDISEYHNKGMHTTTFSEMIPLPGGGYLIDTPGIKGFGT
CCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEHHHHHCCCCCCCEEEECCCCCCCCE
IEMADAEISHYFRELFKYSEECRFNNCTHRHEPGCAVIQAVNDGLISESRYKSYLSILDD
EEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEHHCCCCCHHHHHHHHHHHHH
RMESKYREEF
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA