| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is sacC [H]
Identifier: 150009955
GI number: 150009955
Start: 4091892
End: 4093700
Strand: Direct
Name: sacC [H]
Synonym: BDI_3373
Alternate gene names: 150009955
Gene position: 4091892-4093700 (Clockwise)
Preceding gene: 150009954
Following gene: 150009956
Centisome position: 85.05
GC content: 50.69
Gene sequence:
>1809_bases ATGAAACAACAAACAAAGAGACTTCTGAAGAGTTTATGTATGGCTGTCGGTATCATTTTATTGAGCGCGGTCGATCCGTT GGCCGGATATGCGGCAGAACGTACTATAGATATAAAGCATCTGGGCGAAGGGCAAAGCATTGTCCGTGTGGATGCGCGAG CCAAATATTTGTTGCTTCCGGTCGAGGAGTCCTCGCCGGAATCCAAGTTGTATATGATTGTCGATAATGACGTGGTACGG ACTTTCAATGTTCGTTTGGCGGTGAATAAGGTGGATTATTTCGTTCCGGTAGATCTCTCGGGGTATGCGGATAAGCATAT CTCCTTCAACTTCCAGCTTGCCCCGGAATCGGCTCTTTGCTGGAAAGAGATGAAGCTATCCGATCAGTTTGATTCGTCTA ACCGGGAGAAATTCCGTCCGGCCTATCATTTCTCGCCGGCTTGGGGATGGATGAATGATCCGAACGGCATGGTGTACAAG GATGGTGAGTATCATTTGTTCTATCAATACAATCCGTATGGCTCGATGTGGGGGAATATGCACTGGGGGCATGCGATCAG CAAGGACTTGATTCATTGGGAGCATCAACCGGTGGCGATCGCCCCGGATGCCTTGGGTACGATCTTCAGCGGTAGCTGTG TGGTGGATAAGGATAATACCGCGGGGTTTGGCGCTGGCGCTATCGTGGCTTTCTATACCTCGGCCAGCGACCGGCAAGTG CAGAGTATGGCCTATAGCTTGGACAACGGCCGAACGTTCAAGAAATATGACCGGAATCCGATCCTTACTTCTACGCAACG TGATTTCCGTGACCCGAAAGTCTTCTGGCATAAGGAATCCAATAAATGGATCATGGTACTCGCCGTAGGGCAGGAGATGC AACTCTATTCTTCTCCCAATTTGAAGGACTGGACGTATGAGAGCAGTTTCGGGGAAGGACAAGGAGCGCATGCGGGCGTT TGGGAATGCCCGGACTTGATCGAGCTTCCGGTGAAGGGCACGGAATTGAAGAAGTGGGTCTTGATCTGTAATATCAACCC CGGTGGTCCGTTTGGCGGCTCCGCTACCCAATATTTCGTAGGTGCGTTCGATGGGAAACAGTTCGTGAATGAATCCCCGG CCTTGACCAAATGGATGGATTACGGCAAGGATCATTACGCTACGGTAACTTGGAGTAACGCCCCGGAGGACCGGAAGATC GCCTTGGCTTGGATGAGCAATTGGGAATACGCGAATAACGTGCCGACCTTGCAATACCGGAGTGCGAATTCGGTTCCTCG CGACTTGGTTCTTTATACGAAAAACGGGCAGACGTACTTGAGCAGCACCCCGTCTCCCGAGGTGTTGAAGTTGAGAGGGA AAGCCCAGAAGAAAGGTTCCTTCAAGGTGGACCGCTCCCATGAGGTCAATCCGGTACTTCCCGATCCGACGGGAACCTAT GAGATCGAGATCAAGTTTAAGAACAACGGGGCCGATATCATGAGCTTCCAGCTGTTTAACTCGAAAGGCGAGGAGGTGGA GATGCGTTATAATCTTCTGGATAATACGTTCACGATGGATCGCCGTAACAGCGGGATCACGGATTTCAGCAAGACATTCG CCACGGCTACCTCGGCCCCGATCTCCGCCGCTAAGGAATATACCTTGCGTTTGCTGGTAGATAAATCCAGCATAGAGGCT TTCGACGGGAATGGGGAGTTTGTCATGACCAACCTAGTCTTCCCGGAAGAACCGTATAATCGCATTAGCTTTCATGCCAA GGGAGGAGCGTTCACGGTTACGTCATTAACCATTTATCCCTTCAAATAA
Upstream 100 bases:
>100_bases ATATCTCCTCACCTTTAAGGGATAAGTGTTTTTCTATCCGGAAGAATCCTATTAATTTTGGCGGAGAATCAAACAATATT ATCCTTTAATCCGTTCGTTT
Downstream 100 bases:
>100_bases TTAAAAACAAAATATATCATGGAAAAGAGTAAACCTGTAGTAGTAGGCATTGGTGAATTATTGTGGGATGTCTTCCCGGA CGTGAAGAAAGCCGGTGGAG
Product: levanase
Products: NA
Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MKQQTKRLLKSLCMAVGIILLSAVDPLAGYAAERTIDIKHLGEGQSIVRVDARAKYLLLPVEESSPESKLYMIVDNDVVR TFNVRLAVNKVDYFVPVDLSGYADKHISFNFQLAPESALCWKEMKLSDQFDSSNREKFRPAYHFSPAWGWMNDPNGMVYK DGEYHLFYQYNPYGSMWGNMHWGHAISKDLIHWEHQPVAIAPDALGTIFSGSCVVDKDNTAGFGAGAIVAFYTSASDRQV QSMAYSLDNGRTFKKYDRNPILTSTQRDFRDPKVFWHKESNKWIMVLAVGQEMQLYSSPNLKDWTYESSFGEGQGAHAGV WECPDLIELPVKGTELKKWVLICNINPGGPFGGSATQYFVGAFDGKQFVNESPALTKWMDYGKDHYATVTWSNAPEDRKI ALAWMSNWEYANNVPTLQYRSANSVPRDLVLYTKNGQTYLSSTPSPEVLKLRGKAQKKGSFKVDRSHEVNPVLPDPTGTY EIEIKFKNNGADIMSFQLFNSKGEEVEMRYNLLDNTFTMDRRNSGITDFSKTFATATSAPISAAKEYTLRLLVDKSSIEA FDGNGEFVMTNLVFPEEPYNRISFHAKGGAFTVTSLTIYPFK
Sequences:
>Translated_602_residues MKQQTKRLLKSLCMAVGIILLSAVDPLAGYAAERTIDIKHLGEGQSIVRVDARAKYLLLPVEESSPESKLYMIVDNDVVR TFNVRLAVNKVDYFVPVDLSGYADKHISFNFQLAPESALCWKEMKLSDQFDSSNREKFRPAYHFSPAWGWMNDPNGMVYK DGEYHLFYQYNPYGSMWGNMHWGHAISKDLIHWEHQPVAIAPDALGTIFSGSCVVDKDNTAGFGAGAIVAFYTSASDRQV QSMAYSLDNGRTFKKYDRNPILTSTQRDFRDPKVFWHKESNKWIMVLAVGQEMQLYSSPNLKDWTYESSFGEGQGAHAGV WECPDLIELPVKGTELKKWVLICNINPGGPFGGSATQYFVGAFDGKQFVNESPALTKWMDYGKDHYATVTWSNAPEDRKI ALAWMSNWEYANNVPTLQYRSANSVPRDLVLYTKNGQTYLSSTPSPEVLKLRGKAQKKGSFKVDRSHEVNPVLPDPTGTY EIEIKFKNNGADIMSFQLFNSKGEEVEMRYNLLDNTFTMDRRNSGITDFSKTFATATSAPISAAKEYTLRLLVDKSSIEA FDGNGEFVMTNLVFPEEPYNRISFHAKGGAFTVTSLTIYPFK >Mature_602_residues MKQQTKRLLKSLCMAVGIILLSAVDPLAGYAAERTIDIKHLGEGQSIVRVDARAKYLLLPVEESSPESKLYMIVDNDVVR TFNVRLAVNKVDYFVPVDLSGYADKHISFNFQLAPESALCWKEMKLSDQFDSSNREKFRPAYHFSPAWGWMNDPNGMVYK DGEYHLFYQYNPYGSMWGNMHWGHAISKDLIHWEHQPVAIAPDALGTIFSGSCVVDKDNTAGFGAGAIVAFYTSASDRQV QSMAYSLDNGRTFKKYDRNPILTSTQRDFRDPKVFWHKESNKWIMVLAVGQEMQLYSSPNLKDWTYESSFGEGQGAHAGV WECPDLIELPVKGTELKKWVLICNINPGGPFGGSATQYFVGAFDGKQFVNESPALTKWMDYGKDHYATVTWSNAPEDRKI ALAWMSNWEYANNVPTLQYRSANSVPRDLVLYTKNGQTYLSSTPSPEVLKLRGKAQKKGSFKVDRSHEVNPVLPDPTGTY EIEIKFKNNGADIMSFQLFNSKGEEVEMRYNLLDNTFTMDRRNSGITDFSKTFATATSAPISAAKEYTLRLLVDKSSIEA FDGNGEFVMTNLVFPEEPYNRISFHAKGGAFTVTSLTIYPFK
Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=485, Percent_Identity=36.9072164948454, Blast_Score=273, Evalue=5e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR010496 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR011040 [H]
Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.80 [H]
Molecular weight: Translated: 67904; Mature: 67904
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQTKRLLKSLCMAVGIILLSAVDPLAGYAAERTIDIKHLGEGQSIVRVDARAKYLLLP CCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHEEEEEEECCCCCEEEEEECCCEEEEEE VEESSPESKLYMIVDNDVVRTFNVRLAVNKVDYFVPVDLSGYADKHISFNFQLAPESALC ECCCCCCCEEEEEEECCEEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCHHHH WKEMKLSDQFDSSNREKFRPAYHFSPAWGWMNDPNGMVYKDGEYHLFYQYNPYGSMWGNM HHHHCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCC HWGHAISKDLIHWEHQPVAIAPDALGTIFSGSCVVDKDNTAGFGAGAIVAFYTSASDRQV CCCHHHHHHHHHCCCCCEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCHHH QSMAYSLDNGRTFKKYDRNPILTSTQRDFRDPKVFWHKESNKWIMVLAVGQEMQLYSSPN HHHHEECCCCCEEHHCCCCCCEECCHHHCCCCEEEEEECCCCEEEEEEECCCEEEECCCC LKDWTYESSFGEGQGAHAGVWECPDLIELPVKGTELKKWVLICNINPGGPFGGSATQYFV CCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEE GAFDGKQFVNESPALTKWMDYGKDHYATVTWSNAPEDRKIALAWMSNWEYANNVPTLQYR EECCCHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEC SANSVPRDLVLYTKNGQTYLSSTPSPEVLKLRGKAQKKGSFKVDRSHEVNPVLPDPTGTY CCCCCCCEEEEEEECCCEEECCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCE EIEIKFKNNGADIMSFQLFNSKGEEVEMRYNLLDNTFTMDRRNSGITDFSKTFATATSAP EEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCC ISAAKEYTLRLLVDKSSIEAFDGNGEFVMTNLVFPEEPYNRISFHAKGGAFTVTSLTIYP CHHCCCEEEEEEEECCCCEEECCCCCEEEEEEECCCCCCCEEEEEECCCEEEEEEEEEEE FK CC >Mature Secondary Structure MKQQTKRLLKSLCMAVGIILLSAVDPLAGYAAERTIDIKHLGEGQSIVRVDARAKYLLLP CCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHEEEEEEECCCCCEEEEEECCCEEEEEE VEESSPESKLYMIVDNDVVRTFNVRLAVNKVDYFVPVDLSGYADKHISFNFQLAPESALC ECCCCCCCEEEEEEECCEEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCHHHH WKEMKLSDQFDSSNREKFRPAYHFSPAWGWMNDPNGMVYKDGEYHLFYQYNPYGSMWGNM HHHHCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCC HWGHAISKDLIHWEHQPVAIAPDALGTIFSGSCVVDKDNTAGFGAGAIVAFYTSASDRQV CCCHHHHHHHHHCCCCCEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCHHH QSMAYSLDNGRTFKKYDRNPILTSTQRDFRDPKVFWHKESNKWIMVLAVGQEMQLYSSPN HHHHEECCCCCEEHHCCCCCCEECCHHHCCCCEEEEEECCCCEEEEEEECCCEEEECCCC LKDWTYESSFGEGQGAHAGVWECPDLIELPVKGTELKKWVLICNINPGGPFGGSATQYFV CCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEE GAFDGKQFVNESPALTKWMDYGKDHYATVTWSNAPEDRKIALAWMSNWEYANNVPTLQYR EECCCHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEC SANSVPRDLVLYTKNGQTYLSSTPSPEVLKLRGKAQKKGSFKVDRSHEVNPVLPDPTGTY CCCCCCCEEEEEEECCCEEECCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCE EIEIKFKNNGADIMSFQLFNSKGEEVEMRYNLLDNTFTMDRRNSGITDFSKTFATATSAP EEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCC ISAAKEYTLRLLVDKSSIEAFDGNGEFVMTNLVFPEEPYNRISFHAKGGAFTVTSLTIYP CHHCCCEEEEEEEECCCCEEECCCCCEEEEEEECCCCCCCEEEEEECCCEEEEEEEEEEE FK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]