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The map label for this gene is ybjJ [C]

Identifier: 150009944

GI number: 150009944

Start: 4074579

End: 4075817

Strand: Direct

Name: ybjJ [C]

Synonym: BDI_3362

Alternate gene names: 150009944

Gene position: 4074579-4075817 (Clockwise)

Preceding gene: 150009943

Following gene: 150009946

Centisome position: 84.69

GC content: 45.28

Gene sequence:

>1239_bases
ATGAATGAAAAAATGAATGCTACATTGGGCAACGCTTTTCCCAAGGAACGGATTCGTTATGCGATGCTTTCTTTCTTTTT
AGCGCAAGGTCTTTGTTTCTCTAGTTGGGCTAGCCGTATTCCGGACGTGAAGGATATTTTTGAGGTGAATTACGCTTTCT
ATTGGGGCTTGGTCTTGTTCCTGATCCCGGTAGGTAAGTTTGTGGCGATACCGTTAGCGGGTTATTTGGTGTCGAAGTTG
GGGAGTCGTATTATGGCGCAGGTCAGTGTGTTGGGGTATGCCTTGGCCTTATTCGCGATAGGTACGGCACATAATATTTA
TCTGCTGGGTGTTTATTTGTTCTGTTTTGGGGTGTTCTGGAATCTTTGCGATATATCCTTGAATACGCAAGGAATTGGTA
TCGAGCGACTCTATGGGCGTACGATTATGGCCTCATTTCATGGAGGTTGGAGTCTGGCGGCTTGTTTAGGGGCTTTGATC
GGGTTTATCATGATCGTATCCGGTGTTACTCCGTTCTGGCATTTTACGTTGATTGCATTATTGATTGGAGTGACTGTTTT
GGTAAGCCGGAAGTATTTGCAGGAAGACGTGGCGGTTGAGTCACCGGAGGAAGAGAAGGAAGCGGAGAAGAAAGAAGCTC
CGGCATTGTTGAGCTTTATCCGTAAGCCGGAAATGCTGTTGATCCAGTTAGGTATCGTCGGGCTGTTTGCCTTGGTGGTG
GAAAGCGCGATGTTTGATTGGAGTGGACTTTACTTCGAATCGGTATTGCAGGTTCCTAAGTCCTTACAGATTGGTTTCTT
GGTGTTCATGGTGATGATGACGGTAGGCCGTTTTCTTACGAACTCCGCCTATAGTGTTTTAGGAAAGCAGAAGGTGTTGC
AATTAGCGGGTTTCTTTATTTTAGCAGGTTTTTTTATCTCAGCCATGTTGGGTGGAATGTTCGAATCGATGACGGTAAAG
GTGATCGTGAATTCCTTAGGCTTTATGTTGGTAGGCTTGGGCATCTCGTGTATGGTGCCTACTATTTATAGCTTAGTGGG
CGCTAAATCGAGAACTCCGGTGGGAATTGCCTTGACGATCCTTTCCAGTATCAGCTTTATCGGCTCGTTGATCGCACCTT
TGTTGATCGGAGCGATCTCGCAGGCTTTCAATATGAAATACGCTTATATCGTGGTCGGCTTGTTAGGGCTTTGTATCTTG
CTAATGACTACATTCTGCAAAGCATTCAAGAATAATTAA

Upstream 100 bases:

>100_bases
CTTAGGGGATTAGGATATTAGGATATATTTGATAGCTTTGCGAAGAAATGGGGGGCGTGCCCCTTTCTCGAATAAATGAT
AACAATAAAAGTAAATGATA

Downstream 100 bases:

>100_bases
AGATAGAGAATTGAGAATTGAAAATTAGGAGAGAGCGAATAATTTTCAATTCTCAATTTTCAACTACTCAGGCATTCGTT
GTTCCGCTGTCTCTAAGCAT

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNEKMNATLGNAFPKERIRYAMLSFFLAQGLCFSSWASRIPDVKDIFEVNYAFYWGLVLFLIPVGKFVAIPLAGYLVSKL
GSRIMAQVSVLGYALALFAIGTAHNIYLLGVYLFCFGVFWNLCDISLNTQGIGIERLYGRTIMASFHGGWSLAACLGALI
GFIMIVSGVTPFWHFTLIALLIGVTVLVSRKYLQEDVAVESPEEEKEAEKKEAPALLSFIRKPEMLLIQLGIVGLFALVV
ESAMFDWSGLYFESVLQVPKSLQIGFLVFMVMMTVGRFLTNSAYSVLGKQKVLQLAGFFILAGFFISAMLGGMFESMTVK
VIVNSLGFMLVGLGISCMVPTIYSLVGAKSRTPVGIALTILSSISFIGSLIAPLLIGAISQAFNMKYAYIVVGLLGLCIL
LMTTFCKAFKNN

Sequences:

>Translated_412_residues
MNEKMNATLGNAFPKERIRYAMLSFFLAQGLCFSSWASRIPDVKDIFEVNYAFYWGLVLFLIPVGKFVAIPLAGYLVSKL
GSRIMAQVSVLGYALALFAIGTAHNIYLLGVYLFCFGVFWNLCDISLNTQGIGIERLYGRTIMASFHGGWSLAACLGALI
GFIMIVSGVTPFWHFTLIALLIGVTVLVSRKYLQEDVAVESPEEEKEAEKKEAPALLSFIRKPEMLLIQLGIVGLFALVV
ESAMFDWSGLYFESVLQVPKSLQIGFLVFMVMMTVGRFLTNSAYSVLGKQKVLQLAGFFILAGFFISAMLGGMFESMTVK
VIVNSLGFMLVGLGISCMVPTIYSLVGAKSRTPVGIALTILSSISFIGSLIAPLLIGAISQAFNMKYAYIVVGLLGLCIL
LMTTFCKAFKNN
>Mature_412_residues
MNEKMNATLGNAFPKERIRYAMLSFFLAQGLCFSSWASRIPDVKDIFEVNYAFYWGLVLFLIPVGKFVAIPLAGYLVSKL
GSRIMAQVSVLGYALALFAIGTAHNIYLLGVYLFCFGVFWNLCDISLNTQGIGIERLYGRTIMASFHGGWSLAACLGALI
GFIMIVSGVTPFWHFTLIALLIGVTVLVSRKYLQEDVAVESPEEEKEAEKKEAPALLSFIRKPEMLLIQLGIVGLFALVV
ESAMFDWSGLYFESVLQVPKSLQIGFLVFMVMMTVGRFLTNSAYSVLGKQKVLQLAGFFILAGFFISAMLGGMFESMTVK
VIVNSLGFMLVGLGISCMVPTIYSLVGAKSRTPVGIALTILSSISFIGSLIAPLLIGAISQAFNMKYAYIVVGLLGLCIL
LMTTFCKAFKNN

Specific function: Could be involved in a transport system [H]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti mosC [H]

Homologues:

Organism=Escherichia coli, GI1787068, Length=393, Percent_Identity=25.1908396946565, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45063; Mature: 45063

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKMNATLGNAFPKERIRYAMLSFFLAQGLCFSSWASRIPDVKDIFEVNYAFYWGLVLF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LIPVGKFVAIPLAGYLVSKLGSRIMAQVSVLGYALALFAIGTAHNIYLLGVYLFCFGVFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NLCDISLNTQGIGIERLYGRTIMASFHGGWSLAACLGALIGFIMIVSGVTPFWHFTLIAL
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIGVTVLVSRKYLQEDVAVESPEEEKEAEKKEAPALLSFIRKPEMLLIQLGIVGLFALVV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ESAMFDWSGLYFESVLQVPKSLQIGFLVFMVMMTVGRFLTNSAYSVLGKQKVLQLAGFFI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGFFISAMLGGMFESMTVKVIVNSLGFMLVGLGISCMVPTIYSLVGAKSRTPVGIALTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LSSISFIGSLIAPLLIGAISQAFNMKYAYIVVGLLGLCILLMTTFCKAFKNN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEKMNATLGNAFPKERIRYAMLSFFLAQGLCFSSWASRIPDVKDIFEVNYAFYWGLVLF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LIPVGKFVAIPLAGYLVSKLGSRIMAQVSVLGYALALFAIGTAHNIYLLGVYLFCFGVFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NLCDISLNTQGIGIERLYGRTIMASFHGGWSLAACLGALIGFIMIVSGVTPFWHFTLIAL
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIGVTVLVSRKYLQEDVAVESPEEEKEAEKKEAPALLSFIRKPEMLLIQLGIVGLFALVV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ESAMFDWSGLYFESVLQVPKSLQIGFLVFMVMMTVGRFLTNSAYSVLGKQKVLQLAGFFI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGFFISAMLGGMFESMTVKVIVNSLGFMLVGLGISCMVPTIYSLVGAKSRTPVGIALTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LSSISFIGSLIAPLLIGAISQAFNMKYAYIVVGLLGLCILLMTTFCKAFKNN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]