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The map label for this gene is yrkO [H]

Identifier: 150009903

GI number: 150009903

Start: 4017412

End: 4018599

Strand: Direct

Name: yrkO [H]

Synonym: BDI_3320

Alternate gene names: 150009903

Gene position: 4017412-4018599 (Clockwise)

Preceding gene: 150009902

Following gene: 150009916

Centisome position: 83.5

GC content: 47.31

Gene sequence:

>1188_bases
ATGCAACAAACGACAATCTCTAAGCCGCCTCGTGTAGAGGTGGTGGATGCGCTACGTGGATTCGCTGTCTTGGCCATCTT
ATTGGTGCATCATGTGGAACATTTTATCTATCCGGTCTATCCGGACCCGGTTACGCTTCCGGGATGGTTGAACGTATTGA
ATGAAGGTGTATTCACGGTGGTGTTCGGCTTGTTCGCCGGGAAATCATATTCCATCTTTGCCTTGTTATTCGGCTTTACC
TTTTATATACAGTATTCGAACCAGCAGGCGAAGGGGAAGGACTTCGGTTACCGTTTTCTTTGGCGGATGTTGTTGCTGAC
GCTCTTTGCTACGTTGAACGCCGCTTTCTATCCGGCAGGCGATGTGCTGTTGCTGTATGCGATCGTGGGCGTTGTTTTGT
TTATCGTGCGTAAATGGAGCGATAAGGCTGTCTTGATAACGGCTGTTATCTTTTTATTACAGCCGGTGGAGTGGTATCAT
TACATCGCTAGCCTGTTTAATCCGGATTATCAATTACCTAATTTAGGGGTAGGAGCGATGTACGCTGAAATGGCGGAGCA
TACGAAGCGGGGCGATTTATGGAATTTCATCTGGCAGAACGTGACGTTGGGACAAAAGGCTAGTTTACTCTGGGCCGTTG
GTGCCGGCCGGTATGTACAGACCTGCGGGTTGTTTATGCTGGGAATGTTGATCGGGCGCAGGAAGCTATTTATCTCCTCG
GAGGAGAATTCCCGTTTTTGGATAAAGACTTTGATAATTACCGCAATTGCTTTCGGTCCTTTATACCAACTGAAAGTATT
GTTGATGGATACGGCGGATAGCGCTATCGTGCGTCAGACAGCCGGGGTCGTCCTTGATATGTGGCAGAAATTCGCTTTCA
CGTTTGTATTGGTCTCCTCTTTCGTGTTACTGTACCAATGGGAGGGCTTTAGGCGTTTCACTTCCGTCTTGCGCTCGTAT
GGGAAGATGAGTTTGACGAATTACGTGTCGCAATCCTTTTTCGGTGCGTTGATCTATTTCCCGATCGGCTTGAATTTGGC
TCCTTACTGCGGTTATACGGTCAGTATGTTCATCGGTATCGTCTTTTTCTTCTTGCAAGTACGCTTCTGTAAATGGTGGG
CAGAAAGACATAAACATGGGCCGTTGGAAGGTATTTGGCATAAATGGACATGGGTAGGTTATAAGTAG

Upstream 100 bases:

>100_bases
CCCGTCGTCCGGAACTTTATGCGGATATCATCGGTCAACCGCATGAGTCCAATCAAAAGGTAGCATGGTTAACAGAAACA
ACAAATAACAAATAAATAAT

Downstream 100 bases:

>100_bases
AAATATGTAAGAGAACCTAATCTATGGCAAGGCAGAGAGACGAGGTTCTCTTTCCTATCATAGATTAGGCTCTCTTAGCT
ATCATAGATTCTACTCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQQTTISKPPRVEVVDALRGFAVLAILLVHHVEHFIYPVYPDPVTLPGWLNVLNEGVFTVVFGLFAGKSYSIFALLFGFT
FYIQYSNQQAKGKDFGYRFLWRMLLLTLFATLNAAFYPAGDVLLLYAIVGVVLFIVRKWSDKAVLITAVIFLLQPVEWYH
YIASLFNPDYQLPNLGVGAMYAEMAEHTKRGDLWNFIWQNVTLGQKASLLWAVGAGRYVQTCGLFMLGMLIGRRKLFISS
EENSRFWIKTLIITAIAFGPLYQLKVLLMDTADSAIVRQTAGVVLDMWQKFAFTFVLVSSFVLLYQWEGFRRFTSVLRSY
GKMSLTNYVSQSFFGALIYFPIGLNLAPYCGYTVSMFIGIVFFFLQVRFCKWWAERHKHGPLEGIWHKWTWVGYK

Sequences:

>Translated_395_residues
MQQTTISKPPRVEVVDALRGFAVLAILLVHHVEHFIYPVYPDPVTLPGWLNVLNEGVFTVVFGLFAGKSYSIFALLFGFT
FYIQYSNQQAKGKDFGYRFLWRMLLLTLFATLNAAFYPAGDVLLLYAIVGVVLFIVRKWSDKAVLITAVIFLLQPVEWYH
YIASLFNPDYQLPNLGVGAMYAEMAEHTKRGDLWNFIWQNVTLGQKASLLWAVGAGRYVQTCGLFMLGMLIGRRKLFISS
EENSRFWIKTLIITAIAFGPLYQLKVLLMDTADSAIVRQTAGVVLDMWQKFAFTFVLVSSFVLLYQWEGFRRFTSVLRSY
GKMSLTNYVSQSFFGALIYFPIGLNLAPYCGYTVSMFIGIVFFFLQVRFCKWWAERHKHGPLEGIWHKWTWVGYK
>Mature_395_residues
MQQTTISKPPRVEVVDALRGFAVLAILLVHHVEHFIYPVYPDPVTLPGWLNVLNEGVFTVVFGLFAGKSYSIFALLFGFT
FYIQYSNQQAKGKDFGYRFLWRMLLLTLFATLNAAFYPAGDVLLLYAIVGVVLFIVRKWSDKAVLITAVIFLLQPVEWYH
YIASLFNPDYQLPNLGVGAMYAEMAEHTKRGDLWNFIWQNVTLGQKASLLWAVGAGRYVQTCGLFMLGMLIGRRKLFISS
EENSRFWIKTLIITAIAFGPLYQLKVLLMDTADSAIVRQTAGVVLDMWQKFAFTFVLVSSFVLLYQWEGFRRFTSVLRSY
GKMSLTNYVSQSFFGALIYFPIGLNLAPYCGYTVSMFIGIVFFFLQVRFCKWWAERHKHGPLEGIWHKWTWVGYK

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 45400; Mature: 45400

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEECCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]