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The map label for this gene is yedU [C]

Identifier: 150009859

GI number: 150009859

Start: 3957737

End: 3958426

Strand: Direct

Name: yedU [C]

Synonym: BDI_3275

Alternate gene names: 150009859

Gene position: 3957737-3958426 (Clockwise)

Preceding gene: 150009857

Following gene: 150009860

Centisome position: 82.26

GC content: 40.43

Gene sequence:

>690_bases
ATGAAGATTTTAATAATAGTTACTAGCACAGGGACTTTTGCCAATGGGAAACTCGCGACCGGATTATGGCTTAGTGAGTT
TACTCATATCTATCATAGTGCAAAAGAAAGCGGCTATGACATAACGGTAGCCAATCCGAAAGGAGGTTATACTCCCATTG
ATCCCGAAAGTTTAAAACCAATTTTTTTAGATGAAATGTCCGAAAAGTATTGGGAAAAGCCAGAATTCAAAAAGCTGTTG
GATCATGCAAACAGTTTGGATAACCTGTTGGAACAACAGTTTGATTGTGTCTATTTAGCCGGCGGACACGGTGCGATGTA
TGACTTTCCTGACAATGAAGCTTTAAAGACTATCGTAAGGAAACAGGATGAAAGTGGGAGGATAGTGTCGGCCATCTGCC
ACGGGGTCAGTGGGTTGTTGAATGTCAAACTATCCAATGGCGAATATATGATTAAAGGCAAAAAGCTGACGGGATTCAGT
TGGTTTGAGGAAAGTCTTGCCAGAAGAAAAGAAGACGTGCCTTTTGATCTTGAAGCGTTGTTGAAAGAGAGAGGAGCGGA
TTATGAAAAAGCATTGATACCTATGACTTCAAAAGTAGTTGTAGATAATAATCTGATTACTGGGCAGGACCCGTTCAGTT
CTAAAGAAATGGCGAAGGTCGTTATGCGGCAATTAAATAAAGCACAATAA

Upstream 100 bases:

>100_bases
TTCATATTTTCGGATTATGTTAAAGATTCCATATTCTGAAAAACAATCTATCCATGTGTATGTTTTCTTTTAAAGAATAT
GAATCAATAATTTGATTATC

Downstream 100 bases:

>100_bases
TAAATGGCTGAAGTAATCAGCTGGGAATAAATGTTTAATTCAAATCAGTATCATTATGAATTTAGATGAAGTCCTTCATC
ATCGTCGTTCTGTACGGGTG

Product: ThiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator; Chaperone HchA; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Transcriptional Regulator Fis Family; Intracellular Protease Amidase; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein HchA; ThiJ/PfpI Protein; Regulatory Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; ThiJ Protein; NonF Protein

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKILIIVTSTGTFANGKLATGLWLSEFTHIYHSAKESGYDITVANPKGGYTPIDPESLKPIFLDEMSEKYWEKPEFKKLL
DHANSLDNLLEQQFDCVYLAGGHGAMYDFPDNEALKTIVRKQDESGRIVSAICHGVSGLLNVKLSNGEYMIKGKKLTGFS
WFEESLARRKEDVPFDLEALLKERGADYEKALIPMTSKVVVDNNLITGQDPFSSKEMAKVVMRQLNKAQ

Sequences:

>Translated_229_residues
MKILIIVTSTGTFANGKLATGLWLSEFTHIYHSAKESGYDITVANPKGGYTPIDPESLKPIFLDEMSEKYWEKPEFKKLL
DHANSLDNLLEQQFDCVYLAGGHGAMYDFPDNEALKTIVRKQDESGRIVSAICHGVSGLLNVKLSNGEYMIKGKKLTGFS
WFEESLARRKEDVPFDLEALLKERGADYEKALIPMTSKVVVDNNLITGQDPFSSKEMAKVVMRQLNKAQ
>Mature_229_residues
MKILIIVTSTGTFANGKLATGLWLSEFTHIYHSAKESGYDITVANPKGGYTPIDPESLKPIFLDEMSEKYWEKPEFKKLL
DHANSLDNLLEQQFDCVYLAGGHGAMYDFPDNEALKTIVRKQDESGRIVSAICHGVSGLLNVKLSNGEYMIKGKKLTGFS
WFEESLARRKEDVPFDLEALLKERGADYEKALIPMTSKVVVDNNLITGQDPFSSKEMAKVVMRQLNKAQ

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=227, Percent_Identity=25.5506607929515, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6324967, Length=236, Percent_Identity=25, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324975, Length=236, Percent_Identity=25, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323984, Length=236, Percent_Identity=25, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25658; Mature: 25658

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIIVTSTGTFANGKLATGLWLSEFTHIYHSAKESGYDITVANPKGGYTPIDPESLKP
CEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCC
IFLDEMSEKYWEKPEFKKLLDHANSLDNLLEQQFDCVYLAGGHGAMYDFPDNEALKTIVR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
KQDESGRIVSAICHGVSGLLNVKLSNGEYMIKGKKLTGFSWFEESLARRKEDVPFDLEAL
CCCCCCHHHHHHHHHHHHEEEEEECCCEEEEECCEECCHHHHHHHHHHHHCCCCCCHHHH
LKERGADYEKALIPMTSKVVVDNNLITGQDPFSSKEMAKVVMRQLNKAQ
HHHHCCCHHHHHCCCCCEEEEECCEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILIIVTSTGTFANGKLATGLWLSEFTHIYHSAKESGYDITVANPKGGYTPIDPESLKP
CEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCC
IFLDEMSEKYWEKPEFKKLLDHANSLDNLLEQQFDCVYLAGGHGAMYDFPDNEALKTIVR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
KQDESGRIVSAICHGVSGLLNVKLSNGEYMIKGKKLTGFSWFEESLARRKEDVPFDLEAL
CCCCCCHHHHHHHHHHHHEEEEEECCCEEEEECCEECCHHHHHHHHHHHHCCCCCCHHHH
LKERGADYEKALIPMTSKVVVDNNLITGQDPFSSKEMAKVVMRQLNKAQ
HHHHCCCHHHHHCCCCCEEEEECCEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA