| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150009856
Identifier: 150009856
GI number: 150009856
Start: 3955852
End: 3956412
Strand: Direct
Name: 150009856
Synonym: BDI_3272
Alternate gene names: NA
Gene position: 3955852-3956412 (Clockwise)
Preceding gene: 150009854
Following gene: 150009857
Centisome position: 82.22
GC content: 45.1
Gene sequence:
>561_bases ATGAATAAACTATATTTACTGTTAGTATTTCTTTTGCCAACTTTTATAGATATTCAAGGACAGGTCGTGGCCGTGAAGAC CAATGTGCTTTATGACGCGATCACTACGCCGAACATAGGGGCGGAGGTCGCTTTCAACAAGCATTGGTCCGTTGAGGCAT CGGGGTATTATAACGGTTGGACATTCTCGAGCGATAAGTCATTTAAGCATTGGATGATACAGCCCGAGGCGCGTTACTGG ATACACGAGCGTTTCAACGGACATTTCTTCGGGGTTCATGCCCAGTATATAGATTACGATTTCGCCGGTTTGAAGCTCCT GTATGGGATGGAGAAAAAGAATAGTTATAACGGTAACGCTTATGGCGGCGGTATCTCTTATGGTTATCAGTTATACGTGT CGCCCCGTTGGAACGTGGAGTTCACGGCGGGTTTCGGATACTTGCATTTCGAATATGATAAGTACGCTTTTCCTAGAGGA GATGCGCCTATCGGCAAGTTCCGCAACGAGTATTGGGGATTAACAAAGGCGGGTATCAGTATCGTTTACATCATCAAATA A
Upstream 100 bases:
>100_bases GTGGATATTATATAAGTTAACGTACGAATGAACTGATAAATATTATCTATATTTGTACGGTTTTGTCTCTTAAATAAACA AACCTAATGAACCGGGAGAT
Downstream 100 bases:
>100_bases AGAGATAAATCTATGAAGACATTCATTTATATATGCTTGTATATATGCTTGCTTGTGATCGGCCTTGTTCTTCCGGCAGG AGCGCAGGTACCTATACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNKLYLLLVFLLPTFIDIQGQVVAVKTNVLYDAITTPNIGAEVAFNKHWSVEASGYYNGWTFSSDKSFKHWMIQPEARYW IHERFNGHFFGVHAQYIDYDFAGLKLLYGMEKKNSYNGNAYGGGISYGYQLYVSPRWNVEFTAGFGYLHFEYDKYAFPRG DAPIGKFRNEYWGLTKAGISIVYIIK
Sequences:
>Translated_186_residues MNKLYLLLVFLLPTFIDIQGQVVAVKTNVLYDAITTPNIGAEVAFNKHWSVEASGYYNGWTFSSDKSFKHWMIQPEARYW IHERFNGHFFGVHAQYIDYDFAGLKLLYGMEKKNSYNGNAYGGGISYGYQLYVSPRWNVEFTAGFGYLHFEYDKYAFPRG DAPIGKFRNEYWGLTKAGISIVYIIK >Mature_186_residues MNKLYLLLVFLLPTFIDIQGQVVAVKTNVLYDAITTPNIGAEVAFNKHWSVEASGYYNGWTFSSDKSFKHWMIQPEARYW IHERFNGHFFGVHAQYIDYDFAGLKLLYGMEKKNSYNGNAYGGGISYGYQLYVSPRWNVEFTAGFGYLHFEYDKYAFPRG DAPIGKFRNEYWGLTKAGISIVYIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21518; Mature: 21518
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLYLLLVFLLPTFIDIQGQVVAVKTNVLYDAITTPNIGAEVAFNKHWSVEASGYYNGW CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCEEEEECCCEEEEECCEECCE TFSSDKSFKHWMIQPEARYWIHERFNGHFFGVHAQYIDYDFAGLKLLYGMEKKNSYNGNA EECCCCCCEEEEECCCHHEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCC YGGGISYGYQLYVSPRWNVEFTAGFGYLHFEYDKYAFPRGDAPIGKFRNEYWGLTKAGIS CCCCCCCCEEEEECCCCCEEEEECCEEEEEEECCEECCCCCCCHHHHHHHHCCEECCCEE IVYIIK EEEEEC >Mature Secondary Structure MNKLYLLLVFLLPTFIDIQGQVVAVKTNVLYDAITTPNIGAEVAFNKHWSVEASGYYNGW CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCEEEEECCCEEEEECCEECCE TFSSDKSFKHWMIQPEARYWIHERFNGHFFGVHAQYIDYDFAGLKLLYGMEKKNSYNGNA EECCCCCCEEEEECCCHHEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCC YGGGISYGYQLYVSPRWNVEFTAGFGYLHFEYDKYAFPRGDAPIGKFRNEYWGLTKAGIS CCCCCCCCEEEEECCCCCEEEEECCEEEEEEECCEECCCCCCCHHHHHHHHCCEECCCEE IVYIIK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA