| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009816
Identifier: 150009816
GI number: 150009816
Start: 3914331
End: 3915236
Strand: Reverse
Name: 150009816
Synonym: BDI_3232
Alternate gene names: NA
Gene position: 3915236-3914331 (Counterclockwise)
Preceding gene: 150009817
Following gene: 150009815
Centisome position: 81.37
GC content: 41.06
Gene sequence:
>906_bases ATGACTGTATCCGTATTTATCTGTACATATAATAGAGGGAATCTAATAGACGGTACACTATGCGCTATAATTGAAAGACA GACGAGAAAACCTGACGAGATTGTAGTAGTAAATGGAGGTGGTATTAATGACTGTCACGCCACCATAGTGAAGTGGCAGA AGTTGTTTCCTACACTTAGAGAAATCAAGACAAAGAATGTGAACCTTGCTACCAGTCGTAACATCGGTCTGCCCCAATGT AAGGGTGACATCATCCTTCAGACAGACGATGATGCGGAACCATTCCCCAACTGGATTGAACGCCTTGTTGATGAACATCA AAAACATCCCGAAGCCGGCGTAATTGGCGGAAATGTGGTGGATGCTTCTGGCGAAGGATTAATCTTCAAAATTGCAGATG CTACTACATTTACACATTTCAATGAAGAAGGCTATTGTGAGACAAGGACTGTACCAGGAGTGAACTCATCATACAAACGA GATACGATAGAAAAAGTTGGGGCGTATGATACCAATATGTTCAGAGGAGAGGATGTGGATTATAATTGGCGTTGTATCAA AGCAGGCTACAAGGTTCTTTCATTTCCTGACATTAAGGTTTATCATCACCATCGTGCCACATGGAAAGGACTTTACAACC AGCAGTATATGTATGGACGTGCCTACTTGTTGGTACGAAGAAAATGGAAAGATATGTATTGCTGCTACCCACATGGCATA TACAATTTGCGTGACCTTGCTAAGTTCTGTTATTTCTGTATTGTGCCATTCGTTGACCAAGCACACAAATTGAAGCATGT GAAAGGTTTCTTCAATAAACTGATAGCCTACCCCATTATGGTGACTATCGGATATAATTGGCACAGGGGAGTGTTCGTGC AGTATTTCAAAGAATTGAAAAAATGA
Upstream 100 bases:
>100_bases CTTCTTCGGTCAAAATCATATGCTGCCCGCAAAGCCAGTGAAAAATTTTCTTGGAACTGTATTGTCAATCAATATATAGA ATTAGTTAAATAATTATTGT
Downstream 100 bases:
>100_bases AATCGAAAACTATCTATATTTTTGCCAACTCCTATAAACCTGTTCTTGGAGGCGTACAGACTGTGGCTTCGCAATTTGCC GAAGGGTGTAGAAGGCGGGG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Succinoglycan Biosynthesis Protein ExoA; Glycosyl Transferase; Glucosaminyltransferase; N-Glycosyltransferase; Membrane Sugar Transferase; Biofilm PGA Synthesis N-Glycosyltransferase PgaC; Group 2 Family Glycosyltransferase; Glycoside Hydrolase Family 2 Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Sugar Transferase Related Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase AglG; Dolichyl-Phosphate Mannose Synthase-Like Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTVSVFICTYNRGNLIDGTLCAIIERQTRKPDEIVVVNGGGINDCHATIVKWQKLFPTLREIKTKNVNLATSRNIGLPQC KGDIILQTDDDAEPFPNWIERLVDEHQKHPEAGVIGGNVVDASGEGLIFKIADATTFTHFNEEGYCETRTVPGVNSSYKR DTIEKVGAYDTNMFRGEDVDYNWRCIKAGYKVLSFPDIKVYHHHRATWKGLYNQQYMYGRAYLLVRRKWKDMYCCYPHGI YNLRDLAKFCYFCIVPFVDQAHKLKHVKGFFNKLIAYPIMVTIGYNWHRGVFVQYFKELKK
Sequences:
>Translated_301_residues MTVSVFICTYNRGNLIDGTLCAIIERQTRKPDEIVVVNGGGINDCHATIVKWQKLFPTLREIKTKNVNLATSRNIGLPQC KGDIILQTDDDAEPFPNWIERLVDEHQKHPEAGVIGGNVVDASGEGLIFKIADATTFTHFNEEGYCETRTVPGVNSSYKR DTIEKVGAYDTNMFRGEDVDYNWRCIKAGYKVLSFPDIKVYHHHRATWKGLYNQQYMYGRAYLLVRRKWKDMYCCYPHGI YNLRDLAKFCYFCIVPFVDQAHKLKHVKGFFNKLIAYPIMVTIGYNWHRGVFVQYFKELKK >Mature_300_residues TVSVFICTYNRGNLIDGTLCAIIERQTRKPDEIVVVNGGGINDCHATIVKWQKLFPTLREIKTKNVNLATSRNIGLPQCK GDIILQTDDDAEPFPNWIERLVDEHQKHPEAGVIGGNVVDASGEGLIFKIADATTFTHFNEEGYCETRTVPGVNSSYKRD TIEKVGAYDTNMFRGEDVDYNWRCIKAGYKVLSFPDIKVYHHHRATWKGLYNQQYMYGRAYLLVRRKWKDMYCCYPHGIY NLRDLAKFCYFCIVPFVDQAHKLKHVKGFFNKLIAYPIMVTIGYNWHRGVFVQYFKELKK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34831; Mature: 34700
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSVFICTYNRGNLIDGTLCAIIERQTRKPDEIVVVNGGGINDCHATIVKWQKLFPTLR CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH EIKTKNVNLATSRNIGLPQCKGDIILQTDDDAEPFPNWIERLVDEHQKHPEAGVIGGNVV HHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCEEE DASGEGLIFKIADATTFTHFNEEGYCETRTVPGVNSSYKRDTIEKVGAYDTNMFRGEDVD ECCCCEEEEEEECCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC YNWRCIKAGYKVLSFPDIKVYHHHRATWKGLYNQQYMYGRAYLLVRRKWKDMYCCYPHGI CCCEEEECCCEEECCCCEEEEECCCHHHHHHCCCCCHHHHEEEEEECCCCCEEEECCCCC YNLRDLAKFCYFCIVPFVDQAHKLKHVKGFFNKLIAYPIMVTIGYNWHRGVFVQYFKELK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHC K C >Mature Secondary Structure TVSVFICTYNRGNLIDGTLCAIIERQTRKPDEIVVVNGGGINDCHATIVKWQKLFPTLR EEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH EIKTKNVNLATSRNIGLPQCKGDIILQTDDDAEPFPNWIERLVDEHQKHPEAGVIGGNVV HHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCEEE DASGEGLIFKIADATTFTHFNEEGYCETRTVPGVNSSYKRDTIEKVGAYDTNMFRGEDVD ECCCCEEEEEEECCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC YNWRCIKAGYKVLSFPDIKVYHHHRATWKGLYNQQYMYGRAYLLVRRKWKDMYCCYPHGI CCCEEEECCCEEECCCCEEEEECCCHHHHHHCCCCCHHHHEEEEEECCCCCEEEECCCCC YNLRDLAKFCYFCIVPFVDQAHKLKHVKGFFNKLIAYPIMVTIGYNWHRGVFVQYFKELK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA