| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009764
Identifier: 150009764
GI number: 150009764
Start: 3844487
End: 3846115
Strand: Reverse
Name: 150009764
Synonym: BDI_3179
Alternate gene names: NA
Gene position: 3846115-3844487 (Counterclockwise)
Preceding gene: 150009765
Following gene: 150009763
Centisome position: 79.94
GC content: 53.22
Gene sequence:
>1629_bases ATGACAACAAGACGAAACTTCTTAAAGCAATCCCTTCTTGCGGCAGGCGCGGCCTCCGTTCCCGCCGGGAACCTTTTAGC ACAAGAGAAAATGGAAGAGAAACGCCCCAAATACAATCTTCCTTACAAGAACACCTACCTGAAGGAACCCTTCGTGACCG AGAACGAGTTCCGGACGGCGAGACCGGAGACCATCACGCCCGGAACCTTCGAGGAGGCCAAGCAAATCCTCCCGGGCCCG ACTTGGAGCGGACATGAGAAAGAGATCGAGATGTACTGGAAGGCTTGGCAAATCGGCATCGGCAACATCAAGGCCCCGGA ACCGGATTCCGGTTTCGTATGCAGTTACCTTGATGTCGCCTACAACGGCAATATCTTCATGTGGGACTCCGCCTTCATGA TGATGTTCGCCCGTTTCGGTACCCGCTTCTTCCCCTTCCAACGTACGTTAGATAATTTCTACGCCAAACAACATCCGGAC GGTTTCATCTGCCGGGAGATCAAGGCGGACGGAGCGGACTGTTTCGAGCGTTACGATCCGACCAGCACCGGACCGAATAT CCTCCCTTGGAGCGAGATCGTCTATTATAAGCAGTTCGGCGATATAGACCGCCTACACAAGATATTCCCCGCCCTTTGCG CTTATTATAAATGGTTGAAGCTAAACCATACGTGGCGCAACGGTACGTATTGGACCAGCGGTTGGGGTACCGGCATGGAC AACATGCCCCGGGTGGAACCGAAATACAATCCGATATACAGCCACGGCCATATGATCTGGCTGGACGTTTGCTTGCAACA ATACTTCACCGCCGGGCATCTGCTTGAGATGGGTTTCTATCTGGAGCGTTGGCAGGAGATCGAGGAGTTCGAGGACGAGC AGAAGATGCTAAAGAAGTATATCAACGAGAACCTATGGGACGAGAAGGAGCATTTCCTTTTCGATCAATACGCCGACGGA AGCCTTTCCTCCACCAAGGGAATCTACGCGTACTGGGCCTTATTGACCGATGTCCTGTCCAAGGAACGCATGGATGCTTT CGTGGCCGAGCTGGATAACAAGGAGACATTCAACCGCCTGCACCGCGTCCCTTCCCTTGCCGCCAACCATCCTAAATACA AGGATAACGGCCGCTACTGGCAGGGTGGCGTATGGCCGGGAGCGAACTATATGGTGATTACCGGCCTATTGCAACAAGGC TATCGTAAATTGGCTTACGAGATCGCACGCAACCATTACGATAACGTCCTAAAGGTGTATAAGAATACCGGTACGTTCTG GGAATACTACGCTCCGGAACATGAGGAGCCGGGCTTCATGGCTCGCCCGAATTTCGTGGGCTGGGGCGGACTGGCACCGA TCTCCGGCTTGATCGAGCAAATCTTCGGCATCCGCTCCAATGTGTACGAGAAGAAATTGACCGTAGACGTGAACTTGACG GAGGCTTATGGTATCGACCGTTATCCTTTCGGCCTCGACGGTCTGGTAGCGATCAAAGTCAAGGCCCGTTCTTCCGCTAC CCAAGAGCCGCAGGTAGAAATTACCAGCGACGTCCCCTTGGAACTAACCGTCCTTTGGGGCGACAAACAGAAGACGGCTA ACGTAAAACCCGGCACGCAAACCGTATAA
Upstream 100 bases:
>100_bases CAGTACTTGACTAGCAGTACTACGGTACCCGACCGGGAGGACTGTGTTCACCGACTGAGGCGCGCCTTCTCCCTCTCTCC CCCAATAAATATCATAAAGA
Downstream 100 bases:
>100_bases AACAGTAAATCCATCAAACATCCAGTTGTAGAGACGGGGCACGCCCCGTCTCTACAACTAGACTCAAAAAACAATTAGTA TATGAAACAGATTCTATCCT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTTRRNFLKQSLLAAGAASVPAGNLLAQEKMEEKRPKYNLPYKNTYLKEPFVTENEFRTARPETITPGTFEEAKQILPGP TWSGHEKEIEMYWKAWQIGIGNIKAPEPDSGFVCSYLDVAYNGNIFMWDSAFMMMFARFGTRFFPFQRTLDNFYAKQHPD GFICREIKADGADCFERYDPTSTGPNILPWSEIVYYKQFGDIDRLHKIFPALCAYYKWLKLNHTWRNGTYWTSGWGTGMD NMPRVEPKYNPIYSHGHMIWLDVCLQQYFTAGHLLEMGFYLERWQEIEEFEDEQKMLKKYINENLWDEKEHFLFDQYADG SLSSTKGIYAYWALLTDVLSKERMDAFVAELDNKETFNRLHRVPSLAANHPKYKDNGRYWQGGVWPGANYMVITGLLQQG YRKLAYEIARNHYDNVLKVYKNTGTFWEYYAPEHEEPGFMARPNFVGWGGLAPISGLIEQIFGIRSNVYEKKLTVDVNLT EAYGIDRYPFGLDGLVAIKVKARSSATQEPQVEITSDVPLELTVLWGDKQKTANVKPGTQTV
Sequences:
>Translated_542_residues MTTRRNFLKQSLLAAGAASVPAGNLLAQEKMEEKRPKYNLPYKNTYLKEPFVTENEFRTARPETITPGTFEEAKQILPGP TWSGHEKEIEMYWKAWQIGIGNIKAPEPDSGFVCSYLDVAYNGNIFMWDSAFMMMFARFGTRFFPFQRTLDNFYAKQHPD GFICREIKADGADCFERYDPTSTGPNILPWSEIVYYKQFGDIDRLHKIFPALCAYYKWLKLNHTWRNGTYWTSGWGTGMD NMPRVEPKYNPIYSHGHMIWLDVCLQQYFTAGHLLEMGFYLERWQEIEEFEDEQKMLKKYINENLWDEKEHFLFDQYADG SLSSTKGIYAYWALLTDVLSKERMDAFVAELDNKETFNRLHRVPSLAANHPKYKDNGRYWQGGVWPGANYMVITGLLQQG YRKLAYEIARNHYDNVLKVYKNTGTFWEYYAPEHEEPGFMARPNFVGWGGLAPISGLIEQIFGIRSNVYEKKLTVDVNLT EAYGIDRYPFGLDGLVAIKVKARSSATQEPQVEITSDVPLELTVLWGDKQKTANVKPGTQTV >Mature_541_residues TTRRNFLKQSLLAAGAASVPAGNLLAQEKMEEKRPKYNLPYKNTYLKEPFVTENEFRTARPETITPGTFEEAKQILPGPT WSGHEKEIEMYWKAWQIGIGNIKAPEPDSGFVCSYLDVAYNGNIFMWDSAFMMMFARFGTRFFPFQRTLDNFYAKQHPDG FICREIKADGADCFERYDPTSTGPNILPWSEIVYYKQFGDIDRLHKIFPALCAYYKWLKLNHTWRNGTYWTSGWGTGMDN MPRVEPKYNPIYSHGHMIWLDVCLQQYFTAGHLLEMGFYLERWQEIEEFEDEQKMLKKYINENLWDEKEHFLFDQYADGS LSSTKGIYAYWALLTDVLSKERMDAFVAELDNKETFNRLHRVPSLAANHPKYKDNGRYWQGGVWPGANYMVITGLLQQGY RKLAYEIARNHYDNVLKVYKNTGTFWEYYAPEHEEPGFMARPNFVGWGGLAPISGLIEQIFGIRSNVYEKKLTVDVNLTE AYGIDRYPFGLDGLVAIKVKARSSATQEPQVEITSDVPLELTVLWGDKQKTANVKPGTQTV
Specific function: Unknown
COG id: COG1626
COG function: function code G; Neutral trehalase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR001661 [H]
Pfam domain/function: PF01204 Trehalase [H]
EC number: NA
Molecular weight: Translated: 62818; Mature: 62687
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRRNFLKQSLLAAGAASVPAGNLLAQEKMEEKRPKYNLPYKNTYLKEPFVTENEFRTA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RPETITPGTFEEAKQILPGPTWSGHEKEIEMYWKAWQIGIGNIKAPEPDSGFVCSYLDVA CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEE YNGNIFMWDSAFMMMFARFGTRFFPFQRTLDNFYAKQHPDGFICREIKADGADCFERYDP ECCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCC TSTGPNILPWSEIVYYKQFGDIDRLHKIFPALCAYYKWLKLNHTWRNGTYWTSGWGTGMD CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCC NMPRVEPKYNPIYSHGHMIWLDVCLQQYFTAGHLLEMGFYLERWQEIEEFEDEQKMLKKY CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INENLWDEKEHFLFDQYADGSLSSTKGIYAYWALLTDVLSKERMDAFVAELDNKETFNRL HCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HRVPSLAANHPKYKDNGRYWQGGVWPGANYMVITGLLQQGYRKLAYEIARNHYDNVLKVY HHCCHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNTGTFWEYYAPEHEEPGFMARPNFVGWGGLAPISGLIEQIFGIRSNVYEKKLTVDVNLT HCCCCEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEH EAYGIDRYPFGLDGLVAIKVKARSSATQEPQVEITSDVPLELTVLWGDKQKTANVKPGTQ HHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCC TV CC >Mature Secondary Structure TTRRNFLKQSLLAAGAASVPAGNLLAQEKMEEKRPKYNLPYKNTYLKEPFVTENEFRTA CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RPETITPGTFEEAKQILPGPTWSGHEKEIEMYWKAWQIGIGNIKAPEPDSGFVCSYLDVA CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEE YNGNIFMWDSAFMMMFARFGTRFFPFQRTLDNFYAKQHPDGFICREIKADGADCFERYDP ECCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCC TSTGPNILPWSEIVYYKQFGDIDRLHKIFPALCAYYKWLKLNHTWRNGTYWTSGWGTGMD CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCC NMPRVEPKYNPIYSHGHMIWLDVCLQQYFTAGHLLEMGFYLERWQEIEEFEDEQKMLKKY CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INENLWDEKEHFLFDQYADGSLSSTKGIYAYWALLTDVLSKERMDAFVAELDNKETFNRL HCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HRVPSLAANHPKYKDNGRYWQGGVWPGANYMVITGLLQQGYRKLAYEIARNHYDNVLKVY HHCCHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNTGTFWEYYAPEHEEPGFMARPNFVGWGGLAPISGLIEQIFGIRSNVYEKKLTVDVNLT HCCCCEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEH EAYGIDRYPFGLDGLVAIKVKARSSATQEPQVEITSDVPLELTVLWGDKQKTANVKPGTQ HHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCC TV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8978084; 9403685 [H]