Click here to switch to the map view.

The map label for this gene is xynC [H]

Identifier: 150009730

GI number: 150009730

Start: 3801121

End: 3801942

Strand: Direct

Name: xynC [H]

Synonym: BDI_3145

Alternate gene names: 150009730

Gene position: 3801121-3801942 (Clockwise)

Preceding gene: 150009729

Following gene: 150009731

Centisome position: 79.0

GC content: 46.47

Gene sequence:

>822_bases
ATGAATTGGATGAAAAAGGTAGCGGTAGCGTTGGTTTGTTTGCTTCCGCTCGGTTTACAGGCGGCGAAGGTAGATACTTT
GCAAGTGAAAAGTCCTTCGATGAATAAAAGTATAGAGGTAGTCGTGGTAAGTCCGGATGTGGCTGCGACGAAAGCGTGTC
CGGTGATTTATTTGTTACATGGCTATGGCGGTAACGCTCGTACATGGGTCGGTATCAAGCCGGATCTATCTAAGATCGCT
GATGAGAAGGGTATCTTTTTCGTATGCCCGGATGGTAAGAATACGTGGTATTGGGATAGCCCTTTGAACGCTGATGTACG
GTATGAGACTTTCATCTCGGATGAGTTGGTGAAATACGTGGATTCCCATTATAAGACCGTGGCCGATCGTAAGGGACGTG
CTATTACCGGCTTGAGCATGGGTGGACATGGCGCTATGTGGAATGGCCTTCGTCATAGCGATGTTTTCTCCGCTGCGGGA
AGTACTAGCGGTGGCGTGGATATCCGCCCTTTCCCGAAAAACTGGGAGATGAGCGTACAAATAGGTGAGAAGGCAAAATA
TCCGGAAAACTGGGAGAAGTACACGGTTATCAATTTGGTTCCAACCTTGAGGAAAGACCAGATCGCTTTGATCTTCGATT
GCGGTGACAGCGATTTCTTTTTGGAGGTGAATAAGAACTACCACGAGGCGTTATTAAAACAAGGCATCGACCACGACTTT
ATCACTCGCCCGGGTAATCATGATTCACAATACTGGAATAATTCTATTGATTACCAGATCCTCTTTTTCTGGAAGCATTT
CTTGAAGATGAAGGCCTTGTGA

Upstream 100 bases:

>100_bases
TCGTTAAGTAAATAAGTTTTTGGCTGTAAAATCTGTATATTTGTCCCCGTAGTTCCTTGAAAACAAGGCTACGGGGAATT
AATCATTAATGTTCACTGAT

Downstream 100 bases:

>100_bases
TAAGACCGTTTGGCGATTTGACATTCTGACATTTTGTAAACTGAAGTCCCGGAGAACCGATTTTTCCGGGACTATGTACG
ACTCGTTGCCAAATACGCAA

Product: acetyl esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNWMKKVAVALVCLLPLGLQAAKVDTLQVKSPSMNKSIEVVVVSPDVAATKACPVIYLLHGYGGNARTWVGIKPDLSKIA
DEKGIFFVCPDGKNTWYWDSPLNADVRYETFISDELVKYVDSHYKTVADRKGRAITGLSMGGHGAMWNGLRHSDVFSAAG
STSGGVDIRPFPKNWEMSVQIGEKAKYPENWEKYTVINLVPTLRKDQIALIFDCGDSDFFLEVNKNYHEALLKQGIDHDF
ITRPGNHDSQYWNNSIDYQILFFWKHFLKMKAL

Sequences:

>Translated_273_residues
MNWMKKVAVALVCLLPLGLQAAKVDTLQVKSPSMNKSIEVVVVSPDVAATKACPVIYLLHGYGGNARTWVGIKPDLSKIA
DEKGIFFVCPDGKNTWYWDSPLNADVRYETFISDELVKYVDSHYKTVADRKGRAITGLSMGGHGAMWNGLRHSDVFSAAG
STSGGVDIRPFPKNWEMSVQIGEKAKYPENWEKYTVINLVPTLRKDQIALIFDCGDSDFFLEVNKNYHEALLKQGIDHDF
ITRPGNHDSQYWNNSIDYQILFFWKHFLKMKAL
>Mature_273_residues
MNWMKKVAVALVCLLPLGLQAAKVDTLQVKSPSMNKSIEVVVVSPDVAATKACPVIYLLHGYGGNARTWVGIKPDLSKIA
DEKGIFFVCPDGKNTWYWDSPLNADVRYETFISDELVKYVDSHYKTVADRKGRAITGLSMGGHGAMWNGLRHSDVFSAAG
STSGGVDIRPFPKNWEMSVQIGEKAKYPENWEKYTVINLVPTLRKDQIALIFDCGDSDFFLEVNKNYHEALLKQGIDHDF
ITRPGNHDSQYWNNSIDYQILFFWKHFLKMKAL

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 30798; Mature: 30798

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWMKKVAVALVCLLPLGLQAAKVDTLQVKSPSMNKSIEVVVVSPDVAATKACPVIYLLH
CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEE
GYGGNARTWVGIKPDLSKIADEKGIFFVCPDGKNTWYWDSPLNADVRYETFISDELVKYV
CCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCEEECCCCCCCEEEEHHHHHHHHHHH
DSHYKTVADRKGRAITGLSMGGHGAMWNGLRHSDVFSAAGSTSGGVDIRPFPKNWEMSVQ
HHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEE
IGEKAKYPENWEKYTVINLVPTLRKDQIALIFDCGDSDFFLEVNKNYHEALLKQGIDHDF
ECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCCC
ITRPGNHDSQYWNNSIDYQILFFWKHFLKMKAL
CCCCCCCCHHHCCCCCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MNWMKKVAVALVCLLPLGLQAAKVDTLQVKSPSMNKSIEVVVVSPDVAATKACPVIYLLH
CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEE
GYGGNARTWVGIKPDLSKIADEKGIFFVCPDGKNTWYWDSPLNADVRYETFISDELVKYV
CCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCEEECCCCCCCEEEEHHHHHHHHHHH
DSHYKTVADRKGRAITGLSMGGHGAMWNGLRHSDVFSAAGSTSGGVDIRPFPKNWEMSVQ
HHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEE
IGEKAKYPENWEKYTVINLVPTLRKDQIALIFDCGDSDFFLEVNKNYHEALLKQGIDHDF
ECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCCC
ITRPGNHDSQYWNNSIDYQILFFWKHFLKMKAL
CCCCCCCCHHHCCCCCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]