| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009724
Identifier: 150009724
GI number: 150009724
Start: 3788856
End: 3791516
Strand: Direct
Name: 150009724
Synonym: BDI_3139
Alternate gene names: NA
Gene position: 3788856-3791516 (Clockwise)
Preceding gene: 150009723
Following gene: 150009725
Centisome position: 78.75
GC content: 47.99
Gene sequence:
>2661_bases ATGAAATGTATATCTATCTACTTTGTGACCCTATTGTTACTGATGTCGGGCTGTGAATCCGGGCGGAGGTTCATCTTAAA AGATCTTCGTTGTGAGAACTTGGAGAATCCGGTTGCGATCGACAATACCCATCCCCATTTTAGCTGGAAAATCGAGACAG ACGGGCAAACTATGCGGCAAGCGTATTTTGAGATACAAGTAGCCACGGATAGTTCCTTGCTGGCTCAAGGCAAAGCCGAT CTATGGAATTCAGGTAAGGTGGAATCGTCCGCTTCCGTGATGGTCCCTTATCGAGGGAAAGAGTTGCGATCTAGTGTGCT GGCCTATTGGAAAGTCCGGGTATGGGACGATAAGGGGGAATCCTCGGATTGGAGTCCAATCAATCGCTTTGGGATCGGGC TTTTGGATAAAGCGGAATGGCAAGGGAAATATATAGGGATGCCGGATGAGAAGAATCCGATGTTAAGGAATAAGTTCGAG CTTCAAGACCGTGATGCCACATTACTCCTTCATGTAAACTCCTTAGGGTATCATGAGATCTATTTAAATGGGAGGAAGGT ATCGGAAGATGTTCTCTCGCCTGCGGTATCTCAATTAAACAAAAGATCATTATCGGTGACGTACGATCTTACGCCGTACG CAAAGCAGGGAATAAACGACTTATTGCTCTGGTTGGGCCGTGGCTGGTACAGAAAAGCTACTTTTAATGCCGTTCATGAT GGGCCGTTGGTTAAACTGCAATTGGACGAGATTCAAAGAAATGGCGCTACAAGTACGTTACTCGTTACAGATAGCTCTTG GGAAGGCCGGGGAAGTATGTATGGTGAGACCGGTACCGGTACTTGGTATCCCCATCAATTCGGGGGTGAATGTGTGGATG GGCGGAAGGCGTTGCCGGATTTGACAACGGCTACGCTTGACAAACTGGATTGGACGCCGGTATTGGAGGTGGAGGTACCC GGGATAGAGGTAAGTCCCCAAATGTGTGAGCCTAATCGAATACAAGAGATTATCCGTCCCAAAGGAATCAAACAAATAGG GGATAGTATTTGGCTCGTAGATATGGGAAAGGCGTTAAATGGTTGGGTTGAGCTGAGTTTCCCAAAATTACCGGAAGGCC ACCGGGTCCGTATGGAATATACGGATTGGTTAAATGAAAACGAAGATTTCAAGCCACAAGAGGAGAACGGACAGTATGAG GATTGGTATATCGGTTCCGGACAAGGCAAAGAGGTATTCCGAAATAAATTTAACCACCATGCGTTTCAATATATAAGGAT ATCCGGTTTGGCGAAAGCCCCCGAGGAGGTAACCGGCTATCTGATTCATACGGATTATAAGGATGCCTCGTCTTTCGAGT GCTCGGATCCGGACTTGAATGCTATCTATGCGATGATCAAATATACTTTCAAGAACCTAGCTTTCAGTGGTTATATCGTA GACTGCCCGCATTATGAGCGTATGGGATACGGTGGGGATGGAAATGCCTCTTGTAAGAGTTTCCAGACATTGTATGAGGG CTCTTCCGTGTATATGAACTGGATGCAGATGTGGCAGGATTGCATCCGTGAGGATGGGGGTATGCCGCATTGCGTACCGA GTCCATACCCGGCGGGAGGTGGTCCGTATTGGTGTGGCTTTATTATCACGGGATCGTGGCAGACTTATTTGAATTATGGG GATAGCCGTCTGATCGAGCGATATTATCCGGTTATGCGACATTGGTTGCGTTATGTGGATGCGTATACGGTCGATGGATT GCTGAAACGTTGGCCGGATACGGATTATCGGGCATGGTATTTAGGGGATTGGTTGGCTCCGGCGGGTGTCGATTATACGG CGCAGTCATCGGTAGATCTGGTTAGTAACTGCTTTATAAGCGATTGCCTCACTACGATGGAGAAGATCGCGAAGGTATTG GGGAAAGCGGAGGATGCCGCTAAGTATAAAGAGCGTCGCCAACGATTGAACGAGCTTATCCAGAAGACTTTCTATGATCC GGAGAAGAAACAGTACGCTACAGGCTCCCAGATCGATCGGATTTATCCGATGTTGGTCGGCGTGACAGATGAACAGCATA TGCCCGAGGTAAAGGAAGGTTTATATCGAGAGACATTGGAGAATTGCAAAGGGCATATCGGTTCCGGCTTGGTGGGTGTT ACAATCTTGACCGATTGGGCGATAAAGGACGGAGAGGCCGATTTTCTCTATTCCATGCTGAAAAAGAGAGAGCTGCCGGG ATATCTATATATGATCGATCAAGGGGCTTCTACGACTTGGGAATACTGGTCGGGAGAACGTAGTAAGGTTCATAATTGTT TCAATGGCATTGGCGCTTGGTTCTGTCAGGCGGTCGGAGGGATCTTGCCGGATGAGGATGAGCCGGGCTATAAACATTTC TTTATCAAACCTCAGATACCGAATGGCGTGACGTGGGCGAGGGCGGCGAGAGAGACCCCTTACGGTACGGCACGTGTGTC TTGGACTATGGAGAACCGATCGCTTTCCCTCGATCTGGAGATACCGGCGAATAGTATGGCGACCTTTATCGCTCCATTTA ACGTATCGAATTGTGTGTTAGATGGGAATAATGTAGAAATATCGGCGGGTTCGATCCTGTTGGAAAGTGGAAAACACACG CTATCGCTGCCTGCGGAATAG
Upstream 100 bases:
>100_bases GGCTCGCCTTTCTTGTTTAATAAATCTTAATATTTACCGGGGATATAAGTATCGTAAGCCATTAGAAAGTATATTCATGC GTAATGTCAATCTATTTATC
Downstream 100 bases:
>100_bases GAATCATATGATTCCCTTTTTGTTGACTTATGTTAATAGCTGTTTTTTAATTATTACGCCGTAAGTGTTTTATTCTATTG AAGGGTATATAGTATAAAAG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-Rhamnosidase; Alfa-L-Rhamnosidase; Rhamnosidase; Glycoside Hydrolase Family; Hydrolase; Exported Rhamnosidase A; Secreted Hydrolase; Exported Rhamnosidase Protein; Rhamnosidase A; Alpha-L-Rhamnosidase Protein; Secreted Protein; Glycolsyl Hydrolase Family; Alpha-L-Rhamnosidase N-Terminal Domain-Containing Protein; Exported Rhamnosidase; Glycosyl Hydrolase; Alpha-L-Rhamnosidase Family; Basic Proline-Rich Protein; Bacterial Alpha-L-Rhamnosidase Family; Alpha-L-Rhamnosidase Domain-Containing Protein; Alpha-L-Rhamnosidase Domain Protein
Number of amino acids: Translated: 886; Mature: 886
Protein sequence:
>886_residues MKCISIYFVTLLLLMSGCESGRRFILKDLRCENLENPVAIDNTHPHFSWKIETDGQTMRQAYFEIQVATDSSLLAQGKAD LWNSGKVESSASVMVPYRGKELRSSVLAYWKVRVWDDKGESSDWSPINRFGIGLLDKAEWQGKYIGMPDEKNPMLRNKFE LQDRDATLLLHVNSLGYHEIYLNGRKVSEDVLSPAVSQLNKRSLSVTYDLTPYAKQGINDLLLWLGRGWYRKATFNAVHD GPLVKLQLDEIQRNGATSTLLVTDSSWEGRGSMYGETGTGTWYPHQFGGECVDGRKALPDLTTATLDKLDWTPVLEVEVP GIEVSPQMCEPNRIQEIIRPKGIKQIGDSIWLVDMGKALNGWVELSFPKLPEGHRVRMEYTDWLNENEDFKPQEENGQYE DWYIGSGQGKEVFRNKFNHHAFQYIRISGLAKAPEEVTGYLIHTDYKDASSFECSDPDLNAIYAMIKYTFKNLAFSGYIV DCPHYERMGYGGDGNASCKSFQTLYEGSSVYMNWMQMWQDCIREDGGMPHCVPSPYPAGGGPYWCGFIITGSWQTYLNYG DSRLIERYYPVMRHWLRYVDAYTVDGLLKRWPDTDYRAWYLGDWLAPAGVDYTAQSSVDLVSNCFISDCLTTMEKIAKVL GKAEDAAKYKERRQRLNELIQKTFYDPEKKQYATGSQIDRIYPMLVGVTDEQHMPEVKEGLYRETLENCKGHIGSGLVGV TILTDWAIKDGEADFLYSMLKKRELPGYLYMIDQGASTTWEYWSGERSKVHNCFNGIGAWFCQAVGGILPDEDEPGYKHF FIKPQIPNGVTWARAARETPYGTARVSWTMENRSLSLDLEIPANSMATFIAPFNVSNCVLDGNNVEISAGSILLESGKHT LSLPAE
Sequences:
>Translated_886_residues MKCISIYFVTLLLLMSGCESGRRFILKDLRCENLENPVAIDNTHPHFSWKIETDGQTMRQAYFEIQVATDSSLLAQGKAD LWNSGKVESSASVMVPYRGKELRSSVLAYWKVRVWDDKGESSDWSPINRFGIGLLDKAEWQGKYIGMPDEKNPMLRNKFE LQDRDATLLLHVNSLGYHEIYLNGRKVSEDVLSPAVSQLNKRSLSVTYDLTPYAKQGINDLLLWLGRGWYRKATFNAVHD GPLVKLQLDEIQRNGATSTLLVTDSSWEGRGSMYGETGTGTWYPHQFGGECVDGRKALPDLTTATLDKLDWTPVLEVEVP GIEVSPQMCEPNRIQEIIRPKGIKQIGDSIWLVDMGKALNGWVELSFPKLPEGHRVRMEYTDWLNENEDFKPQEENGQYE DWYIGSGQGKEVFRNKFNHHAFQYIRISGLAKAPEEVTGYLIHTDYKDASSFECSDPDLNAIYAMIKYTFKNLAFSGYIV DCPHYERMGYGGDGNASCKSFQTLYEGSSVYMNWMQMWQDCIREDGGMPHCVPSPYPAGGGPYWCGFIITGSWQTYLNYG DSRLIERYYPVMRHWLRYVDAYTVDGLLKRWPDTDYRAWYLGDWLAPAGVDYTAQSSVDLVSNCFISDCLTTMEKIAKVL GKAEDAAKYKERRQRLNELIQKTFYDPEKKQYATGSQIDRIYPMLVGVTDEQHMPEVKEGLYRETLENCKGHIGSGLVGV TILTDWAIKDGEADFLYSMLKKRELPGYLYMIDQGASTTWEYWSGERSKVHNCFNGIGAWFCQAVGGILPDEDEPGYKHF FIKPQIPNGVTWARAARETPYGTARVSWTMENRSLSLDLEIPANSMATFIAPFNVSNCVLDGNNVEISAGSILLESGKHT LSLPAE >Mature_886_residues MKCISIYFVTLLLLMSGCESGRRFILKDLRCENLENPVAIDNTHPHFSWKIETDGQTMRQAYFEIQVATDSSLLAQGKAD LWNSGKVESSASVMVPYRGKELRSSVLAYWKVRVWDDKGESSDWSPINRFGIGLLDKAEWQGKYIGMPDEKNPMLRNKFE LQDRDATLLLHVNSLGYHEIYLNGRKVSEDVLSPAVSQLNKRSLSVTYDLTPYAKQGINDLLLWLGRGWYRKATFNAVHD GPLVKLQLDEIQRNGATSTLLVTDSSWEGRGSMYGETGTGTWYPHQFGGECVDGRKALPDLTTATLDKLDWTPVLEVEVP GIEVSPQMCEPNRIQEIIRPKGIKQIGDSIWLVDMGKALNGWVELSFPKLPEGHRVRMEYTDWLNENEDFKPQEENGQYE DWYIGSGQGKEVFRNKFNHHAFQYIRISGLAKAPEEVTGYLIHTDYKDASSFECSDPDLNAIYAMIKYTFKNLAFSGYIV DCPHYERMGYGGDGNASCKSFQTLYEGSSVYMNWMQMWQDCIREDGGMPHCVPSPYPAGGGPYWCGFIITGSWQTYLNYG DSRLIERYYPVMRHWLRYVDAYTVDGLLKRWPDTDYRAWYLGDWLAPAGVDYTAQSSVDLVSNCFISDCLTTMEKIAKVL GKAEDAAKYKERRQRLNELIQKTFYDPEKKQYATGSQIDRIYPMLVGVTDEQHMPEVKEGLYRETLENCKGHIGSGLVGV TILTDWAIKDGEADFLYSMLKKRELPGYLYMIDQGASTTWEYWSGERSKVHNCFNGIGAWFCQAVGGILPDEDEPGYKHF FIKPQIPNGVTWARAARETPYGTARVSWTMENRSLSLDLEIPANSMATFIAPFNVSNCVLDGNNVEISAGSILLESGKHT LSLPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100575; Mature: 100575
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCISIYFVTLLLLMSGCESGRRFILKDLRCENLENPVAIDNTHPHFSWKIETDGQTMRQ CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCHHHEE AYFEIQVATDSSLLAQGKADLWNSGKVESSASVMVPYRGKELRSSVLAYWKVRVWDDKGE EEEEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHEEEEEEEEECCCCC SSDWSPINRFGIGLLDKAEWQGKYIGMPDEKNPMLRNKFELQDRDATLLLHVNSLGYHEI CCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE YLNGRKVSEDVLSPAVSQLNKRSLSVTYDLTPYAKQGINDLLLWLGRGWYRKATFNAVHD EECCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCHHHHHHHHCCCCEEECCCCEECC GPLVKLQLDEIQRNGATSTLLVTDSSWEGRGSMYGETGTGTWYPHQFGGECVDGRKALPD CCEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTTATLDKLDWTPVLEVEVPGIEVSPQMCEPNRIQEIIRPKGIKQIGDSIWLVDMGKALN HHHHHHHCCCCCEEEEEECCCEECCCCCCCCHHHHHHHCCCCHHHHCCCEEEEECCCCCC GWVELSFPKLPEGHRVRMEYTDWLNENEDFKPQEENGQYEDWYIGSGQGKEVFRNKFNHH CEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCH AFQYIRISGLAKAPEEVTGYLIHTDYKDASSFECSDPDLNAIYAMIKYTFKNLAFSGYIV HEEEEEEECCCCCCHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCEEE DCPHYERMGYGGDGNASCKSFQTLYEGSSVYMNWMQMWQDCIREDGGMPHCVPSPYPAGG ECCCHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GPYWCGFIITGSWQTYLNYGDSRLIERYYPVMRHWLRYVDAYTVDGLLKRWPDTDYRAWY CCEEEEEEEECCHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LGDWLAPAGVDYTAQSSVDLVSNCFISDCLTTMEKIAKVLGKAEDAAKYKERRQRLNELI EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QKTFYDPEKKQYATGSQIDRIYPMLVGVTDEQHMPEVKEGLYRETLENCKGHIGSGLVGV HHHCCCCCHHHCCCCCHHHHHHHHEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEE TILTDWAIKDGEADFLYSMLKKRELPGYLYMIDQGASTTWEYWSGERSKVHNCFNGIGAW EEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHH FCQAVGGILPDEDEPGYKHFFIKPQIPNGVTWARAARETPYGTARVSWTMENRSLSLDLE HHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEECCEEEEEEE IPANSMATFIAPFNVSNCVLDGNNVEISAGSILLESGKHTLSLPAE CCCCCCEEEEECCCCCEEEECCCCEEEECCEEEEECCCCEEECCCC >Mature Secondary Structure MKCISIYFVTLLLLMSGCESGRRFILKDLRCENLENPVAIDNTHPHFSWKIETDGQTMRQ CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCHHHEE AYFEIQVATDSSLLAQGKADLWNSGKVESSASVMVPYRGKELRSSVLAYWKVRVWDDKGE EEEEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHEEEEEEEEECCCCC SSDWSPINRFGIGLLDKAEWQGKYIGMPDEKNPMLRNKFELQDRDATLLLHVNSLGYHEI CCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE YLNGRKVSEDVLSPAVSQLNKRSLSVTYDLTPYAKQGINDLLLWLGRGWYRKATFNAVHD EECCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCHHHHHHHHCCCCEEECCCCEECC GPLVKLQLDEIQRNGATSTLLVTDSSWEGRGSMYGETGTGTWYPHQFGGECVDGRKALPD CCEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTTATLDKLDWTPVLEVEVPGIEVSPQMCEPNRIQEIIRPKGIKQIGDSIWLVDMGKALN HHHHHHHCCCCCEEEEEECCCEECCCCCCCCHHHHHHHCCCCHHHHCCCEEEEECCCCCC GWVELSFPKLPEGHRVRMEYTDWLNENEDFKPQEENGQYEDWYIGSGQGKEVFRNKFNHH CEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCH AFQYIRISGLAKAPEEVTGYLIHTDYKDASSFECSDPDLNAIYAMIKYTFKNLAFSGYIV HEEEEEEECCCCCCHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCEEE DCPHYERMGYGGDGNASCKSFQTLYEGSSVYMNWMQMWQDCIREDGGMPHCVPSPYPAGG ECCCHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GPYWCGFIITGSWQTYLNYGDSRLIERYYPVMRHWLRYVDAYTVDGLLKRWPDTDYRAWY CCEEEEEEEECCHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LGDWLAPAGVDYTAQSSVDLVSNCFISDCLTTMEKIAKVLGKAEDAAKYKERRQRLNELI EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QKTFYDPEKKQYATGSQIDRIYPMLVGVTDEQHMPEVKEGLYRETLENCKGHIGSGLVGV HHHCCCCCHHHCCCCCHHHHHHHHEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEE TILTDWAIKDGEADFLYSMLKKRELPGYLYMIDQGASTTWEYWSGERSKVHNCFNGIGAW EEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHH FCQAVGGILPDEDEPGYKHFFIKPQIPNGVTWARAARETPYGTARVSWTMENRSLSLDLE HHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEECCEEEEEEE IPANSMATFIAPFNVSNCVLDGNNVEISAGSILLESGKHTLSLPAE CCCCCCEEEEECCCCCEEEECCCCEEEECCEEEEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA