| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009654
Identifier: 150009654
GI number: 150009654
Start: 3680988
End: 3682781
Strand: Direct
Name: 150009654
Synonym: BDI_3069
Alternate gene names: NA
Gene position: 3680988-3682781 (Clockwise)
Preceding gene: 150009653
Following gene: 150009656
Centisome position: 76.51
GC content: 49.11
Gene sequence:
>1794_bases ATGAAACTATTATCAAAATATATCTTTTCGGCTTTGTTCTTGGCTGCTTCCGGAGGTTCCGCCACCGCTCAATCCATGCG GGCGAATACGTATTGTAATCCGCTTAATGTGGATTATACGTATATGATTTATAACTCATCGAACAATCTGTCTTACCGTT CGGGTGCGGACCCCGCTGTCGTAGAATTCCGGGGCGAGTATTATATGTTCGTAACCCGTTCGCATGGCTACTGGCATTCG AAAGATTTGTTGAACTGGGATTTTATCACTCCCGGTAAAAACTGGTATCCTCAGGGTTCCAACGCTCCCGCCGCTCATAA TTATAAGGATTCCGTGCTTTATGTGATGGGTGATCCGTCCGGCTCCATGAGCGTTCTTTATACCGATGATCCGAAATCCG GTAATTGGAACGCTACTCCTGCTATACTCCACGACCTACAAGACCCGGATTTATTCATCGATGATGACGGACAAGCTTAT TTATTTTGGGGCTCTTCCAATGTTTATCCGCTTCGGGGCAAGAAACTGAATAAGGATGACCGTTTCTTGATCGAGGGCGA GACGGTCGAGCTTTTCGGCTTGGATATGCCGAAGCACGGCTGGGAACGTTTTGGCGAGAACCATACCGATACGGTATTGG GGGGCTATATGGAAGGTGCTTGGCTGACCAAGCACGACGGTAAATATTATATGCAGTATGCCGCCCCCGGTACGGAATTC AACGTATATGCCGATGGTGTTTATGTGGCGGACTCCCCATTAGGTCCGTATAAATACCAATCGCATAACCCGGTAAGCTA TAAGCCCGGTGGTTTCATGAATGGTGCCGGACACGGAAGTACCTTGGTGGGGCCGGGTGGCAACTATTGGCATTTCGCCT CTATGTCTCTCTCGGCTACGGTGAATTGGGAGCGTCGCCTCTGCATGTATCCTACTTTCTTCGATAAGGAGGGCATTATG TATTGTGATAATAACTTCGGTGATTATCCGCATTACGCTCCCGCCGAGCCGGGAAAGAAAGGAGAGTTTACGGGGTGGAT GTTGCTTTCTTATAAAAAGCCGGTGAAAGCTTCCTCGTATGCGGAGGGTTCCGCTCCCGCCGCGCAAGGATTCACGGAAT CGAACCGTCCCAAGACTTCCGCCAATTTCCTTCCGGCCAACTTGACGGATGAGGAATGTAAGACATTCTGGATGGCTCGC ACGAATGGAGATACCGAATGGGTAGAGATCGATCTGGAGGCTCCCGCTATGGTATATGCCGTGCAAGTGAATTATCATGA TCATCAATCGAATATGTATGGACGTATTCCCGGTTTACGCCACCGTTATGCGGTGGAAGGCTCTTTGGACGGGCAGGATT GGGTAACGTTGGTGGATCGCCGGAATAATTATAAGGATGTCCCGAATGACTACGTACAAGTGGATAATCCGGCTCGTGTC CGTTATGTCCGTTATAAGAATATAGAGGTCCCGACGCCTCATCTGGCGATCTCGGACTTGCGTGTGTTCGGTATCGGTGA GGGCAAGAAACCTGCGACGGTGAAGAACTTCAAGGTCGTTCGCCAAGCGGATCGCCGTGACGCTATGATCACTTGGGACG CTGTCAAAAACAGCCAAGGCTACAACATCCGTTGGGGCATCGCTCCCGATAAACTATACAACTCATGGCTCCTATACGGA AAGAATGAATTACTTTTAAAGAGTCTGTCCACCGACCAGCCTTATTATTTCACCATCGAGGCATTCAACGAGAACGGTGT ATCAGAAGCGACAAAAATACAGGAAGCCCAATAA
Upstream 100 bases:
>100_bases AGCCGAGCCGGGTGATTTCACGGTTTGGGTAGGCTTGAATTCTGCCGACGAGACGAATCAGTCTTCTTTCTCTCTGCGGT AAAAATTAATACATATCAAC
Downstream 100 bases:
>100_bases TCTTCCGGTATCATTTTCAAATGTATTTTGTAGAGATAGGACAATCTGTCTCTACAAAATACATACAATATTCGATTATT TACTTACTAACGGGTATTTA
Product: glycoside hydrolase family beta-glycosidase
Products: NA
Alternate protein names: Endo-1 4-Beta-Xylanase; Glycoside Hydrolase Family; Xylosidase/Arabinosidase; Glycoside Hydrolase Family Beta-Glycosidase; Beta-Xylosidase Glycosyl Hydrolase Family; LOW QUALITY PROTEIN Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Coagulation Factor 5/8 Type Domain-Containing Protein
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MKLLSKYIFSALFLAASGGSATAQSMRANTYCNPLNVDYTYMIYNSSNNLSYRSGADPAVVEFRGEYYMFVTRSHGYWHS KDLLNWDFITPGKNWYPQGSNAPAAHNYKDSVLYVMGDPSGSMSVLYTDDPKSGNWNATPAILHDLQDPDLFIDDDGQAY LFWGSSNVYPLRGKKLNKDDRFLIEGETVELFGLDMPKHGWERFGENHTDTVLGGYMEGAWLTKHDGKYYMQYAAPGTEF NVYADGVYVADSPLGPYKYQSHNPVSYKPGGFMNGAGHGSTLVGPGGNYWHFASMSLSATVNWERRLCMYPTFFDKEGIM YCDNNFGDYPHYAPAEPGKKGEFTGWMLLSYKKPVKASSYAEGSAPAAQGFTESNRPKTSANFLPANLTDEECKTFWMAR TNGDTEWVEIDLEAPAMVYAVQVNYHDHQSNMYGRIPGLRHRYAVEGSLDGQDWVTLVDRRNNYKDVPNDYVQVDNPARV RYVRYKNIEVPTPHLAISDLRVFGIGEGKKPATVKNFKVVRQADRRDAMITWDAVKNSQGYNIRWGIAPDKLYNSWLLYG KNELLLKSLSTDQPYYFTIEAFNENGVSEATKIQEAQ
Sequences:
>Translated_597_residues MKLLSKYIFSALFLAASGGSATAQSMRANTYCNPLNVDYTYMIYNSSNNLSYRSGADPAVVEFRGEYYMFVTRSHGYWHS KDLLNWDFITPGKNWYPQGSNAPAAHNYKDSVLYVMGDPSGSMSVLYTDDPKSGNWNATPAILHDLQDPDLFIDDDGQAY LFWGSSNVYPLRGKKLNKDDRFLIEGETVELFGLDMPKHGWERFGENHTDTVLGGYMEGAWLTKHDGKYYMQYAAPGTEF NVYADGVYVADSPLGPYKYQSHNPVSYKPGGFMNGAGHGSTLVGPGGNYWHFASMSLSATVNWERRLCMYPTFFDKEGIM YCDNNFGDYPHYAPAEPGKKGEFTGWMLLSYKKPVKASSYAEGSAPAAQGFTESNRPKTSANFLPANLTDEECKTFWMAR TNGDTEWVEIDLEAPAMVYAVQVNYHDHQSNMYGRIPGLRHRYAVEGSLDGQDWVTLVDRRNNYKDVPNDYVQVDNPARV RYVRYKNIEVPTPHLAISDLRVFGIGEGKKPATVKNFKVVRQADRRDAMITWDAVKNSQGYNIRWGIAPDKLYNSWLLYG KNELLLKSLSTDQPYYFTIEAFNENGVSEATKIQEAQ >Mature_597_residues MKLLSKYIFSALFLAASGGSATAQSMRANTYCNPLNVDYTYMIYNSSNNLSYRSGADPAVVEFRGEYYMFVTRSHGYWHS KDLLNWDFITPGKNWYPQGSNAPAAHNYKDSVLYVMGDPSGSMSVLYTDDPKSGNWNATPAILHDLQDPDLFIDDDGQAY LFWGSSNVYPLRGKKLNKDDRFLIEGETVELFGLDMPKHGWERFGENHTDTVLGGYMEGAWLTKHDGKYYMQYAAPGTEF NVYADGVYVADSPLGPYKYQSHNPVSYKPGGFMNGAGHGSTLVGPGGNYWHFASMSLSATVNWERRLCMYPTFFDKEGIM YCDNNFGDYPHYAPAEPGKKGEFTGWMLLSYKKPVKASSYAEGSAPAAQGFTESNRPKTSANFLPANLTDEECKTFWMAR TNGDTEWVEIDLEAPAMVYAVQVNYHDHQSNMYGRIPGLRHRYAVEGSLDGQDWVTLVDRRNNYKDVPNDYVQVDNPARV RYVRYKNIEVPTPHLAISDLRVFGIGEGKKPATVKNFKVVRQADRRDAMITWDAVKNSQGYNIRWGIAPDKLYNSWLLYG KNELLLKSLSTDQPYYFTIEAFNENGVSEATKIQEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67494; Mature: 67494
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50022 FA58C_3 ; PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLSKYIFSALFLAASGGSATAQSMRANTYCNPLNVDYTYMIYNSSNNLSYRSGADPAV CHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEE VEFRGEYYMFVTRSHGYWHSKDLLNWDFITPGKNWYPQGSNAPAAHNYKDSVLYVMGDPS EEECCCEEEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCC GSMSVLYTDDPKSGNWNATPAILHDLQDPDLFIDDDGQAYLFWGSSNVYPLRGKKLNKDD CCEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEECCCCEEEEECCCCEEECCCCCCCCCC RFLIEGETVELFGLDMPKHGWERFGENHTDTVLGGYMEGAWLTKHDGKYYMQYAAPGTEF CEEEECCEEEEEECCCCCHHHHHHCCCCCCCEEECCCCCCEEEECCCEEEEEEECCCCEE NVYADGVYVADSPLGPYKYQSHNPVSYKPGGFMNGAGHGSTLVGPGGNYWHFASMSLSAT EEEECEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEEE VNWERRLCMYPTFFDKEGIMYCDNNFGDYPHYAPAEPGKKGEFTGWMLLSYKKPVKASSY ECCCCEEEECCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC AEGSAPAAQGFTESNRPKTSANFLPANLTDEECKTFWMARTNGDTEWVEIDLEAPAMVYA CCCCCCHHCCCCCCCCCCCCCCEECCCCCHHHHEEEEEEECCCCCEEEEEEECCCEEEEE VQVNYHDHQSNMYGRIPGLRHRYAVEGSLDGQDWVTLVDRRNNYKDVPNDYVQVDNPARV EEEEEECCCCCCEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEE RYVRYKNIEVPTPHLAISDLRVFGIGEGKKPATVKNFKVVRQADRRDAMITWDAVKNSQG EEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHCCCCCEEEEEEHHCCCCC YNIRWGIAPDKLYNSWLLYGKNELLLKSLSTDQPYYFTIEAFNENGVSEATKIQEAQ CEEEEECCHHHHCCCEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHCCCC >Mature Secondary Structure MKLLSKYIFSALFLAASGGSATAQSMRANTYCNPLNVDYTYMIYNSSNNLSYRSGADPAV CHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEE VEFRGEYYMFVTRSHGYWHSKDLLNWDFITPGKNWYPQGSNAPAAHNYKDSVLYVMGDPS EEECCCEEEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCC GSMSVLYTDDPKSGNWNATPAILHDLQDPDLFIDDDGQAYLFWGSSNVYPLRGKKLNKDD CCEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEECCCCEEEEECCCCEEECCCCCCCCCC RFLIEGETVELFGLDMPKHGWERFGENHTDTVLGGYMEGAWLTKHDGKYYMQYAAPGTEF CEEEECCEEEEEECCCCCHHHHHHCCCCCCCEEECCCCCCEEEECCCEEEEEEECCCCEE NVYADGVYVADSPLGPYKYQSHNPVSYKPGGFMNGAGHGSTLVGPGGNYWHFASMSLSAT EEEECEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEEE VNWERRLCMYPTFFDKEGIMYCDNNFGDYPHYAPAEPGKKGEFTGWMLLSYKKPVKASSY ECCCCEEEECCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC AEGSAPAAQGFTESNRPKTSANFLPANLTDEECKTFWMARTNGDTEWVEIDLEAPAMVYA CCCCCCHHCCCCCCCCCCCCCCEECCCCCHHHHEEEEEEECCCCCEEEEEEECCCEEEEE VQVNYHDHQSNMYGRIPGLRHRYAVEGSLDGQDWVTLVDRRNNYKDVPNDYVQVDNPARV EEEEEECCCCCCEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEE RYVRYKNIEVPTPHLAISDLRVFGIGEGKKPATVKNFKVVRQADRRDAMITWDAVKNSQG EEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHCCCCCEEEEEEHHCCCCC YNIRWGIAPDKLYNSWLLYGKNELLLKSLSTDQPYYFTIEAFNENGVSEATKIQEAQ CEEEEECCHHHHCCCEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA